Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446745

Identifier: 46446745

GI number: 46446745

Start: 1331034

End: 1331996

Strand: Direct

Name: 46446745

Synonym: pc1111

Alternate gene names: NA

Gene position: 1331034-1331996 (Clockwise)

Preceding gene: 46446744

Following gene: 46446746

Centisome position: 55.13

GC content: 37.8

Gene sequence:

>963_bases
ATGTCAGTTAAAAAATCTGAGCTTCTATCATCTGTTTATGTGACTCACTCTACTGAAATTGAATCTGGTGAATCCCAGAC
TAACCACAGAAAAAGCAAAACTATTCATGAATTATTTCATTCAGATACTTTGGAGATCGGCGAAAACACAGATTCTTTGA
AGGCAACTGAACAAGTTAGCTATCAATGTTTTTTTTCAAAAGCCATGAACATTCAATCGACCCATACTCCATCTGATGAG
GATATTCGTAGAGCTGCCCCCATCCATCCTATTCCTGAAATAGATAAACCTGCTTTTTTTCAGGAAGCAAGTTTAGAGGG
ATTTGTGCCTAAAATAACGAGTCATTCTCAAATATCAAATCTTCCTTCCAAAGACTTACTTAGAAACTTGGCACAAATGG
AAAGTAAAACAATTGATCAAGTGATGGCAATTGTTTTAAAAGCTCAACTAGAACTGGAAAGAGATCAGGCAGAAATTTCG
CAAAACTCCTTTGATCAATTACAAAACCTACGCAAGATTCAAGAACGAACGTTAGAGGAAATTAAAGAAGCACTCAAAAA
AGATGAAAAGCTTGCGGGTTATTTAGATACAGCACAAAAAATAGCGATTGCAGCGACTTTTATCTGTGGGGTGGCAGCGA
TGGTTATCACTCTGAGTTTTAGCATGCCCATCTTGACCGGGGCCGCAACAGCTTTGGCTATACCCGCCAAAATGGGAGCA
TTCTTCACAGGTTTACTGACTGCTTTTTCAGCTGGTGGAAAAGGCTATATCAATGCAAAGAGCAACCAAACAAAAGGAGT
ATTAACTTCTCATAAACATGATATTGAATTAACAAAAGGTTGGACGGACGACTACCGTGAAAAAATGGGCACTATCGCCG
AAACTGACGCCTATTTCAAAGAAATGTTAATTAAACTTATCAAAAGTCTGGAAAGAATGAGAAGAAATGTTTCTGCAACT
TAA

Upstream 100 bases:

>100_bases
GGCTCGTTTGAGTGCTCCTCAAAATGCACAAATATTAAAACATGTCGCTCTCATGAAAACTCAATGGGAAAGCAGCCCTA
AAAACAATTAGGATTTTATT

Downstream 100 bases:

>100_bases
AATTAATTTAATGATAAAATAAGGAGTCTTTATGACTATTAAAGTTGAAAGTATTACAAGGACGACTGAAGTAGGTCAAG
GAACAAACCTCCCAAGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSVKKSELLSSVYVTHSTEIESGESQTNHRKSKTIHELFHSDTLEIGENTDSLKATEQVSYQCFFSKAMNIQSTHTPSDE
DIRRAAPIHPIPEIDKPAFFQEASLEGFVPKITSHSQISNLPSKDLLRNLAQMESKTIDQVMAIVLKAQLELERDQAEIS
QNSFDQLQNLRKIQERTLEEIKEALKKDEKLAGYLDTAQKIAIAATFICGVAAMVITLSFSMPILTGAATALAIPAKMGA
FFTGLLTAFSAGGKGYINAKSNQTKGVLTSHKHDIELTKGWTDDYREKMGTIAETDAYFKEMLIKLIKSLERMRRNVSAT

Sequences:

>Translated_320_residues
MSVKKSELLSSVYVTHSTEIESGESQTNHRKSKTIHELFHSDTLEIGENTDSLKATEQVSYQCFFSKAMNIQSTHTPSDE
DIRRAAPIHPIPEIDKPAFFQEASLEGFVPKITSHSQISNLPSKDLLRNLAQMESKTIDQVMAIVLKAQLELERDQAEIS
QNSFDQLQNLRKIQERTLEEIKEALKKDEKLAGYLDTAQKIAIAATFICGVAAMVITLSFSMPILTGAATALAIPAKMGA
FFTGLLTAFSAGGKGYINAKSNQTKGVLTSHKHDIELTKGWTDDYREKMGTIAETDAYFKEMLIKLIKSLERMRRNVSAT
>Mature_319_residues
SVKKSELLSSVYVTHSTEIESGESQTNHRKSKTIHELFHSDTLEIGENTDSLKATEQVSYQCFFSKAMNIQSTHTPSDED
IRRAAPIHPIPEIDKPAFFQEASLEGFVPKITSHSQISNLPSKDLLRNLAQMESKTIDQVMAIVLKAQLELERDQAEISQ
NSFDQLQNLRKIQERTLEEIKEALKKDEKLAGYLDTAQKIAIAATFICGVAAMVITLSFSMPILTGAATALAIPAKMGAF
FTGLLTAFSAGGKGYINAKSNQTKGVLTSHKHDIELTKGWTDDYREKMGTIAETDAYFKEMLIKLIKSLERMRRNVSAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35576; Mature: 35445

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKKSELLSSVYVTHSTEIESGESQTNHRKSKTIHELFHSDTLEIGENTDSLKATEQVS
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHH
YQCFFSKAMNIQSTHTPSDEDIRRAAPIHPIPEIDKPAFFQEASLEGFVPKITSHSQISN
HHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHC
LPSKDLLRNLAQMESKTIDQVMAIVLKAQLELERDQAEISQNSFDQLQNLRKIQERTLEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKEALKKDEKLAGYLDTAQKIAIAATFICGVAAMVITLSFSMPILTGAATALAIPAKMGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFTGLLTAFSAGGKGYINAKSNQTKGVLTSHKHDIELTKGWTDDYREKMGTIAETDAYFK
HHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCHHHHHHHHH
EMLIKLIKSLERMRRNVSAT
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVKKSELLSSVYVTHSTEIESGESQTNHRKSKTIHELFHSDTLEIGENTDSLKATEQVS
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHH
YQCFFSKAMNIQSTHTPSDEDIRRAAPIHPIPEIDKPAFFQEASLEGFVPKITSHSQISN
HHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHC
LPSKDLLRNLAQMESKTIDQVMAIVLKAQLELERDQAEISQNSFDQLQNLRKIQERTLEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKEALKKDEKLAGYLDTAQKIAIAATFICGVAAMVITLSFSMPILTGAATALAIPAKMGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFTGLLTAFSAGGKGYINAKSNQTKGVLTSHKHDIELTKGWTDDYREKMGTIAETDAYFK
HHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCHHHHHHHHH
EMLIKLIKSLERMRRNVSAT
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA