| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446632
Identifier: 46446632
GI number: 46446632
Start: 1190729
End: 1190947
Strand: Direct
Name: 46446632
Synonym: pc0998
Alternate gene names: NA
Gene position: 1190729-1190947 (Clockwise)
Preceding gene: 46446627
Following gene: 46446636
Centisome position: 49.32
GC content: 34.25
Gene sequence:
>219_bases ATGGAAAAAGCAAAAGTAATGAGCTTCGTAGAATTCCGTCAAAACTTATCAGAATGTGTTAACTTAGCAAAATATAAAGG CGAGAGATTTTTGATTACTCGTAATGGAAAAGCCGTAGGTGCTTTTGCCCCTGTAGAGGATTTAGAAAAAATTAATGCAT TTAATAATGTAATTGCTGACACAGCCACTGATGAGATAAGCTCAGAATTTGAATCCTAA
Upstream 100 bases:
>100_bases TGACTTATTTATCAATACAATTATTTACTATATTTTATAGTCATAAACTTGTTATCTAATAAATTTATTAATTTAATCAA AAGATATATAGGTTAATGAT
Downstream 100 bases:
>100_bases ATCAACAAAAGGATTTAAGTTATCTCTAGAGAGCTTTTTTCTTACCGGAACTGCATGAATTAACTGTGATAATATGTATC TTTAAGAAAATTTATTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MEKAKVMSFVEFRQNLSECVNLAKYKGERFLITRNGKAVGAFAPVEDLEKINAFNNVIADTATDEISSEFES
Sequences:
>Translated_72_residues MEKAKVMSFVEFRQNLSECVNLAKYKGERFLITRNGKAVGAFAPVEDLEKINAFNNVIADTATDEISSEFES >Mature_72_residues MEKAKVMSFVEFRQNLSECVNLAKYKGERFLITRNGKAVGAFAPVEDLEKINAFNNVIADTATDEISSEFES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8063; Mature: 8063
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKAKVMSFVEFRQNLSECVNLAKYKGERFLITRNGKAVGAFAPVEDLEKINAFNNVIAD CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHC TATDEISSEFES CHHHHHHHHCCC >Mature Secondary Structure MEKAKVMSFVEFRQNLSECVNLAKYKGERFLITRNGKAVGAFAPVEDLEKINAFNNVIAD CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHC TATDEISSEFES CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA