Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46446650

Identifier: 46446650

GI number: 46446650

Start: 1208815

End: 1209030

Strand: Direct

Name: 46446650

Synonym: pc1016

Alternate gene names: NA

Gene position: 1208815-1209030 (Clockwise)

Preceding gene: 46446649

Following gene: 46446651

Centisome position: 50.07

GC content: 29.63

Gene sequence:

>216_bases
ATGTTAAAAAAATTGTCCTGTACACAGTTCATTGGCACAGAAAGACGATTAAGTCTTTGGGATGTAGGTACTCCTGTAGA
AGAAAATATTTTGTTTTGGAAAGAAATGCATGATTTAAAAGAAACGCAGAATAATCTCCGCCGCGGATTTTTTCAAAGAT
ATGACATTATAAATAAAGAAATACAATTTCTCAAAAAACAGCATAAAAAAAATTAA

Upstream 100 bases:

>100_bases
AAGAAAATGTTTATTGTGTTTAGAATTATATATGAATGAATTTTTACATTATATAAGACTTCTTCGAAAGAAAAATTTTA
TTCTAAATAGGTTGTAAGGT

Downstream 100 bases:

>100_bases
TAGGATGGTTTTTTCCTCTGATACAAAAATACGGATTATTTCAATTATATCCGAAAAATTGTAACAATTGGAAACTAATT
AAAAATCCTCAAGAAGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MLKKLSCTQFIGTERRLSLWDVGTPVEENILFWKEMHDLKETQNNLRRGFFQRYDIINKEIQFLKKQHKKN

Sequences:

>Translated_71_residues
MLKKLSCTQFIGTERRLSLWDVGTPVEENILFWKEMHDLKETQNNLRRGFFQRYDIINKEIQFLKKQHKKN
>Mature_71_residues
MLKKLSCTQFIGTERRLSLWDVGTPVEENILFWKEMHDLKETQNNLRRGFFQRYDIINKEIQFLKKQHKKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8711; Mature: 8711

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLSCTQFIGTERRLSLWDVGTPVEENILFWKEMHDLKETQNNLRRGFFQRYDIINKE
CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQFLKKQHKKN
HHHHHHHHCCC
>Mature Secondary Structure
MLKKLSCTQFIGTERRLSLWDVGTPVEENILFWKEMHDLKETQNNLRRGFFQRYDIINKE
CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQFLKKQHKKN
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA