Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46446629

Identifier: 46446629

GI number: 46446629

Start: 1189309

End: 1189611

Strand: Reverse

Name: 46446629

Synonym: pc0995

Alternate gene names: NA

Gene position: 1189611-1189309 (Counterclockwise)

Preceding gene: 46446630

Following gene: 46446628

Centisome position: 49.27

GC content: 41.58

Gene sequence:

>303_bases
ATGGCAAGTAATAAGAAGTATCAAGATTTTCTCTTAGAACAGCTAAAGGATCATGACGAGGCTGTTGCCTATCTAAATGC
TGCTTTAGAAGAAAGCCTGAAGGGCGACGAAGAGTCGCAACAAGTTTTTTTGATTGCTCTTCGCAATGTAGCGGAAGCAC
AAGGTGGGATTGGAGCTTTAGCCAAAAAAGCGCATGTCGGCCGTGAAAGCCTTTACAAAACACTTTCAGGCGCTGGAAAC
CCTAAATGGCATACCTTGGTTTCTTTGTGTATGGCTATGGGATTAAATTTAAGATTAACTTAA

Upstream 100 bases:

>100_bases
GTCATCTTGCTTCTTTGCGGTGGTGATAAAGGATCTCAGGACAAGGACATTGCAAAAGCAATGGAGTATTTGAAGGATTA
TCAATCTAGGGAGTTAAGTT

Downstream 100 bases:

>100_bases
TTATTGAAGGGAAAGTTATGGCTAAAAAATTTAGCTGATGTACTCAACAGTGATTATAGACAATTTTTATAGGGATCAGC
TTACTGGAATATAGGTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Addiction Module Antidote Protein

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MASNKKYQDFLLEQLKDHDEAVAYLNAALEESLKGDEESQQVFLIALRNVAEAQGGIGALAKKAHVGRESLYKTLSGAGN
PKWHTLVSLCMAMGLNLRLT

Sequences:

>Translated_100_residues
MASNKKYQDFLLEQLKDHDEAVAYLNAALEESLKGDEESQQVFLIALRNVAEAQGGIGALAKKAHVGRESLYKTLSGAGN
PKWHTLVSLCMAMGLNLRLT
>Mature_99_residues
ASNKKYQDFLLEQLKDHDEAVAYLNAALEESLKGDEESQQVFLIALRNVAEAQGGIGALAKKAHVGRESLYKTLSGAGNP
KWHTLVSLCMAMGLNLRLT

Specific function: Unknown

COG id: COG3636

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10931; Mature: 10799

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNKKYQDFLLEQLKDHDEAVAYLNAALEESLKGDEESQQVFLIALRNVAEAQGGIGAL
CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH
AKKAHVGRESLYKTLSGAGNPKWHTLVSLCMAMGLNLRLT
HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ASNKKYQDFLLEQLKDHDEAVAYLNAALEESLKGDEESQQVFLIALRNVAEAQGGIGAL
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH
AKKAHVGRESLYKTLSGAGNPKWHTLVSLCMAMGLNLRLT
HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA