Click here to switch to the map view.

The map label for this gene is erpA [H]

Identifier: 46446719

GI number: 46446719

Start: 1298729

End: 1299433

Strand: Direct

Name: erpA [H]

Synonym: pc1085

Alternate gene names: 46446719

Gene position: 1298729-1299433 (Clockwise)

Preceding gene: 46446718

Following gene: 46446720

Centisome position: 53.79

GC content: 42.41

Gene sequence:

>705_bases
ATGTCTTGTTGTTCAAAACCCCACCAAGATGATCATCATTCTCACTCTCATTCCCATTCGCACTCTGGAGGCTGTTGTTC
GCCTGCTCCTTCCCCGCAAGAGCATCAACATTCTGGAGGATGCTGTTCTCAACAACCGAAAAAAGCAGCGACTGAAATTT
CTCGCTCTATGACCATTGAAGATATTTTAGGCATGTTTCCTTACAAAGCTCAAAAACTTTCACAAGAAATTACGAATGCT
GGGCTTCATTGTGTGGGTTGTCACGCGGCCGTATGGGAAACGTTAGAAGCTGGAATGATGACCCATGGTAAAACAGATGC
ACAAATTGATGAGCTCGTTCGACGCTTAAATGCTTTATTACAAGAACCTGTCGATCAATCCTCTATTTGCATCACACCAC
GGGGAGCTTCTAAATTTTTAGAAATTTTAGCGGATGAAAATAAGCAAGGCTGGGGCATGCGCTTTGCTGAAGAAATGGCT
GGCTGCAATGGCTTTGAATATGTGCTCGACTTTTCTGAAAAAGCAGACGCTGAAGATGAAATTTTTTCTTCCAACGGAAT
TGAAATTCATGTGAAAAAAGCAATGGTTCCCCGACTTTTAGGGTCAGAAATTGATTTTGTTGACGGTCTTCGCGGATCAG
GCTTTAAAATTTCTAATCCTAATGTTCGCTCTTCTTGCGGATGCGGAAGTTCTCACAACTATTAA

Upstream 100 bases:

>100_bases
AAAAAACTCAGGTTAAAATTATTTAAGTGCCGATTCAGATTTTGCCTGTCTTAATTTAGAATCTGAAGACACTTTAACTG
TTATCAAAGAGGTTAATACT

Downstream 100 bases:

>100_bases
AATTCTTAAGGCCACTCTGTTCTGAGTGGTCTTTCAAATGTATTCAAAAAAATTAGTTTTTCTATATCAAAATGTATAAA
ACTAGATATTAAATATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSCCSKPHQDDHHSHSHSHSHSGGCCSPAPSPQEHQHSGGCCSQQPKKAATEISRSMTIEDILGMFPYKAQKLSQEITNA
GLHCVGCHAAVWETLEAGMMTHGKTDAQIDELVRRLNALLQEPVDQSSICITPRGASKFLEILADENKQGWGMRFAEEMA
GCNGFEYVLDFSEKADAEDEIFSSNGIEIHVKKAMVPRLLGSEIDFVDGLRGSGFKISNPNVRSSCGCGSSHNY

Sequences:

>Translated_234_residues
MSCCSKPHQDDHHSHSHSHSHSGGCCSPAPSPQEHQHSGGCCSQQPKKAATEISRSMTIEDILGMFPYKAQKLSQEITNA
GLHCVGCHAAVWETLEAGMMTHGKTDAQIDELVRRLNALLQEPVDQSSICITPRGASKFLEILADENKQGWGMRFAEEMA
GCNGFEYVLDFSEKADAEDEIFSSNGIEIHVKKAMVPRLLGSEIDFVDGLRGSGFKISNPNVRSSCGCGSSHNY
>Mature_233_residues
SCCSKPHQDDHHSHSHSHSHSGGCCSPAPSPQEHQHSGGCCSQQPKKAATEISRSMTIEDILGMFPYKAQKLSQEITNAG
LHCVGCHAAVWETLEAGMMTHGKTDAQIDELVRRLNALLQEPVDQSSICITPRGASKFLEILADENKQGWGMRFAEEMAG
CNGFEYVLDFSEKADAEDEIFSSNGIEIHVKKAMVPRLLGSEIDFVDGLRGSGFKISNPNVRSSCGCGSSHNY

Specific function: Required for insertion of 4Fe-4S clusters (Potential) [H]

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=109, Percent_Identity=31.1926605504587, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=36.1904761904762, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786351, Length=102, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787974, Length=103, Percent_Identity=33.9805825242718, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=108, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI193209025, Length=108, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=31.4814814814815, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870
- InterPro:   IPR023063 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 25464; Mature: 25333

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCCSKPHQDDHHSHSHSHSHSGGCCSPAPSPQEHQHSGGCCSQQPKKAATEISRSMTIE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH
DILGMFPYKAQKLSQEITNAGLHCVGCHAAVWETLEAGMMTHGKTDAQIDELVRRLNALL
HHHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QEPVDQSSICITPRGASKFLEILADENKQGWGMRFAEEMAGCNGFEYVLDFSEKADAEDE
HCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHEECCHHCCCHHH
IFSSNGIEIHVKKAMVPRLLGSEIDFVDGLRGSGFKISNPNVRSSCGCGSSHNY
HHCCCCCEEEEHHHHHHHHHCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SCCSKPHQDDHHSHSHSHSHSGGCCSPAPSPQEHQHSGGCCSQQPKKAATEISRSMTIE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH
DILGMFPYKAQKLSQEITNAGLHCVGCHAAVWETLEAGMMTHGKTDAQIDELVRRLNALL
HHHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QEPVDQSSICITPRGASKFLEILADENKQGWGMRFAEEMAGCNGFEYVLDFSEKADAEDE
HCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHEECCHHCCCHHH
IFSSNGIEIHVKKAMVPRLLGSEIDFVDGLRGSGFKISNPNVRSSCGCGSSHNY
HHCCCCCEEEEHHHHHHHHHCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA