| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446726
Identifier: 46446726
GI number: 46446726
Start: 1308400
End: 1310775
Strand: Direct
Name: 46446726
Synonym: pc1092
Alternate gene names: NA
Gene position: 1308400-1310775 (Clockwise)
Preceding gene: 46446725
Following gene: 46446728
Centisome position: 54.19
GC content: 36.36
Gene sequence:
>2376_bases ATGAACAATTGGACTAGACGTTGTTTTCATTTTTTAGGCGGCGTCTATCTGGCGATTTTTTTGATTAGTGCTCTCGCCTT AATTGTGATTGCCGGTACAATTTTAGAAACTTATACTAATTCTCACCTCTTCGCCGCTGAATGGACTTATCATAGCCCTT TCTTTTTAAGTTTACTGGGTTTGATGTTTGTCAATATCCTTATTTCTGCTCTTCGCCGATGGCCTTTTCAAAAAAAGCAT ATTCCTTTTCTCATTACGCATCTTGGATTATTGATGGTCATTGGAGGAACAATAATTAAACAACAAATGGGAATACAAGG AAATCTAAGTTTAACAGAAGGAAGTGGAAGCCAAACGCTTTTGATTCCCCATACTTTCGCACTGAAAGTAGAACAATTAA ATCCTCCTTTTGAAACATCTCGTCAAGAGATTCGCAAAGTGGCTTTAGAAGAAGGACCCCATCTCCATCAATTCGAGCAA TTTCCCACTTTAAAATTAAAAATTTTAGGACATGCTCCTCATGTCAATGAACAATGGGAAACCTGGATTAAAGGAGAAAA AGCTTATTTTTCAGGTATTCCTCCTTTTCCTATTCAAAGCTGGCAGACAGACATTCCTTTTCCCAAAGGGATTCTCCTTC CTTTATCAACCTCTACTTCTGCTTGGCTAGCCTTAGCTTTACGAACAGATCATTTAAAAGAAAGTTTAAAGAATTTTTAT TTGGAAAATTTAACAGTTCGACTCACTTCCAAAACCCAACCAGACATTGAATTAGAGATTCCTTTGCAACTTGCTTTAGA AAAAGGAATTTTATTTGAACAAAGAAAGATTCACTTTGATTTGAATTTGAACTTTTCTTCCATTCAAGGATTGGCGCCTC CAACGCTTAATTTATCTTGGAAAACACCTTCCGATATAGAACAATCCATTCAAATTGCGCTTCAAGGCAATCATTCACTT TATATGCAATATAAAAACTCATGGACTCTTTCCGCTCCTTTCAATGTTGATTTGATTCGCCCAACCCCTGCCCTTCTCAT CGTAGAAGATCGGCAAAAAAATACCTATTTATTTGCATTTGATAAATATGGGAGAGTTCATGAAGAATCGTTTAAACAAA ATCAATTTTATAACTTGATTGCTTATGCACAAGGGCATGGAGGTTATGTTGTTCAAGCAGAAATTCCATTTCCTTCTTTC CCGGCAAGTCGCCTAGACAAAGAAAAAGCTGATGAATATTTTTTACAGAATCAACTTCAACAAGTTTTTTCTTCAACAAA CACGCTTATTCCTCCTTTAAAATTATTTCAACAAGCTTGCCAACGGTCTGGGCATAACTTTGTTAATGCCTTTGTGGAAT TTTTGCATGTCTGGAATGACAGCCACACCCCTCTTTTTTCCTCTTTATCTCTAGCGTCTCCCACTTTACAGGAGTCCCTT TCTCATTTAAATTGGGAATTAATTCCAAAAGAGGATTATCATGGATGTCAATGGACGTGTCTTTTTTTTGAAGATCTTCA AAAAACTTTACAAGCTGATCAAGATTTGCTTGTTATTCTGCATGAAAAATCATGGCCTGGTTTGAAAACTTTAGTAACAA AAGAAAGCAAAAAGGAAATTTTATTAACTCATCTTACCCAACAAATTTTTTCTGCTTCCTCTTATTTACCCCCTCCCCTC ATTGAAGAAAAAAGTGTGCTCTATCAAGCCCAGCTACTCTCGGCTTATTTTAAAGCCTATGACATTGATTATCATACTTT AATTCAAAGAGGAGAAGTTGGTGAAGAAAATTATGAACGTTTACACGCGATGCATCCTACAGCGAAAGAAAAAATTTTAT TAGAGACACCTTTGACTTACTATCATCAAACAAAAGAACCCCTGCAAAAAAAAGAGAATAATCGCCCAGCTCTTTTCTTA GAGGCTATAGAAAATGAAAAAAAACAAATTGTTTCCCTCGCCTACGATGAGTCAGCAACTGGATTGAAATGGCCCATTTT AAATGGACAGTACCTTATTCGTTTTCAACCTCAACAAATTTCGCTTCCTTATCGCTTAAGGCTTCGACAAGCAAGGCAAA TTAATTATCCTCATACGCAACAAACTTATAGTTATGAGGGGGATGTTTTAATTACTAATAATAATCAAGAAGAAAAGGCC TTAACCTTGAGCATGAATAAGGTTTATGAAACCTGGGACGGATTTCGCTTTTACTTGGCGGGAATGACAACAGCTTCTCC ACAAACGGCTAATCATGTGCAAATCATTGTCAATCAAGATCCAGCTAAATATCTTTTAACTTATCCAGGTGGATTAATCG TGACCATAGGGACAGTTCTTCTATTTTGGCTGAAACCTTACCGGAAAAGGGATTAA
Upstream 100 bases:
>100_bases CCATAAAAATTGTTGGCCCGGCTTCTTTGATTAATAAACAACGTAAAGCTTTTTTTCAGTTTGCTAATAGTTTTGAACTT ATTGAAGAACTTCCTTCCCC
Downstream 100 bases:
>100_bases AAGATTTCCTCAAAAAAATTTTTCATGGCAAGCCAAGCTCGATCACACGTTTTAGGCTCATAAAACTTTCCACCTTTTTT ATCGTTCTCTTCAGGATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MNNWTRRCFHFLGGVYLAIFLISALALIVIAGTILETYTNSHLFAAEWTYHSPFFLSLLGLMFVNILISALRRWPFQKKH IPFLITHLGLLMVIGGTIIKQQMGIQGNLSLTEGSGSQTLLIPHTFALKVEQLNPPFETSRQEIRKVALEEGPHLHQFEQ FPTLKLKILGHAPHVNEQWETWIKGEKAYFSGIPPFPIQSWQTDIPFPKGILLPLSTSTSAWLALALRTDHLKESLKNFY LENLTVRLTSKTQPDIELEIPLQLALEKGILFEQRKIHFDLNLNFSSIQGLAPPTLNLSWKTPSDIEQSIQIALQGNHSL YMQYKNSWTLSAPFNVDLIRPTPALLIVEDRQKNTYLFAFDKYGRVHEESFKQNQFYNLIAYAQGHGGYVVQAEIPFPSF PASRLDKEKADEYFLQNQLQQVFSSTNTLIPPLKLFQQACQRSGHNFVNAFVEFLHVWNDSHTPLFSSLSLASPTLQESL SHLNWELIPKEDYHGCQWTCLFFEDLQKTLQADQDLLVILHEKSWPGLKTLVTKESKKEILLTHLTQQIFSASSYLPPPL IEEKSVLYQAQLLSAYFKAYDIDYHTLIQRGEVGEENYERLHAMHPTAKEKILLETPLTYYHQTKEPLQKKENNRPALFL EAIENEKKQIVSLAYDESATGLKWPILNGQYLIRFQPQQISLPYRLRLRQARQINYPHTQQTYSYEGDVLITNNNQEEKA LTLSMNKVYETWDGFRFYLAGMTTASPQTANHVQIIVNQDPAKYLLTYPGGLIVTIGTVLLFWLKPYRKRD
Sequences:
>Translated_791_residues MNNWTRRCFHFLGGVYLAIFLISALALIVIAGTILETYTNSHLFAAEWTYHSPFFLSLLGLMFVNILISALRRWPFQKKH IPFLITHLGLLMVIGGTIIKQQMGIQGNLSLTEGSGSQTLLIPHTFALKVEQLNPPFETSRQEIRKVALEEGPHLHQFEQ FPTLKLKILGHAPHVNEQWETWIKGEKAYFSGIPPFPIQSWQTDIPFPKGILLPLSTSTSAWLALALRTDHLKESLKNFY LENLTVRLTSKTQPDIELEIPLQLALEKGILFEQRKIHFDLNLNFSSIQGLAPPTLNLSWKTPSDIEQSIQIALQGNHSL YMQYKNSWTLSAPFNVDLIRPTPALLIVEDRQKNTYLFAFDKYGRVHEESFKQNQFYNLIAYAQGHGGYVVQAEIPFPSF PASRLDKEKADEYFLQNQLQQVFSSTNTLIPPLKLFQQACQRSGHNFVNAFVEFLHVWNDSHTPLFSSLSLASPTLQESL SHLNWELIPKEDYHGCQWTCLFFEDLQKTLQADQDLLVILHEKSWPGLKTLVTKESKKEILLTHLTQQIFSASSYLPPPL IEEKSVLYQAQLLSAYFKAYDIDYHTLIQRGEVGEENYERLHAMHPTAKEKILLETPLTYYHQTKEPLQKKENNRPALFL EAIENEKKQIVSLAYDESATGLKWPILNGQYLIRFQPQQISLPYRLRLRQARQINYPHTQQTYSYEGDVLITNNNQEEKA LTLSMNKVYETWDGFRFYLAGMTTASPQTANHVQIIVNQDPAKYLLTYPGGLIVTIGTVLLFWLKPYRKRD >Mature_791_residues MNNWTRRCFHFLGGVYLAIFLISALALIVIAGTILETYTNSHLFAAEWTYHSPFFLSLLGLMFVNILISALRRWPFQKKH IPFLITHLGLLMVIGGTIIKQQMGIQGNLSLTEGSGSQTLLIPHTFALKVEQLNPPFETSRQEIRKVALEEGPHLHQFEQ FPTLKLKILGHAPHVNEQWETWIKGEKAYFSGIPPFPIQSWQTDIPFPKGILLPLSTSTSAWLALALRTDHLKESLKNFY LENLTVRLTSKTQPDIELEIPLQLALEKGILFEQRKIHFDLNLNFSSIQGLAPPTLNLSWKTPSDIEQSIQIALQGNHSL YMQYKNSWTLSAPFNVDLIRPTPALLIVEDRQKNTYLFAFDKYGRVHEESFKQNQFYNLIAYAQGHGGYVVQAEIPFPSF PASRLDKEKADEYFLQNQLQQVFSSTNTLIPPLKLFQQACQRSGHNFVNAFVEFLHVWNDSHTPLFSSLSLASPTLQESL SHLNWELIPKEDYHGCQWTCLFFEDLQKTLQADQDLLVILHEKSWPGLKTLVTKESKKEILLTHLTQQIFSASSYLPPPL IEEKSVLYQAQLLSAYFKAYDIDYHTLIQRGEVGEENYERLHAMHPTAKEKILLETPLTYYHQTKEPLQKKENNRPALFL EAIENEKKQIVSLAYDESATGLKWPILNGQYLIRFQPQQISLPYRLRLRQARQINYPHTQQTYSYEGDVLITNNNQEEKA LTLSMNKVYETWDGFRFYLAGMTTASPQTANHVQIIVNQDPAKYLLTYPGGLIVTIGTVLLFWLKPYRKRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91090; Mature: 91090
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNWTRRCFHFLGGVYLAIFLISALALIVIAGTILETYTNSHLFAAEWTYHSPFFLSLLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH LMFVNILISALRRWPFQKKHIPFLITHLGLLMVIGGTIIKQQMGIQGNLSLTEGSGSQTL HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE LIPHTFALKVEQLNPPFETSRQEIRKVALEEGPHLHQFEQFPTLKLKILGHAPHVNEQWE EEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCHHHH TWIKGEKAYFSGIPPFPIQSWQTDIPFPKGILLPLSTSTSAWLALALRTDHLKESLKNFY HHHCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHH LENLTVRLTSKTQPDIELEIPLQLALEKGILFEQRKIHFDLNLNFSSIQGLAPPTLNLSW HCCEEEEEECCCCCCEEEECCHHHHHHCCCEEEEEEEEEEEECCHHHHCCCCCCCEEEEC KTPSDIEQSIQIALQGNHSLYMQYKNSWTLSAPFNVDLIRPTPALLIVEDRQKNTYLFAF CCCHHHHHEEEEEEECCCEEEEEEECCEEEECCCEEEEECCCCEEEEEEECCCCEEEEEE DKYGRVHEESFKQNQFYNLIAYAQGHGGYVVQAEIPFPSFPASRLDKEKADEYFLQNQLQ CCCCCHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHH QVFSSTNTLIPPLKLFQQACQRSGHNFVNAFVEFLHVWNDSHTPLFSSLSLASPTLQESL HHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHH SHLNWELIPKEDYHGCQWTCLFFEDLQKTLQADQDLLVILHEKSWPGLKTLVTKESKKEI HHCCEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCHHHH LLTHLTQQIFSASSYLPPPLIEEKSVLYQAQLLSAYFKAYDIDYHTLIQRGEVGEENYER HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH LHAMHPTAKEKILLETPLTYYHQTKEPLQKKENNRPALFLEAIENEKKQIVSLAYDESAT HHHCCCCCCCCEEEECCHHHHHCCHHHHHHHCCCCCEEEEEHHHCCHHHEEEEEECCCCC GLKWPILNGQYLIRFQPQQISLPYRLRLRQARQINYPHTQQTYSYEGDVLITNNNQEEKA CEEEEEECCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHE LTLSMNKVYETWDGFRFYLAGMTTASPQTANHVQIIVNQDPAKYLLTYPGGLIVTIGTVL EEEEHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHH LFWLKPYRKRD HHHHCHHHCCC >Mature Secondary Structure MNNWTRRCFHFLGGVYLAIFLISALALIVIAGTILETYTNSHLFAAEWTYHSPFFLSLLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH LMFVNILISALRRWPFQKKHIPFLITHLGLLMVIGGTIIKQQMGIQGNLSLTEGSGSQTL HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE LIPHTFALKVEQLNPPFETSRQEIRKVALEEGPHLHQFEQFPTLKLKILGHAPHVNEQWE EEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCHHHH TWIKGEKAYFSGIPPFPIQSWQTDIPFPKGILLPLSTSTSAWLALALRTDHLKESLKNFY HHHCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHH LENLTVRLTSKTQPDIELEIPLQLALEKGILFEQRKIHFDLNLNFSSIQGLAPPTLNLSW HCCEEEEEECCCCCCEEEECCHHHHHHCCCEEEEEEEEEEEECCHHHHCCCCCCCEEEEC KTPSDIEQSIQIALQGNHSLYMQYKNSWTLSAPFNVDLIRPTPALLIVEDRQKNTYLFAF CCCHHHHHEEEEEEECCCEEEEEEECCEEEECCCEEEEECCCCEEEEEEECCCCEEEEEE DKYGRVHEESFKQNQFYNLIAYAQGHGGYVVQAEIPFPSFPASRLDKEKADEYFLQNQLQ CCCCCHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHH QVFSSTNTLIPPLKLFQQACQRSGHNFVNAFVEFLHVWNDSHTPLFSSLSLASPTLQESL HHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHH SHLNWELIPKEDYHGCQWTCLFFEDLQKTLQADQDLLVILHEKSWPGLKTLVTKESKKEI HHCCEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCHHHH LLTHLTQQIFSASSYLPPPLIEEKSVLYQAQLLSAYFKAYDIDYHTLIQRGEVGEENYER HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH LHAMHPTAKEKILLETPLTYYHQTKEPLQKKENNRPALFLEAIENEKKQIVSLAYDESAT HHHCCCCCCCCEEEECCHHHHHCCHHHHHHHCCCCCEEEEEHHHCCHHHEEEEEECCCCC GLKWPILNGQYLIRFQPQQISLPYRLRLRQARQINYPHTQQTYSYEGDVLITNNNQEEKA CEEEEEECCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHE LTLSMNKVYETWDGFRFYLAGMTTASPQTANHVQIIVNQDPAKYLLTYPGGLIVTIGTVL EEEEHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHH LFWLKPYRKRD HHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA