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The map label for this gene is ykpA [H]

Identifier: 46446645

GI number: 46446645

Start: 1205240

End: 1207180

Strand: Reverse

Name: ykpA [H]

Synonym: pc1011

Alternate gene names: 46446645

Gene position: 1207180-1205240 (Counterclockwise)

Preceding gene: 46446646

Following gene: 46446644

Centisome position: 50.0

GC content: 36.01

Gene sequence:

>1941_bases
ATGATTGCATTAATCGAATTAACAATGCGTTTTGGCGCTAAAATTCTTTTTAAACAAGTGAATCTTCAATTTAATCCAGG
AAATCGATACGGATTGATTGGGGCTAATGGGTGTGGAAAATCTACTCTAATCAAAATTTTGACGGGGGAGGTTTGTGCTG
ATGCAGGTCACGTGGCCATCCCTCAACAGCTTACTCTTGGTTCTTTAAAACAAGATCATTATGTGTATGAAAATGAACGG
GTAATGGATGTTGTGTTAAGAGGAAAACAGTTATTATGGCGCAGCTTAGAAGAAAAAAAACGCATTTTACAGCGAGAACC
ATTTACAGACGATGATTGCCAAGCCCTTTCTCGTTTAGAAAAAATAATTGAGGATCAAGATGGATACACTGCTGAAGGAG
AGGCGGCAAAATTACTAGAGGGATTGGGAATTCGAGAAGGGTCTCATCAAAAGCCCTTACATTTTTTATCGGGGGGCTAT
AAGCTCCGGGTTCTTCTCGCTCAGCTATTTTTTGGTAAACATGCCATTTTAGTGTTAGATGAACCGACTAACCACTTAGA
TCTATATTCCATTAAATGGCTAGAAGGTTATTTACGCAATTTTCCTGGTACATTAATTGTGACATCTCATGATCGAGATT
TTCTTAATAATATTTGTACGCATATTGCAGATGTCGATTATGGGACGATCAAAATTTATAAAGGAGATTATGAAACTTTT
GCTAAACAGAAAAAGCAAGATCTTGAGCAAAAAGAAGCAATGCTCACTAAGCATGATAAGCGTCGAGAAGATCTACAAGG
GTTTATTGATCGCTTTGGAGCTAAAGCGACAAAGGCTCGACAAGCGCAATCCAAAGCTCGTTTGGTTGAAAAAATAGAAG
ATGAAATGGATAGTTTAAATCTTCTTCCGACTTCTCGACTTTATCCAAATTTGAATTTTGTACCCGAAAGAGCTTCTGGT
GTTACTGTTCTTAAAGCTAAAAATCTCTATAAAACTTATGGATCCAAAAAAGTTTTGGAGAATGTTTCATTTGAAATAGA
ACGAGGAGATCGTTTGGCGATTATTGGTCCCAATGGAATTGGGAAATCGACTTTACTGGAAATATTGACAGATCATGCCC
AACCCGACCAAGGAGAATTTGATTGGGGATTTGCGACTCAAATTGCTTATTTTCCTCAAGACCATGCAAGAGAAGTGCAA
GGTGACTTGAACTTACTTGATTGGCTGAGTCAATTTGATCGGACCAAAACTCAAGAGCAGGTCAGAGACCTTTTAGGTCT
CGTTAAATTCTCAGGGGATACAGTTAAGCAGCCTATTCATACATTAAGTGGAGGCGAAACAGCCCGTTTAATTCTTGCTA
AAATGATGCTGTTAAAACCTAATGTTTTGATTTTTGATGAGCCGACAAATCACTTGGATTTAGAAGCTATTGATGAATTA
ACGAAAGCTTTGCAAAATTATTCAGGAACTCTTTTGCTTGTTAGCCATAACCGTTATTTTGTTTCACATATTGCTAATCG
CATTTTGGAAATTAACTATCAAAAAATAGAAGATTTTAAAGGAAGCTATCCTGAATACGTAAAAAAACAAGAAAAAGATC
ATTTATCCAAGCCAAAGGCTTTGAGTCAACGTTACGCACATGAAGAAGCAAAAACAAATTCTTTGTCAACTTATCAAGAT
CAAAAACGTCTAAAAAGTTTGAAAACTCAATTAAAGAAGCGAATATTTTTAGCAGAGGAAGAGTGTCATAAAATTGAAGA
AAAGATTAAAGAAATCGAACAAATTATGACTTCTGAAGGATTTTATCAAATATCAACACGAGAAAAACAGCTAGAATATA
CTCAAGAAAAACAATTACTGGAAAATGCATTAATGACTTCTATGGAAAAATGGGAAACAGCAAGTTTGGAATTGCAACAA
AGTGAAGCTGAAGATGAGTGA

Upstream 100 bases:

>100_bases
ATAAGAAGATCAACTGATAATAGTTATGCTTTTTACCCTTTTCATGATAAAATCCCTCATTTCTCAATAAAATAATAAAC
GTGTAAACTGATCAGAATTT

Downstream 100 bases:

>100_bases
TAAATCTTTGAATATTGTAGTTGTGGGAGGAGGAGCTGCTGGTTTTTTTGGAGCCATTTCTTGCGCCCATCATTTTCCTC
AACATCAAGTCATTCTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MIALIELTMRFGAKILFKQVNLQFNPGNRYGLIGANGCGKSTLIKILTGEVCADAGHVAIPQQLTLGSLKQDHYVYENER
VMDVVLRGKQLLWRSLEEKKRILQREPFTDDDCQALSRLEKIIEDQDGYTAEGEAAKLLEGLGIREGSHQKPLHFLSGGY
KLRVLLAQLFFGKHAILVLDEPTNHLDLYSIKWLEGYLRNFPGTLIVTSHDRDFLNNICTHIADVDYGTIKIYKGDYETF
AKQKKQDLEQKEAMLTKHDKRREDLQGFIDRFGAKATKARQAQSKARLVEKIEDEMDSLNLLPTSRLYPNLNFVPERASG
VTVLKAKNLYKTYGSKKVLENVSFEIERGDRLAIIGPNGIGKSTLLEILTDHAQPDQGEFDWGFATQIAYFPQDHAREVQ
GDLNLLDWLSQFDRTKTQEQVRDLLGLVKFSGDTVKQPIHTLSGGETARLILAKMMLLKPNVLIFDEPTNHLDLEAIDEL
TKALQNYSGTLLLVSHNRYFVSHIANRILEINYQKIEDFKGSYPEYVKKQEKDHLSKPKALSQRYAHEEAKTNSLSTYQD
QKRLKSLKTQLKKRIFLAEEECHKIEEKIKEIEQIMTSEGFYQISTREKQLEYTQEKQLLENALMTSMEKWETASLELQQ
SEAEDE

Sequences:

>Translated_646_residues
MIALIELTMRFGAKILFKQVNLQFNPGNRYGLIGANGCGKSTLIKILTGEVCADAGHVAIPQQLTLGSLKQDHYVYENER
VMDVVLRGKQLLWRSLEEKKRILQREPFTDDDCQALSRLEKIIEDQDGYTAEGEAAKLLEGLGIREGSHQKPLHFLSGGY
KLRVLLAQLFFGKHAILVLDEPTNHLDLYSIKWLEGYLRNFPGTLIVTSHDRDFLNNICTHIADVDYGTIKIYKGDYETF
AKQKKQDLEQKEAMLTKHDKRREDLQGFIDRFGAKATKARQAQSKARLVEKIEDEMDSLNLLPTSRLYPNLNFVPERASG
VTVLKAKNLYKTYGSKKVLENVSFEIERGDRLAIIGPNGIGKSTLLEILTDHAQPDQGEFDWGFATQIAYFPQDHAREVQ
GDLNLLDWLSQFDRTKTQEQVRDLLGLVKFSGDTVKQPIHTLSGGETARLILAKMMLLKPNVLIFDEPTNHLDLEAIDEL
TKALQNYSGTLLLVSHNRYFVSHIANRILEINYQKIEDFKGSYPEYVKKQEKDHLSKPKALSQRYAHEEAKTNSLSTYQD
QKRLKSLKTQLKKRIFLAEEECHKIEEKIKEIEQIMTSEGFYQISTREKQLEYTQEKQLLENALMTSMEKWETASLELQQ
SEAEDE
>Mature_646_residues
MIALIELTMRFGAKILFKQVNLQFNPGNRYGLIGANGCGKSTLIKILTGEVCADAGHVAIPQQLTLGSLKQDHYVYENER
VMDVVLRGKQLLWRSLEEKKRILQREPFTDDDCQALSRLEKIIEDQDGYTAEGEAAKLLEGLGIREGSHQKPLHFLSGGY
KLRVLLAQLFFGKHAILVLDEPTNHLDLYSIKWLEGYLRNFPGTLIVTSHDRDFLNNICTHIADVDYGTIKIYKGDYETF
AKQKKQDLEQKEAMLTKHDKRREDLQGFIDRFGAKATKARQAQSKARLVEKIEDEMDSLNLLPTSRLYPNLNFVPERASG
VTVLKAKNLYKTYGSKKVLENVSFEIERGDRLAIIGPNGIGKSTLLEILTDHAQPDQGEFDWGFATQIAYFPQDHAREVQ
GDLNLLDWLSQFDRTKTQEQVRDLLGLVKFSGDTVKQPIHTLSGGETARLILAKMMLLKPNVLIFDEPTNHLDLEAIDEL
TKALQNYSGTLLLVSHNRYFVSHIANRILEINYQKIEDFKGSYPEYVKKQEKDHLSKPKALSQRYAHEEAKTNSLSTYQD
QKRLKSLKTQLKKRIFLAEEECHKIEEKIKEIEQIMTSEGFYQISTREKQLEYTQEKQLLENALMTSMEKWETASLELQQ
SEAEDE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=522, Percent_Identity=30.4597701149425, Blast_Score=265, Evalue=1e-70,
Organism=Homo sapiens, GI10947137, Length=547, Percent_Identity=30.7129798903108, Blast_Score=251, Evalue=2e-66,
Organism=Homo sapiens, GI27881506, Length=547, Percent_Identity=30.7129798903108, Blast_Score=251, Evalue=2e-66,
Organism=Homo sapiens, GI69354671, Length=539, Percent_Identity=32.2820037105751, Blast_Score=230, Evalue=4e-60,
Organism=Homo sapiens, GI10947135, Length=539, Percent_Identity=32.2820037105751, Blast_Score=229, Evalue=6e-60,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=41.9962335216573, Blast_Score=444, Evalue=1e-126,
Organism=Escherichia coli, GI1789751, Length=653, Percent_Identity=32.0061255742726, Blast_Score=340, Evalue=1e-94,
Organism=Escherichia coli, GI2367384, Length=535, Percent_Identity=34.5794392523364, Blast_Score=258, Evalue=6e-70,
Organism=Escherichia coli, GI1787182, Length=542, Percent_Identity=30.9963099630996, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI1788165, Length=219, Percent_Identity=29.2237442922374, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI87081791, Length=221, Percent_Identity=28.5067873303167, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI87081709, Length=210, Percent_Identity=26.1904761904762, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1789962, Length=222, Percent_Identity=28.8288288288288, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1786975, Length=507, Percent_Identity=24.2603550295858, Blast_Score=76, Evalue=9e-15,
Organism=Escherichia coli, GI1787758, Length=192, Percent_Identity=26.5625, Blast_Score=76, Evalue=9e-15,
Organism=Escherichia coli, GI48995001, Length=209, Percent_Identity=28.2296650717703, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790739, Length=171, Percent_Identity=29.8245614035088, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=30.2884615384615, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787500, Length=200, Percent_Identity=23.5, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787547, Length=222, Percent_Identity=28.3783783783784, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786563, Length=189, Percent_Identity=27.5132275132275, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1788644, Length=228, Percent_Identity=27.6315789473684, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787112, Length=225, Percent_Identity=30.2222222222222, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786803, Length=220, Percent_Identity=29.0909090909091, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1786319, Length=221, Percent_Identity=26.6968325791855, Blast_Score=66, Evalue=9e-12,
Organism=Escherichia coli, GI1788450, Length=197, Percent_Identity=23.8578680203046, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789593, Length=198, Percent_Identity=26.7676767676768, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1789991, Length=245, Percent_Identity=25.3061224489796, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1788897, Length=214, Percent_Identity=28.5046728971963, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=540, Percent_Identity=32.7777777777778, Blast_Score=261, Evalue=9e-70,
Organism=Caenorhabditis elegans, GI17555318, Length=543, Percent_Identity=30.7550644567219, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17559834, Length=534, Percent_Identity=29.7752808988764, Blast_Score=246, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI193209708, Length=221, Percent_Identity=30.316742081448, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17511077, Length=225, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=555, Percent_Identity=30.990990990991, Blast_Score=249, Evalue=7e-67,
Organism=Saccharomyces cerevisiae, GI6321121, Length=552, Percent_Identity=30.7971014492754, Blast_Score=245, Evalue=1e-65,
Organism=Saccharomyces cerevisiae, GI6325030, Length=396, Percent_Identity=28.2828282828283, Blast_Score=133, Evalue=9e-32,
Organism=Saccharomyces cerevisiae, GI6323278, Length=407, Percent_Identity=27.5184275184275, Blast_Score=131, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=201, Percent_Identity=31.8407960199005, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6320296, Length=513, Percent_Identity=23.0019493177388, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24666836, Length=525, Percent_Identity=30.4761904761905, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24642252, Length=546, Percent_Identity=31.1355311355311, Blast_Score=259, Evalue=3e-69,
Organism=Drosophila melanogaster, GI18859989, Length=546, Percent_Identity=31.1355311355311, Blast_Score=259, Evalue=3e-69,
Organism=Drosophila melanogaster, GI24641342, Length=544, Percent_Identity=29.2279411764706, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24643394, Length=218, Percent_Identity=25.6880733944954, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 74047; Mature: 74047

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALIELTMRFGAKILFKQVNLQFNPGNRYGLIGANGCGKSTLIKILTGEVCADAGHVAI
CEEEEEEHHHHHHHHHHHHHCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
PQQLTLGSLKQDHYVYENERVMDVVLRGKQLLWRSLEEKKRILQREPFTDDDCQALSRLE
CCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KIIEDQDGYTAEGEAAKLLEGLGIREGSHQKPLHFLSGGYKLRVLLAQLFFGKHAILVLD
HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCEEEEEE
EPTNHLDLYSIKWLEGYLRNFPGTLIVTSHDRDFLNNICTHIADVDYGTIKIYKGDYETF
CCCCCCEEEEHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCHHHH
AKQKKQDLEQKEAMLTKHDKRREDLQGFIDRFGAKATKARQAQSKARLVEKIEDEMDSLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
LLPTSRLYPNLNFVPERASGVTVLKAKNLYKTYGSKKVLENVSFEIERGDRLAIIGPNGI
CCCCHHHCCCCCCCCCCCCCEEEEEHHHHHHHHCCHHHHHCCCEEEECCCEEEEECCCCC
GKSTLLEILTDHAQPDQGEFDWGFATQIAYFPQDHAREVQGDLNLLDWLSQFDRTKTQEQ
CHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCHHHHHHHCCHHHHHHHHHHHCCCHHHH
VRDLLGLVKFSGDTVKQPIHTLSGGETARLILAKMMLLKPNVLIFDEPTNHLDLEAIDEL
HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
TKALQNYSGTLLLVSHNRYFVSHIANRILEINYQKIEDFKGSYPEYVKKQEKDHLSKPKA
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCHH
LSQRYAHEEAKTNSLSTYQDQKRLKSLKTQLKKRIFLAEEECHKIEEKIKEIEQIMTSEG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FYQISTREKQLEYTQEKQLLENALMTSMEKWETASLELQQSEAEDE
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure
MIALIELTMRFGAKILFKQVNLQFNPGNRYGLIGANGCGKSTLIKILTGEVCADAGHVAI
CEEEEEEHHHHHHHHHHHHHCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
PQQLTLGSLKQDHYVYENERVMDVVLRGKQLLWRSLEEKKRILQREPFTDDDCQALSRLE
CCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KIIEDQDGYTAEGEAAKLLEGLGIREGSHQKPLHFLSGGYKLRVLLAQLFFGKHAILVLD
HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCEEEEEE
EPTNHLDLYSIKWLEGYLRNFPGTLIVTSHDRDFLNNICTHIADVDYGTIKIYKGDYETF
CCCCCCEEEEHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCHHHH
AKQKKQDLEQKEAMLTKHDKRREDLQGFIDRFGAKATKARQAQSKARLVEKIEDEMDSLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
LLPTSRLYPNLNFVPERASGVTVLKAKNLYKTYGSKKVLENVSFEIERGDRLAIIGPNGI
CCCCHHHCCCCCCCCCCCCCEEEEEHHHHHHHHCCHHHHHCCCEEEECCCEEEEECCCCC
GKSTLLEILTDHAQPDQGEFDWGFATQIAYFPQDHAREVQGDLNLLDWLSQFDRTKTQEQ
CHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCHHHHHHHCCHHHHHHHHHHHCCCHHHH
VRDLLGLVKFSGDTVKQPIHTLSGGETARLILAKMMLLKPNVLIFDEPTNHLDLEAIDEL
HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
TKALQNYSGTLLLVSHNRYFVSHIANRILEINYQKIEDFKGSYPEYVKKQEKDHLSKPKA
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCHH
LSQRYAHEEAKTNSLSTYQDQKRLKSLKTQLKKRIFLAEEECHKIEEKIKEIEQIMTSEG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FYQISTREKQLEYTQEKQLLENALMTSMEKWETASLELQQSEAEDE
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]