| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446606
Identifier: 46446606
GI number: 46446606
Start: 1170480
End: 1170701
Strand: Reverse
Name: 46446606
Synonym: pc0972
Alternate gene names: NA
Gene position: 1170701-1170480 (Counterclockwise)
Preceding gene: 46446607
Following gene: 46446604
Centisome position: 48.49
GC content: 38.74
Gene sequence:
>222_bases TTGGACGAAAGTTTAAATGCTTGCAATATTCACTTGAACAGATCGTTAAATGGAAATACTCGCAGCCGTTTTAGCAACCA CAAAAACTTCACTTTCCCTTCTTATTCAGCTAACAAACGCCAGTTTAACGTAAGAAACCCTCAAAAATATTCTAGGAGCC TAGCAGCTTCGATTTCTGTCTTTGAAAAGAACAGTCGAGGCTTGGATGGGTTCAAGCAATAA
Upstream 100 bases:
>100_bases GCAAAGCCACTGAAGAACTCGCGAAACAATTAGTTGAAAAAACAAAGAAACTTCAACTTGCCAGTGTTGCTTAAAAAGTC TTTAAATCATTTGCAGGCTT
Downstream 100 bases:
>100_bases TTAGCAAAAGCAGCCATCAGATTGCTCAGAAAGTTTTATCGACTTCGGTGCCGATGATGTTTTATCTGACAGCTATTTTC AACAGATAATTCACACTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MDESLNACNIHLNRSLNGNTRSRFSNHKNFTFPSYSANKRQFNVRNPQKYSRSLAASISVFEKNSRGLDGFKQ
Sequences:
>Translated_73_residues MDESLNACNIHLNRSLNGNTRSRFSNHKNFTFPSYSANKRQFNVRNPQKYSRSLAASISVFEKNSRGLDGFKQ >Mature_73_residues MDESLNACNIHLNRSLNGNTRSRFSNHKNFTFPSYSANKRQFNVRNPQKYSRSLAASISVFEKNSRGLDGFKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8398; Mature: 8398
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDESLNACNIHLNRSLNGNTRSRFSNHKNFTFPSYSANKRQFNVRNPQKYSRSLAASISV CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHE FEKNSRGLDGFKQ ECCCCCCCCCCCC >Mature Secondary Structure MDESLNACNIHLNRSLNGNTRSRFSNHKNFTFPSYSANKRQFNVRNPQKYSRSLAASISV CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHE FEKNSRGLDGFKQ ECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA