| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is lgt
Identifier: 46446717
GI number: 46446717
Start: 1297070
End: 1298194
Strand: Direct
Name: lgt
Synonym: pc1083
Alternate gene names: 46446717
Gene position: 1297070-1298194 (Clockwise)
Preceding gene: 46446716
Following gene: 46446718
Centisome position: 53.72
GC content: 34.67
Gene sequence:
>1125_bases ATGTTAACTGAACACTGGCTTGCTTGGCTTTATTGGAATCCTCCTCGAGAAGCATTTACTCTACCTTTTATTGATCATCC TGTCATGTGGTATGGCATCTGTTTTATTACTGGTTTTATCTTAGGCTATTTTATTATTGTCCCCATTATTGCTCTGTTTG TCAATCAATCAAAACATCTAAGCTCCATGGATATTCAAGATTGGAGATCCTTAGTTAATCAGTTAAAAACTTCTTCCTCT CCCTTAATTCAAAAATGTCAAAATGCATTAAATAGACAAGAGAGACAAAAATTAAACTCTGAAATTCAGCCATTAAACAT CTCTTCCGATCTCAAAAATGCTTTGTTAATCAAATTAAATACCATTTTAAAAGAAAACTCAATTCAACGAAAAGATTTAG AACAAGCCTTTCAAGGAGCCATAACTTCTGCCAAACAAATAAGTTATTTTCTAGCAGATCGTCTTTGCTGGTTCATTGTT TTCGGAACATTGATTGGAGCTCGTTTAGGCGCTGTTTTTTTTTATGATTGGAACTATTTTAAAAGTCATCCTTTAGAAAT CTTTGAAGTTTGGAAAGGGGGATTAGCAAGCCATGGTGGAGCCTTGGGAGTGATGTTAGCCCTCTTTTTTTATACTAGTT ATATAAAAAAATGGACGCCAACTTTATCATTCCTTAGGGTGTTAGATTTTGTCGCTATTCCAAGTGCATTAACAGCTGTA TTTATTCGAATAGGAAATTTCTTTAATCAAGAAATTATAGGAACTCCTTCTGCCTATCCTTGGGCTGTGTTATTTGCTCA ACCAGCTGATGGCAGCTTACCCATCCCTAGACATCCTGTACAATTATATGAAGCTTTTGCTTACTTAATGACTTTTTTCT TATTATTTACTCTTTGGAAAAAATGCAACACTTGTCTCGCGGCAGGCACCTATGCCGGTTTTCTATTTATCTTTAACTTT TCTAGTCGTTTCCTTTTAGAATTTTGGAAAGCCAACTTAGATTCCATTTTAACAAACCCTATCTTGCAAATGGGACAATT GCTTAGCATCCCTTTCATATTATTTGGGATTTGTCTTGTTTGGAGAAAACAAAACTGGCAAAATTTATTTTGCTGTCACA GATAG
Upstream 100 bases:
>100_bases GCAGTAGGTCGGGGGTTCGAATCCCTCTACTCCGATCCCACCCTATCTTTGGAAACAAAGATAGGGCTTTTTTTTTGACT CTTTTATTTCAAGGATGTTC
Downstream 100 bases:
>100_bases TTAGGTGTAAATTTAAACTGAGCATGATTCATAAACCCCTTGATTTTATAACTAAATTAACCGATAATTTTTATATTAAA TAACTAATTACGAATTTATT
Product: putative prolipoprotein diacylglycerol transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MLTEHWLAWLYWNPPREAFTLPFIDHPVMWYGICFITGFILGYFIIVPIIALFVNQSKHLSSMDIQDWRSLVNQLKTSSS PLIQKCQNALNRQERQKLNSEIQPLNISSDLKNALLIKLNTILKENSIQRKDLEQAFQGAITSAKQISYFLADRLCWFIV FGTLIGARLGAVFFYDWNYFKSHPLEIFEVWKGGLASHGGALGVMLALFFYTSYIKKWTPTLSFLRVLDFVAIPSALTAV FIRIGNFFNQEIIGTPSAYPWAVLFAQPADGSLPIPRHPVQLYEAFAYLMTFFLLFTLWKKCNTCLAAGTYAGFLFIFNF SSRFLLEFWKANLDSILTNPILQMGQLLSIPFILFGICLVWRKQNWQNLFCCHR
Sequences:
>Translated_374_residues MLTEHWLAWLYWNPPREAFTLPFIDHPVMWYGICFITGFILGYFIIVPIIALFVNQSKHLSSMDIQDWRSLVNQLKTSSS PLIQKCQNALNRQERQKLNSEIQPLNISSDLKNALLIKLNTILKENSIQRKDLEQAFQGAITSAKQISYFLADRLCWFIV FGTLIGARLGAVFFYDWNYFKSHPLEIFEVWKGGLASHGGALGVMLALFFYTSYIKKWTPTLSFLRVLDFVAIPSALTAV FIRIGNFFNQEIIGTPSAYPWAVLFAQPADGSLPIPRHPVQLYEAFAYLMTFFLLFTLWKKCNTCLAAGTYAGFLFIFNF SSRFLLEFWKANLDSILTNPILQMGQLLSIPFILFGICLVWRKQNWQNLFCCHR >Mature_374_residues MLTEHWLAWLYWNPPREAFTLPFIDHPVMWYGICFITGFILGYFIIVPIIALFVNQSKHLSSMDIQDWRSLVNQLKTSSS PLIQKCQNALNRQERQKLNSEIQPLNISSDLKNALLIKLNTILKENSIQRKDLEQAFQGAITSAKQISYFLADRLCWFIV FGTLIGARLGAVFFYDWNYFKSHPLEIFEVWKGGLASHGGALGVMLALFFYTSYIKKWTPTLSFLRVLDFVAIPSALTAV FIRIGNFFNQEIIGTPSAYPWAVLFAQPADGSLPIPRHPVQLYEAFAYLMTFFLLFTLWKKCNTCLAAGTYAGFLFIFNF SSRFLLEFWKANLDSILTNPILQMGQLLSIPFILFGICLVWRKQNWQNLFCCHR
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=234, Percent_Identity=32.4786324786325, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_PARUW (Q6MC92)
Other databases:
- EMBL: BX908798 - RefSeq: YP_008082.1 - STRING: Q6MC92 - GeneID: 2780834 - GenomeReviews: BX908798_GR - KEGG: pcu:pc1083 - NMPDR: fig|264201.1.peg.1083 - eggNOG: COG0682 - PhylomeDB: Q6MC92 - ProtClustDB: CLSK2762313 - BioCyc: CPRO264201:PC1083-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 43143; Mature: 43143
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xbf3cff4)-; HASH(0xd40fb5c)-; HASH(0xdd77d10)-; HASH(0xd9743e8)-; HASH(0xd22bcb4)-; HASH(0xc8f30dc)-; HASH(0xc8e0984)-;
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTEHWLAWLYWNPPREAFTLPFIDHPVMWYGICFITGFILGYFIIVPIIALFVNQSKHL CCCCCEEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SSMDIQDWRSLVNQLKTSSSPLIQKCQNALNRQERQKLNSEIQPLNISSDLKNALLIKLN CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH TILKENSIQRKDLEQAFQGAITSAKQISYFLADRLCWFIVFGTLIGARLGAVFFYDWNYF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHH KSHPLEIFEVWKGGLASHGGALGVMLALFFYTSYIKKWTPTLSFLRVLDFVAIPSALTAV HCCCHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH FIRIGNFFNQEIIGTPSAYPWAVLFAQPADGSLPIPRHPVQLYEAFAYLMTFFLLFTLWK HHHHHHHHCHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KCNTCLAAGTYAGFLFIFNFSSRFLLEFWKANLDSILTNPILQMGQLLSIPFILFGICLV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRKQNWQNLFCCHR HHHCCCCCCCCCCH >Mature Secondary Structure MLTEHWLAWLYWNPPREAFTLPFIDHPVMWYGICFITGFILGYFIIVPIIALFVNQSKHL CCCCCEEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SSMDIQDWRSLVNQLKTSSSPLIQKCQNALNRQERQKLNSEIQPLNISSDLKNALLIKLN CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH TILKENSIQRKDLEQAFQGAITSAKQISYFLADRLCWFIVFGTLIGARLGAVFFYDWNYF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHH KSHPLEIFEVWKGGLASHGGALGVMLALFFYTSYIKKWTPTLSFLRVLDFVAIPSALTAV HCCCHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH FIRIGNFFNQEIIGTPSAYPWAVLFAQPADGSLPIPRHPVQLYEAFAYLMTFFLLFTLWK HHHHHHHHCHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KCNTCLAAGTYAGFLFIFNFSSRFLLEFWKANLDSILTNPILQMGQLLSIPFILFGICLV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRKQNWQNLFCCHR HHHCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA