Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446731

Identifier: 46446731

GI number: 46446731

Start: 1315713

End: 1317803

Strand: Direct

Name: 46446731

Synonym: pc1097

Alternate gene names: NA

Gene position: 1315713-1317803 (Clockwise)

Preceding gene: 46446730

Following gene: 46446732

Centisome position: 54.49

GC content: 33.86

Gene sequence:

>2091_bases
ATGATAAAAAACGATTCTAGTTTTTCAGATGTTCCTCGTAGCTATCAGACTAACTGCGAGCATGTGATTCAAAATAAAAT
TCAACTCGACAAGATTTACGAACAACTTAAAACATCAAAAAACAGTAAAGAATTTGTTATCATGCATGATGCATTAACAA
AGTTAGACCATAGCATGGCAAAACTTAAAGAAGATATCGAAAAAATTAAAATAATTTCTAAAGATGACGAGTTATCTAAA
AAAGTTTGGAATACTGCGAATTCTCAAGATATTTTCACAGCATTAGATTCTAGCAGGTTACTCATTCAAAATGCACAAGA
AAGTTATCAATTATCTCTACAAATTCTTCAAAGCCACATGCCTTCTTCATTGCATACAACCGAACCAAAAAATGAACTCA
GCAATAGCTATGTCCTTTTTGATAAGTTATGGCAAAAAGAGAACGTTCTTCCTGAATCTTTCCTAGAGGTGGGTCAATCT
TTAGTTGAATTATATCAAAAAAATCCCACACAGCTAGAGCTTCTCACTAGAGCGCATCAATGCTGGGAAAAAGCTGCGGA
ATTATACGAAAAAAAGAAAAATTATAGCCAAGCTTTTGAAATTCGCGCAAAAATTGCAAACGAAATAACAATCCCCCATA
CCCATCCTCTTTATGAATTAGAATCCAAAGTTGATGACTATGTAAAAAACGCTAATATTACTCCGGATGATGGGGCTAAA
TTTGATCATTTAGATTCAGGTATATTAAAGCGTGGAATGTTATCCATTAGAAAACGTAATTTGGATGGAAAAGAAAAATT
AGTGGCTAATTTCCATATCAGTCATTTTGCTAAGGAAAAACTACTCAGCACGATAAAAGCTATTCGCGAAAACAAAGAAG
AATTTATTAAAAACTTGCCAGAACATTTGAAAAGCCAGTTAACGATACGCGATGTGGATAATGGATATTTTAAAAAAATA
AGCGATGTCTACAGCAGTGACATCAGTCAAGGGATGAGGCTAGGAAAAGCAATAGAAATTGAATTCAAAGATATTGGAGT
GATTCGCGTTGCTGCAGATAATGAATTTCACTCTATGCGTGATCGTATCGTAATTGAAGTTAATAAAAACACCTCTTCAG
GGTTAGAACAAATGAGCGAAATTTCCACCGTGATGGGATTAGGGCCTATTTTTGGAGTTGAAAGTTTGGAAGAAGAAGAA
AGAAAAAAGATTATGTTGCTCTTTCGTACATTTTATCCTCAAGAAGCCTATCCATTAGAGAATTTGCAAGACACATACGA
AATTTCTATCGAAAGCCTTAAACAAATGATAATTGACCGACAACCAGATATGAAGGAAGTTTTTAAAGATTATTTATCAG
GTGAAGGAAGGATGAAAAAAGTAGAAATTGCTCCCAATGCTTCTGTATGGAGCGTATCTAATTTAGCAGATTTAATGCGT
CACGAAGGAGCAATTGGCTTAATGGCTGGTTTTACAGGTGATCCAGAAGTTTTAGTATCTGTGCTGACCCAAGGTTCTTT
ATGTTCTCAGGAAAGATTTGAGAAAGGCCATAACTTTGATGGAACAAGTGCTGGACAAGATCATAGACATGGAGGAGCAG
GTTTTGTTTTTAGTCGGTTAATTAATCAAAAAATGGTAAATACACTTCGGGAAGAATTGATAGAATCGACTGGAAGTTAT
GAAGAGAGGCCTAGCAGTCTTATCCAACGCTATCCACATTACGGAGAATATCAGTTACTTTATGATCTTTCAGTTATTAA
TACTGGAGCTTATGCCTATAATCAAGATCGCTATGGAAGTAAGTCTATAGAACACTATGGTAAACGAAATAACCTCATCG
AATTTACAAAATCATTAGACGAAAATAGTATAAAAAATGAAGTGATGATTCGGGATCGGCTCCCACCTGATAAACTTCAT
AAAATACTTTTTTCAAGCGAAAATAAAAAACAAATGCTTATTGATGACTTAAAAGATAAAAATCTTATTATAGAAGAAAA
AGGAAAACATTACATAAAAGGTTATAAGAGTAAAAGTATTGAGGAATTATTTGTTGTGGGGAAATATTTTACCAGTGAGA
TGTGGAAATAA

Upstream 100 bases:

>100_bases
ATGTAAAAGAAAAAATCCCTGCTTATTCTAGTATCAGCAAATTTTACAAAATGGCATGCAACTTGCATTTCTGAATAAGA
AATAAAAGAGGCAAACAACC

Downstream 100 bases:

>100_bases
ATAAGGAATGGTGCTTTATGAATAAAATATTTGATGCTGTCTATTATGTAGAGTCTTCCGATCTTGGAAAAGCCTATAAT
CCTGTTGCCATTCAACCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 696; Mature: 696

Protein sequence:

>696_residues
MIKNDSSFSDVPRSYQTNCEHVIQNKIQLDKIYEQLKTSKNSKEFVIMHDALTKLDHSMAKLKEDIEKIKIISKDDELSK
KVWNTANSQDIFTALDSSRLLIQNAQESYQLSLQILQSHMPSSLHTTEPKNELSNSYVLFDKLWQKENVLPESFLEVGQS
LVELYQKNPTQLELLTRAHQCWEKAAELYEKKKNYSQAFEIRAKIANEITIPHTHPLYELESKVDDYVKNANITPDDGAK
FDHLDSGILKRGMLSIRKRNLDGKEKLVANFHISHFAKEKLLSTIKAIRENKEEFIKNLPEHLKSQLTIRDVDNGYFKKI
SDVYSSDISQGMRLGKAIEIEFKDIGVIRVAADNEFHSMRDRIVIEVNKNTSSGLEQMSEISTVMGLGPIFGVESLEEEE
RKKIMLLFRTFYPQEAYPLENLQDTYEISIESLKQMIIDRQPDMKEVFKDYLSGEGRMKKVEIAPNASVWSVSNLADLMR
HEGAIGLMAGFTGDPEVLVSVLTQGSLCSQERFEKGHNFDGTSAGQDHRHGGAGFVFSRLINQKMVNTLREELIESTGSY
EERPSSLIQRYPHYGEYQLLYDLSVINTGAYAYNQDRYGSKSIEHYGKRNNLIEFTKSLDENSIKNEVMIRDRLPPDKLH
KILFSSENKKQMLIDDLKDKNLIIEEKGKHYIKGYKSKSIEELFVVGKYFTSEMWK

Sequences:

>Translated_696_residues
MIKNDSSFSDVPRSYQTNCEHVIQNKIQLDKIYEQLKTSKNSKEFVIMHDALTKLDHSMAKLKEDIEKIKIISKDDELSK
KVWNTANSQDIFTALDSSRLLIQNAQESYQLSLQILQSHMPSSLHTTEPKNELSNSYVLFDKLWQKENVLPESFLEVGQS
LVELYQKNPTQLELLTRAHQCWEKAAELYEKKKNYSQAFEIRAKIANEITIPHTHPLYELESKVDDYVKNANITPDDGAK
FDHLDSGILKRGMLSIRKRNLDGKEKLVANFHISHFAKEKLLSTIKAIRENKEEFIKNLPEHLKSQLTIRDVDNGYFKKI
SDVYSSDISQGMRLGKAIEIEFKDIGVIRVAADNEFHSMRDRIVIEVNKNTSSGLEQMSEISTVMGLGPIFGVESLEEEE
RKKIMLLFRTFYPQEAYPLENLQDTYEISIESLKQMIIDRQPDMKEVFKDYLSGEGRMKKVEIAPNASVWSVSNLADLMR
HEGAIGLMAGFTGDPEVLVSVLTQGSLCSQERFEKGHNFDGTSAGQDHRHGGAGFVFSRLINQKMVNTLREELIESTGSY
EERPSSLIQRYPHYGEYQLLYDLSVINTGAYAYNQDRYGSKSIEHYGKRNNLIEFTKSLDENSIKNEVMIRDRLPPDKLH
KILFSSENKKQMLIDDLKDKNLIIEEKGKHYIKGYKSKSIEELFVVGKYFTSEMWK
>Mature_696_residues
MIKNDSSFSDVPRSYQTNCEHVIQNKIQLDKIYEQLKTSKNSKEFVIMHDALTKLDHSMAKLKEDIEKIKIISKDDELSK
KVWNTANSQDIFTALDSSRLLIQNAQESYQLSLQILQSHMPSSLHTTEPKNELSNSYVLFDKLWQKENVLPESFLEVGQS
LVELYQKNPTQLELLTRAHQCWEKAAELYEKKKNYSQAFEIRAKIANEITIPHTHPLYELESKVDDYVKNANITPDDGAK
FDHLDSGILKRGMLSIRKRNLDGKEKLVANFHISHFAKEKLLSTIKAIRENKEEFIKNLPEHLKSQLTIRDVDNGYFKKI
SDVYSSDISQGMRLGKAIEIEFKDIGVIRVAADNEFHSMRDRIVIEVNKNTSSGLEQMSEISTVMGLGPIFGVESLEEEE
RKKIMLLFRTFYPQEAYPLENLQDTYEISIESLKQMIIDRQPDMKEVFKDYLSGEGRMKKVEIAPNASVWSVSNLADLMR
HEGAIGLMAGFTGDPEVLVSVLTQGSLCSQERFEKGHNFDGTSAGQDHRHGGAGFVFSRLINQKMVNTLREELIESTGSY
EERPSSLIQRYPHYGEYQLLYDLSVINTGAYAYNQDRYGSKSIEHYGKRNNLIEFTKSLDENSIKNEVMIRDRLPPDKLH
KILFSSENKKQMLIDDLKDKNLIIEEKGKHYIKGYKSKSIEELFVVGKYFTSEMWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80182; Mature: 80182

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: PS00036 BZIP_BASIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNDSSFSDVPRSYQTNCEHVIQNKIQLDKIYEQLKTSKNSKEFVIMHDALTKLDHSMA
CCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
KLKEDIEKIKIISKDDELSKKVWNTANSQDIFTALDSSRLLIQNAQESYQLSLQILQSHM
HHHHHHHHHEECCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHC
PSSLHTTEPKNELSNSYVLFDKLWQKENVLPESFLEVGQSLVELYQKNPTQLELLTRAHQ
CCCCCCCCCHHHHCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
CWEKAAELYEKKKNYSQAFEIRAKIANEITIPHTHPLYELESKVDDYVKNANITPDDGAK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
FDHLDSGILKRGMLSIRKRNLDGKEKLVANFHISHFAKEKLLSTIKAIRENKEEFIKNLP
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
EHLKSQLTIRDVDNGYFKKISDVYSSDISQGMRLGKAIEIEFKDIGVIRVAADNEFHSMR
HHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHCC
DRIVIEVNKNTSSGLEQMSEISTVMGLGPIFGVESLEEEERKKIMLLFRTFYPQEAYPLE
CCEEEEECCCCHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
NLQDTYEISIESLKQMIIDRQPDMKEVFKDYLSGEGRMKKVEIAPNASVWSVSNLADLMR
HCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHH
HEGAIGLMAGFTGDPEVLVSVLTQGSLCSQERFEKGHNFDGTSAGQDHRHGGAGFVFSRL
CCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
INQKMVNTLREELIESTGSYEERPSSLIQRYPHYGEYQLLYDLSVINTGAYAYNQDRYGS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCEECCCCCCC
KSIEHYGKRNNLIEFTKSLDENSIKNEVMIRDRLPPDKLHKILFSSENKKQMLIDDLKDK
HHHHHHCCCCCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCCC
NLIIEEKGKHYIKGYKSKSIEELFVVGKYFTSEMWK
CEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKNDSSFSDVPRSYQTNCEHVIQNKIQLDKIYEQLKTSKNSKEFVIMHDALTKLDHSMA
CCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
KLKEDIEKIKIISKDDELSKKVWNTANSQDIFTALDSSRLLIQNAQESYQLSLQILQSHM
HHHHHHHHHEECCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHC
PSSLHTTEPKNELSNSYVLFDKLWQKENVLPESFLEVGQSLVELYQKNPTQLELLTRAHQ
CCCCCCCCCHHHHCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
CWEKAAELYEKKKNYSQAFEIRAKIANEITIPHTHPLYELESKVDDYVKNANITPDDGAK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
FDHLDSGILKRGMLSIRKRNLDGKEKLVANFHISHFAKEKLLSTIKAIRENKEEFIKNLP
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
EHLKSQLTIRDVDNGYFKKISDVYSSDISQGMRLGKAIEIEFKDIGVIRVAADNEFHSMR
HHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHCC
DRIVIEVNKNTSSGLEQMSEISTVMGLGPIFGVESLEEEERKKIMLLFRTFYPQEAYPLE
CCEEEEECCCCHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
NLQDTYEISIESLKQMIIDRQPDMKEVFKDYLSGEGRMKKVEIAPNASVWSVSNLADLMR
HCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHH
HEGAIGLMAGFTGDPEVLVSVLTQGSLCSQERFEKGHNFDGTSAGQDHRHGGAGFVFSRL
CCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
INQKMVNTLREELIESTGSYEERPSSLIQRYPHYGEYQLLYDLSVINTGAYAYNQDRYGS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCEECCCCCCC
KSIEHYGKRNNLIEFTKSLDENSIKNEVMIRDRLPPDKLHKILFSSENKKQMLIDDLKDK
HHHHHHCCCCCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCCC
NLIIEEKGKHYIKGYKSKSIEELFVVGKYFTSEMWK
CEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA