| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446637
Identifier: 46446637
GI number: 46446637
Start: 1194716
End: 1195081
Strand: Direct
Name: 46446637
Synonym: pc1003
Alternate gene names: NA
Gene position: 1194716-1195081 (Clockwise)
Preceding gene: 46446636
Following gene: 46446638
Centisome position: 49.48
GC content: 36.07
Gene sequence:
>366_bases ATGATCAGTGGTTATGGCTTGTTTCCCATAAAAAAAGTCGGCAAGTGCTTGCTATGCAAGTGGGTCCTCGAGATAAAAAA ACCGCTGAGCTTCTTTTTGCAAAAACTACCCGAATCATTAAAAAAAGCCTTCTATTTCACTGATAAATTTAATGTCTATT ATGAAACCAATCCTTGGAGTCAACATCAACCAGTTAGCAAGCAATCTGGTCAGACAAGCTATATTGAAAGATTTAATTGT ACTCGCAGACAAAGATGTGCAAGACTTGTAAGGAAAACACTTTCATTTTCTAAAAAACTAACTAATCACATTGGGTTGAC CTTGCCCCTTAAAAATCATCCAAGAAGAAATAGAGGTTCGTGTTAA
Upstream 100 bases:
>100_bases GATTTAAATGCACAAGTCACTTGTCGTGAGAAAGATGAGTTGGAAGTGGCTAAATTTGAAGTAGATGAGCTTTAATGGAG TTTTATAGGAAATAAGAAAA
Downstream 100 bases:
>100_bases AATAAATAAATTTTAGGAAACGAACCAATGAAAAAAAGATTTTCAGAAGAACACATCATTCAAATACTCAAAGAAGTAGA AGCAGGCTCAGCAGTAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MISGYGLFPIKKVGKCLLCKWVLEIKKPLSFFLQKLPESLKKAFYFTDKFNVYYETNPWSQHQPVSKQSGQTSYIERFNC TRRQRCARLVRKTLSFSKKLTNHIGLTLPLKNHPRRNRGSC
Sequences:
>Translated_121_residues MISGYGLFPIKKVGKCLLCKWVLEIKKPLSFFLQKLPESLKKAFYFTDKFNVYYETNPWSQHQPVSKQSGQTSYIERFNC TRRQRCARLVRKTLSFSKKLTNHIGLTLPLKNHPRRNRGSC >Mature_121_residues MISGYGLFPIKKVGKCLLCKWVLEIKKPLSFFLQKLPESLKKAFYFTDKFNVYYETNPWSQHQPVSKQSGQTSYIERFNC TRRQRCARLVRKTLSFSKKLTNHIGLTLPLKNHPRRNRGSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14244; Mature: 14244
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISGYGLFPIKKVGKCLLCKWVLEIKKPLSFFLQKLPESLKKAFYFTDKFNVYYETNPWS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC QHQPVSKQSGQTSYIERFNCTRRQRCARLVRKTLSFSKKLTNHIGLTLPLKNHPRRNRGS CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCC C C >Mature Secondary Structure MISGYGLFPIKKVGKCLLCKWVLEIKKPLSFFLQKLPESLKKAFYFTDKFNVYYETNPWS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC QHQPVSKQSGQTSYIERFNCTRRQRCARLVRKTLSFSKKLTNHIGLTLPLKNHPRRNRGS CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCC C C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA