| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446731
Identifier: 46446731
GI number: 46446731
Start: 1315713
End: 1317803
Strand: Direct
Name: 46446731
Synonym: pc1097
Alternate gene names: NA
Gene position: 1315713-1317803 (Clockwise)
Preceding gene: 46446730
Following gene: 46446732
Centisome position: 54.49
GC content: 33.86
Gene sequence:
>2091_bases ATGATAAAAAACGATTCTAGTTTTTCAGATGTTCCTCGTAGCTATCAGACTAACTGCGAGCATGTGATTCAAAATAAAAT TCAACTCGACAAGATTTACGAACAACTTAAAACATCAAAAAACAGTAAAGAATTTGTTATCATGCATGATGCATTAACAA AGTTAGACCATAGCATGGCAAAACTTAAAGAAGATATCGAAAAAATTAAAATAATTTCTAAAGATGACGAGTTATCTAAA AAAGTTTGGAATACTGCGAATTCTCAAGATATTTTCACAGCATTAGATTCTAGCAGGTTACTCATTCAAAATGCACAAGA AAGTTATCAATTATCTCTACAAATTCTTCAAAGCCACATGCCTTCTTCATTGCATACAACCGAACCAAAAAATGAACTCA GCAATAGCTATGTCCTTTTTGATAAGTTATGGCAAAAAGAGAACGTTCTTCCTGAATCTTTCCTAGAGGTGGGTCAATCT TTAGTTGAATTATATCAAAAAAATCCCACACAGCTAGAGCTTCTCACTAGAGCGCATCAATGCTGGGAAAAAGCTGCGGA ATTATACGAAAAAAAGAAAAATTATAGCCAAGCTTTTGAAATTCGCGCAAAAATTGCAAACGAAATAACAATCCCCCATA CCCATCCTCTTTATGAATTAGAATCCAAAGTTGATGACTATGTAAAAAACGCTAATATTACTCCGGATGATGGGGCTAAA TTTGATCATTTAGATTCAGGTATATTAAAGCGTGGAATGTTATCCATTAGAAAACGTAATTTGGATGGAAAAGAAAAATT AGTGGCTAATTTCCATATCAGTCATTTTGCTAAGGAAAAACTACTCAGCACGATAAAAGCTATTCGCGAAAACAAAGAAG AATTTATTAAAAACTTGCCAGAACATTTGAAAAGCCAGTTAACGATACGCGATGTGGATAATGGATATTTTAAAAAAATA AGCGATGTCTACAGCAGTGACATCAGTCAAGGGATGAGGCTAGGAAAAGCAATAGAAATTGAATTCAAAGATATTGGAGT GATTCGCGTTGCTGCAGATAATGAATTTCACTCTATGCGTGATCGTATCGTAATTGAAGTTAATAAAAACACCTCTTCAG GGTTAGAACAAATGAGCGAAATTTCCACCGTGATGGGATTAGGGCCTATTTTTGGAGTTGAAAGTTTGGAAGAAGAAGAA AGAAAAAAGATTATGTTGCTCTTTCGTACATTTTATCCTCAAGAAGCCTATCCATTAGAGAATTTGCAAGACACATACGA AATTTCTATCGAAAGCCTTAAACAAATGATAATTGACCGACAACCAGATATGAAGGAAGTTTTTAAAGATTATTTATCAG GTGAAGGAAGGATGAAAAAAGTAGAAATTGCTCCCAATGCTTCTGTATGGAGCGTATCTAATTTAGCAGATTTAATGCGT CACGAAGGAGCAATTGGCTTAATGGCTGGTTTTACAGGTGATCCAGAAGTTTTAGTATCTGTGCTGACCCAAGGTTCTTT ATGTTCTCAGGAAAGATTTGAGAAAGGCCATAACTTTGATGGAACAAGTGCTGGACAAGATCATAGACATGGAGGAGCAG GTTTTGTTTTTAGTCGGTTAATTAATCAAAAAATGGTAAATACACTTCGGGAAGAATTGATAGAATCGACTGGAAGTTAT GAAGAGAGGCCTAGCAGTCTTATCCAACGCTATCCACATTACGGAGAATATCAGTTACTTTATGATCTTTCAGTTATTAA TACTGGAGCTTATGCCTATAATCAAGATCGCTATGGAAGTAAGTCTATAGAACACTATGGTAAACGAAATAACCTCATCG AATTTACAAAATCATTAGACGAAAATAGTATAAAAAATGAAGTGATGATTCGGGATCGGCTCCCACCTGATAAACTTCAT AAAATACTTTTTTCAAGCGAAAATAAAAAACAAATGCTTATTGATGACTTAAAAGATAAAAATCTTATTATAGAAGAAAA AGGAAAACATTACATAAAAGGTTATAAGAGTAAAAGTATTGAGGAATTATTTGTTGTGGGGAAATATTTTACCAGTGAGA TGTGGAAATAA
Upstream 100 bases:
>100_bases ATGTAAAAGAAAAAATCCCTGCTTATTCTAGTATCAGCAAATTTTACAAAATGGCATGCAACTTGCATTTCTGAATAAGA AATAAAAGAGGCAAACAACC
Downstream 100 bases:
>100_bases ATAAGGAATGGTGCTTTATGAATAAAATATTTGATGCTGTCTATTATGTAGAGTCTTCCGATCTTGGAAAAGCCTATAAT CCTGTTGCCATTCAACCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 696; Mature: 696
Protein sequence:
>696_residues MIKNDSSFSDVPRSYQTNCEHVIQNKIQLDKIYEQLKTSKNSKEFVIMHDALTKLDHSMAKLKEDIEKIKIISKDDELSK KVWNTANSQDIFTALDSSRLLIQNAQESYQLSLQILQSHMPSSLHTTEPKNELSNSYVLFDKLWQKENVLPESFLEVGQS LVELYQKNPTQLELLTRAHQCWEKAAELYEKKKNYSQAFEIRAKIANEITIPHTHPLYELESKVDDYVKNANITPDDGAK FDHLDSGILKRGMLSIRKRNLDGKEKLVANFHISHFAKEKLLSTIKAIRENKEEFIKNLPEHLKSQLTIRDVDNGYFKKI SDVYSSDISQGMRLGKAIEIEFKDIGVIRVAADNEFHSMRDRIVIEVNKNTSSGLEQMSEISTVMGLGPIFGVESLEEEE RKKIMLLFRTFYPQEAYPLENLQDTYEISIESLKQMIIDRQPDMKEVFKDYLSGEGRMKKVEIAPNASVWSVSNLADLMR HEGAIGLMAGFTGDPEVLVSVLTQGSLCSQERFEKGHNFDGTSAGQDHRHGGAGFVFSRLINQKMVNTLREELIESTGSY EERPSSLIQRYPHYGEYQLLYDLSVINTGAYAYNQDRYGSKSIEHYGKRNNLIEFTKSLDENSIKNEVMIRDRLPPDKLH KILFSSENKKQMLIDDLKDKNLIIEEKGKHYIKGYKSKSIEELFVVGKYFTSEMWK
Sequences:
>Translated_696_residues MIKNDSSFSDVPRSYQTNCEHVIQNKIQLDKIYEQLKTSKNSKEFVIMHDALTKLDHSMAKLKEDIEKIKIISKDDELSK KVWNTANSQDIFTALDSSRLLIQNAQESYQLSLQILQSHMPSSLHTTEPKNELSNSYVLFDKLWQKENVLPESFLEVGQS LVELYQKNPTQLELLTRAHQCWEKAAELYEKKKNYSQAFEIRAKIANEITIPHTHPLYELESKVDDYVKNANITPDDGAK FDHLDSGILKRGMLSIRKRNLDGKEKLVANFHISHFAKEKLLSTIKAIRENKEEFIKNLPEHLKSQLTIRDVDNGYFKKI SDVYSSDISQGMRLGKAIEIEFKDIGVIRVAADNEFHSMRDRIVIEVNKNTSSGLEQMSEISTVMGLGPIFGVESLEEEE RKKIMLLFRTFYPQEAYPLENLQDTYEISIESLKQMIIDRQPDMKEVFKDYLSGEGRMKKVEIAPNASVWSVSNLADLMR HEGAIGLMAGFTGDPEVLVSVLTQGSLCSQERFEKGHNFDGTSAGQDHRHGGAGFVFSRLINQKMVNTLREELIESTGSY EERPSSLIQRYPHYGEYQLLYDLSVINTGAYAYNQDRYGSKSIEHYGKRNNLIEFTKSLDENSIKNEVMIRDRLPPDKLH KILFSSENKKQMLIDDLKDKNLIIEEKGKHYIKGYKSKSIEELFVVGKYFTSEMWK >Mature_696_residues MIKNDSSFSDVPRSYQTNCEHVIQNKIQLDKIYEQLKTSKNSKEFVIMHDALTKLDHSMAKLKEDIEKIKIISKDDELSK KVWNTANSQDIFTALDSSRLLIQNAQESYQLSLQILQSHMPSSLHTTEPKNELSNSYVLFDKLWQKENVLPESFLEVGQS LVELYQKNPTQLELLTRAHQCWEKAAELYEKKKNYSQAFEIRAKIANEITIPHTHPLYELESKVDDYVKNANITPDDGAK FDHLDSGILKRGMLSIRKRNLDGKEKLVANFHISHFAKEKLLSTIKAIRENKEEFIKNLPEHLKSQLTIRDVDNGYFKKI SDVYSSDISQGMRLGKAIEIEFKDIGVIRVAADNEFHSMRDRIVIEVNKNTSSGLEQMSEISTVMGLGPIFGVESLEEEE RKKIMLLFRTFYPQEAYPLENLQDTYEISIESLKQMIIDRQPDMKEVFKDYLSGEGRMKKVEIAPNASVWSVSNLADLMR HEGAIGLMAGFTGDPEVLVSVLTQGSLCSQERFEKGHNFDGTSAGQDHRHGGAGFVFSRLINQKMVNTLREELIESTGSY EERPSSLIQRYPHYGEYQLLYDLSVINTGAYAYNQDRYGSKSIEHYGKRNNLIEFTKSLDENSIKNEVMIRDRLPPDKLH KILFSSENKKQMLIDDLKDKNLIIEEKGKHYIKGYKSKSIEELFVVGKYFTSEMWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80182; Mature: 80182
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: PS00036 BZIP_BASIC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNDSSFSDVPRSYQTNCEHVIQNKIQLDKIYEQLKTSKNSKEFVIMHDALTKLDHSMA CCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH KLKEDIEKIKIISKDDELSKKVWNTANSQDIFTALDSSRLLIQNAQESYQLSLQILQSHM HHHHHHHHHEECCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHC PSSLHTTEPKNELSNSYVLFDKLWQKENVLPESFLEVGQSLVELYQKNPTQLELLTRAHQ CCCCCCCCCHHHHCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH CWEKAAELYEKKKNYSQAFEIRAKIANEITIPHTHPLYELESKVDDYVKNANITPDDGAK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC FDHLDSGILKRGMLSIRKRNLDGKEKLVANFHISHFAKEKLLSTIKAIRENKEEFIKNLP CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH EHLKSQLTIRDVDNGYFKKISDVYSSDISQGMRLGKAIEIEFKDIGVIRVAADNEFHSMR HHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHCC DRIVIEVNKNTSSGLEQMSEISTVMGLGPIFGVESLEEEERKKIMLLFRTFYPQEAYPLE CCEEEEECCCCHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHH NLQDTYEISIESLKQMIIDRQPDMKEVFKDYLSGEGRMKKVEIAPNASVWSVSNLADLMR HCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHH HEGAIGLMAGFTGDPEVLVSVLTQGSLCSQERFEKGHNFDGTSAGQDHRHGGAGFVFSRL CCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH INQKMVNTLREELIESTGSYEERPSSLIQRYPHYGEYQLLYDLSVINTGAYAYNQDRYGS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCEECCCCCCC KSIEHYGKRNNLIEFTKSLDENSIKNEVMIRDRLPPDKLHKILFSSENKKQMLIDDLKDK HHHHHHCCCCCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCCC NLIIEEKGKHYIKGYKSKSIEELFVVGKYFTSEMWK CEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKNDSSFSDVPRSYQTNCEHVIQNKIQLDKIYEQLKTSKNSKEFVIMHDALTKLDHSMA CCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH KLKEDIEKIKIISKDDELSKKVWNTANSQDIFTALDSSRLLIQNAQESYQLSLQILQSHM HHHHHHHHHEECCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHC PSSLHTTEPKNELSNSYVLFDKLWQKENVLPESFLEVGQSLVELYQKNPTQLELLTRAHQ CCCCCCCCCHHHHCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH CWEKAAELYEKKKNYSQAFEIRAKIANEITIPHTHPLYELESKVDDYVKNANITPDDGAK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC FDHLDSGILKRGMLSIRKRNLDGKEKLVANFHISHFAKEKLLSTIKAIRENKEEFIKNLP CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH EHLKSQLTIRDVDNGYFKKISDVYSSDISQGMRLGKAIEIEFKDIGVIRVAADNEFHSMR HHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHCC DRIVIEVNKNTSSGLEQMSEISTVMGLGPIFGVESLEEEERKKIMLLFRTFYPQEAYPLE CCEEEEECCCCHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHH NLQDTYEISIESLKQMIIDRQPDMKEVFKDYLSGEGRMKKVEIAPNASVWSVSNLADLMR HCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHH HEGAIGLMAGFTGDPEVLVSVLTQGSLCSQERFEKGHNFDGTSAGQDHRHGGAGFVFSRL CCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH INQKMVNTLREELIESTGSYEERPSSLIQRYPHYGEYQLLYDLSVINTGAYAYNQDRYGS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCEECCCCCCC KSIEHYGKRNNLIEFTKSLDENSIKNEVMIRDRLPPDKLHKILFSSENKKQMLIDDLKDK HHHHHHCCCCCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCCC NLIIEEKGKHYIKGYKSKSIEELFVVGKYFTSEMWK CEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA