Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446726

Identifier: 46446726

GI number: 46446726

Start: 1308400

End: 1310775

Strand: Direct

Name: 46446726

Synonym: pc1092

Alternate gene names: NA

Gene position: 1308400-1310775 (Clockwise)

Preceding gene: 46446725

Following gene: 46446728

Centisome position: 54.19

GC content: 36.36

Gene sequence:

>2376_bases
ATGAACAATTGGACTAGACGTTGTTTTCATTTTTTAGGCGGCGTCTATCTGGCGATTTTTTTGATTAGTGCTCTCGCCTT
AATTGTGATTGCCGGTACAATTTTAGAAACTTATACTAATTCTCACCTCTTCGCCGCTGAATGGACTTATCATAGCCCTT
TCTTTTTAAGTTTACTGGGTTTGATGTTTGTCAATATCCTTATTTCTGCTCTTCGCCGATGGCCTTTTCAAAAAAAGCAT
ATTCCTTTTCTCATTACGCATCTTGGATTATTGATGGTCATTGGAGGAACAATAATTAAACAACAAATGGGAATACAAGG
AAATCTAAGTTTAACAGAAGGAAGTGGAAGCCAAACGCTTTTGATTCCCCATACTTTCGCACTGAAAGTAGAACAATTAA
ATCCTCCTTTTGAAACATCTCGTCAAGAGATTCGCAAAGTGGCTTTAGAAGAAGGACCCCATCTCCATCAATTCGAGCAA
TTTCCCACTTTAAAATTAAAAATTTTAGGACATGCTCCTCATGTCAATGAACAATGGGAAACCTGGATTAAAGGAGAAAA
AGCTTATTTTTCAGGTATTCCTCCTTTTCCTATTCAAAGCTGGCAGACAGACATTCCTTTTCCCAAAGGGATTCTCCTTC
CTTTATCAACCTCTACTTCTGCTTGGCTAGCCTTAGCTTTACGAACAGATCATTTAAAAGAAAGTTTAAAGAATTTTTAT
TTGGAAAATTTAACAGTTCGACTCACTTCCAAAACCCAACCAGACATTGAATTAGAGATTCCTTTGCAACTTGCTTTAGA
AAAAGGAATTTTATTTGAACAAAGAAAGATTCACTTTGATTTGAATTTGAACTTTTCTTCCATTCAAGGATTGGCGCCTC
CAACGCTTAATTTATCTTGGAAAACACCTTCCGATATAGAACAATCCATTCAAATTGCGCTTCAAGGCAATCATTCACTT
TATATGCAATATAAAAACTCATGGACTCTTTCCGCTCCTTTCAATGTTGATTTGATTCGCCCAACCCCTGCCCTTCTCAT
CGTAGAAGATCGGCAAAAAAATACCTATTTATTTGCATTTGATAAATATGGGAGAGTTCATGAAGAATCGTTTAAACAAA
ATCAATTTTATAACTTGATTGCTTATGCACAAGGGCATGGAGGTTATGTTGTTCAAGCAGAAATTCCATTTCCTTCTTTC
CCGGCAAGTCGCCTAGACAAAGAAAAAGCTGATGAATATTTTTTACAGAATCAACTTCAACAAGTTTTTTCTTCAACAAA
CACGCTTATTCCTCCTTTAAAATTATTTCAACAAGCTTGCCAACGGTCTGGGCATAACTTTGTTAATGCCTTTGTGGAAT
TTTTGCATGTCTGGAATGACAGCCACACCCCTCTTTTTTCCTCTTTATCTCTAGCGTCTCCCACTTTACAGGAGTCCCTT
TCTCATTTAAATTGGGAATTAATTCCAAAAGAGGATTATCATGGATGTCAATGGACGTGTCTTTTTTTTGAAGATCTTCA
AAAAACTTTACAAGCTGATCAAGATTTGCTTGTTATTCTGCATGAAAAATCATGGCCTGGTTTGAAAACTTTAGTAACAA
AAGAAAGCAAAAAGGAAATTTTATTAACTCATCTTACCCAACAAATTTTTTCTGCTTCCTCTTATTTACCCCCTCCCCTC
ATTGAAGAAAAAAGTGTGCTCTATCAAGCCCAGCTACTCTCGGCTTATTTTAAAGCCTATGACATTGATTATCATACTTT
AATTCAAAGAGGAGAAGTTGGTGAAGAAAATTATGAACGTTTACACGCGATGCATCCTACAGCGAAAGAAAAAATTTTAT
TAGAGACACCTTTGACTTACTATCATCAAACAAAAGAACCCCTGCAAAAAAAAGAGAATAATCGCCCAGCTCTTTTCTTA
GAGGCTATAGAAAATGAAAAAAAACAAATTGTTTCCCTCGCCTACGATGAGTCAGCAACTGGATTGAAATGGCCCATTTT
AAATGGACAGTACCTTATTCGTTTTCAACCTCAACAAATTTCGCTTCCTTATCGCTTAAGGCTTCGACAAGCAAGGCAAA
TTAATTATCCTCATACGCAACAAACTTATAGTTATGAGGGGGATGTTTTAATTACTAATAATAATCAAGAAGAAAAGGCC
TTAACCTTGAGCATGAATAAGGTTTATGAAACCTGGGACGGATTTCGCTTTTACTTGGCGGGAATGACAACAGCTTCTCC
ACAAACGGCTAATCATGTGCAAATCATTGTCAATCAAGATCCAGCTAAATATCTTTTAACTTATCCAGGTGGATTAATCG
TGACCATAGGGACAGTTCTTCTATTTTGGCTGAAACCTTACCGGAAAAGGGATTAA

Upstream 100 bases:

>100_bases
CCATAAAAATTGTTGGCCCGGCTTCTTTGATTAATAAACAACGTAAAGCTTTTTTTCAGTTTGCTAATAGTTTTGAACTT
ATTGAAGAACTTCCTTCCCC

Downstream 100 bases:

>100_bases
AAGATTTCCTCAAAAAAATTTTTCATGGCAAGCCAAGCTCGATCACACGTTTTAGGCTCATAAAACTTTCCACCTTTTTT
ATCGTTCTCTTCAGGATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 791; Mature: 791

Protein sequence:

>791_residues
MNNWTRRCFHFLGGVYLAIFLISALALIVIAGTILETYTNSHLFAAEWTYHSPFFLSLLGLMFVNILISALRRWPFQKKH
IPFLITHLGLLMVIGGTIIKQQMGIQGNLSLTEGSGSQTLLIPHTFALKVEQLNPPFETSRQEIRKVALEEGPHLHQFEQ
FPTLKLKILGHAPHVNEQWETWIKGEKAYFSGIPPFPIQSWQTDIPFPKGILLPLSTSTSAWLALALRTDHLKESLKNFY
LENLTVRLTSKTQPDIELEIPLQLALEKGILFEQRKIHFDLNLNFSSIQGLAPPTLNLSWKTPSDIEQSIQIALQGNHSL
YMQYKNSWTLSAPFNVDLIRPTPALLIVEDRQKNTYLFAFDKYGRVHEESFKQNQFYNLIAYAQGHGGYVVQAEIPFPSF
PASRLDKEKADEYFLQNQLQQVFSSTNTLIPPLKLFQQACQRSGHNFVNAFVEFLHVWNDSHTPLFSSLSLASPTLQESL
SHLNWELIPKEDYHGCQWTCLFFEDLQKTLQADQDLLVILHEKSWPGLKTLVTKESKKEILLTHLTQQIFSASSYLPPPL
IEEKSVLYQAQLLSAYFKAYDIDYHTLIQRGEVGEENYERLHAMHPTAKEKILLETPLTYYHQTKEPLQKKENNRPALFL
EAIENEKKQIVSLAYDESATGLKWPILNGQYLIRFQPQQISLPYRLRLRQARQINYPHTQQTYSYEGDVLITNNNQEEKA
LTLSMNKVYETWDGFRFYLAGMTTASPQTANHVQIIVNQDPAKYLLTYPGGLIVTIGTVLLFWLKPYRKRD

Sequences:

>Translated_791_residues
MNNWTRRCFHFLGGVYLAIFLISALALIVIAGTILETYTNSHLFAAEWTYHSPFFLSLLGLMFVNILISALRRWPFQKKH
IPFLITHLGLLMVIGGTIIKQQMGIQGNLSLTEGSGSQTLLIPHTFALKVEQLNPPFETSRQEIRKVALEEGPHLHQFEQ
FPTLKLKILGHAPHVNEQWETWIKGEKAYFSGIPPFPIQSWQTDIPFPKGILLPLSTSTSAWLALALRTDHLKESLKNFY
LENLTVRLTSKTQPDIELEIPLQLALEKGILFEQRKIHFDLNLNFSSIQGLAPPTLNLSWKTPSDIEQSIQIALQGNHSL
YMQYKNSWTLSAPFNVDLIRPTPALLIVEDRQKNTYLFAFDKYGRVHEESFKQNQFYNLIAYAQGHGGYVVQAEIPFPSF
PASRLDKEKADEYFLQNQLQQVFSSTNTLIPPLKLFQQACQRSGHNFVNAFVEFLHVWNDSHTPLFSSLSLASPTLQESL
SHLNWELIPKEDYHGCQWTCLFFEDLQKTLQADQDLLVILHEKSWPGLKTLVTKESKKEILLTHLTQQIFSASSYLPPPL
IEEKSVLYQAQLLSAYFKAYDIDYHTLIQRGEVGEENYERLHAMHPTAKEKILLETPLTYYHQTKEPLQKKENNRPALFL
EAIENEKKQIVSLAYDESATGLKWPILNGQYLIRFQPQQISLPYRLRLRQARQINYPHTQQTYSYEGDVLITNNNQEEKA
LTLSMNKVYETWDGFRFYLAGMTTASPQTANHVQIIVNQDPAKYLLTYPGGLIVTIGTVLLFWLKPYRKRD
>Mature_791_residues
MNNWTRRCFHFLGGVYLAIFLISALALIVIAGTILETYTNSHLFAAEWTYHSPFFLSLLGLMFVNILISALRRWPFQKKH
IPFLITHLGLLMVIGGTIIKQQMGIQGNLSLTEGSGSQTLLIPHTFALKVEQLNPPFETSRQEIRKVALEEGPHLHQFEQ
FPTLKLKILGHAPHVNEQWETWIKGEKAYFSGIPPFPIQSWQTDIPFPKGILLPLSTSTSAWLALALRTDHLKESLKNFY
LENLTVRLTSKTQPDIELEIPLQLALEKGILFEQRKIHFDLNLNFSSIQGLAPPTLNLSWKTPSDIEQSIQIALQGNHSL
YMQYKNSWTLSAPFNVDLIRPTPALLIVEDRQKNTYLFAFDKYGRVHEESFKQNQFYNLIAYAQGHGGYVVQAEIPFPSF
PASRLDKEKADEYFLQNQLQQVFSSTNTLIPPLKLFQQACQRSGHNFVNAFVEFLHVWNDSHTPLFSSLSLASPTLQESL
SHLNWELIPKEDYHGCQWTCLFFEDLQKTLQADQDLLVILHEKSWPGLKTLVTKESKKEILLTHLTQQIFSASSYLPPPL
IEEKSVLYQAQLLSAYFKAYDIDYHTLIQRGEVGEENYERLHAMHPTAKEKILLETPLTYYHQTKEPLQKKENNRPALFL
EAIENEKKQIVSLAYDESATGLKWPILNGQYLIRFQPQQISLPYRLRLRQARQINYPHTQQTYSYEGDVLITNNNQEEKA
LTLSMNKVYETWDGFRFYLAGMTTASPQTANHVQIIVNQDPAKYLLTYPGGLIVTIGTVLLFWLKPYRKRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91090; Mature: 91090

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNWTRRCFHFLGGVYLAIFLISALALIVIAGTILETYTNSHLFAAEWTYHSPFFLSLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH
LMFVNILISALRRWPFQKKHIPFLITHLGLLMVIGGTIIKQQMGIQGNLSLTEGSGSQTL
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE
LIPHTFALKVEQLNPPFETSRQEIRKVALEEGPHLHQFEQFPTLKLKILGHAPHVNEQWE
EEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCHHHH
TWIKGEKAYFSGIPPFPIQSWQTDIPFPKGILLPLSTSTSAWLALALRTDHLKESLKNFY
HHHCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHH
LENLTVRLTSKTQPDIELEIPLQLALEKGILFEQRKIHFDLNLNFSSIQGLAPPTLNLSW
HCCEEEEEECCCCCCEEEECCHHHHHHCCCEEEEEEEEEEEECCHHHHCCCCCCCEEEEC
KTPSDIEQSIQIALQGNHSLYMQYKNSWTLSAPFNVDLIRPTPALLIVEDRQKNTYLFAF
CCCHHHHHEEEEEEECCCEEEEEEECCEEEECCCEEEEECCCCEEEEEEECCCCEEEEEE
DKYGRVHEESFKQNQFYNLIAYAQGHGGYVVQAEIPFPSFPASRLDKEKADEYFLQNQLQ
CCCCCHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHH
QVFSSTNTLIPPLKLFQQACQRSGHNFVNAFVEFLHVWNDSHTPLFSSLSLASPTLQESL
HHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHH
SHLNWELIPKEDYHGCQWTCLFFEDLQKTLQADQDLLVILHEKSWPGLKTLVTKESKKEI
HHCCEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCHHHH
LLTHLTQQIFSASSYLPPPLIEEKSVLYQAQLLSAYFKAYDIDYHTLIQRGEVGEENYER
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH
LHAMHPTAKEKILLETPLTYYHQTKEPLQKKENNRPALFLEAIENEKKQIVSLAYDESAT
HHHCCCCCCCCEEEECCHHHHHCCHHHHHHHCCCCCEEEEEHHHCCHHHEEEEEECCCCC
GLKWPILNGQYLIRFQPQQISLPYRLRLRQARQINYPHTQQTYSYEGDVLITNNNQEEKA
CEEEEEECCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHE
LTLSMNKVYETWDGFRFYLAGMTTASPQTANHVQIIVNQDPAKYLLTYPGGLIVTIGTVL
EEEEHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHH
LFWLKPYRKRD
HHHHCHHHCCC
>Mature Secondary Structure
MNNWTRRCFHFLGGVYLAIFLISALALIVIAGTILETYTNSHLFAAEWTYHSPFFLSLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH
LMFVNILISALRRWPFQKKHIPFLITHLGLLMVIGGTIIKQQMGIQGNLSLTEGSGSQTL
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE
LIPHTFALKVEQLNPPFETSRQEIRKVALEEGPHLHQFEQFPTLKLKILGHAPHVNEQWE
EEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCHHHH
TWIKGEKAYFSGIPPFPIQSWQTDIPFPKGILLPLSTSTSAWLALALRTDHLKESLKNFY
HHHCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHH
LENLTVRLTSKTQPDIELEIPLQLALEKGILFEQRKIHFDLNLNFSSIQGLAPPTLNLSW
HCCEEEEEECCCCCCEEEECCHHHHHHCCCEEEEEEEEEEEECCHHHHCCCCCCCEEEEC
KTPSDIEQSIQIALQGNHSLYMQYKNSWTLSAPFNVDLIRPTPALLIVEDRQKNTYLFAF
CCCHHHHHEEEEEEECCCEEEEEEECCEEEECCCEEEEECCCCEEEEEEECCCCEEEEEE
DKYGRVHEESFKQNQFYNLIAYAQGHGGYVVQAEIPFPSFPASRLDKEKADEYFLQNQLQ
CCCCCHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHH
QVFSSTNTLIPPLKLFQQACQRSGHNFVNAFVEFLHVWNDSHTPLFSSLSLASPTLQESL
HHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHH
SHLNWELIPKEDYHGCQWTCLFFEDLQKTLQADQDLLVILHEKSWPGLKTLVTKESKKEI
HHCCEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCHHHH
LLTHLTQQIFSASSYLPPPLIEEKSVLYQAQLLSAYFKAYDIDYHTLIQRGEVGEENYER
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH
LHAMHPTAKEKILLETPLTYYHQTKEPLQKKENNRPALFLEAIENEKKQIVSLAYDESAT
HHHCCCCCCCCEEEECCHHHHHCCHHHHHHHCCCCCEEEEEHHHCCHHHEEEEEECCCCC
GLKWPILNGQYLIRFQPQQISLPYRLRLRQARQINYPHTQQTYSYEGDVLITNNNQEEKA
CEEEEEECCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHE
LTLSMNKVYETWDGFRFYLAGMTTASPQTANHVQIIVNQDPAKYLLTYPGGLIVTIGTVL
EEEEHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHH
LFWLKPYRKRD
HHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA