| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446588
Identifier: 46446588
GI number: 46446588
Start: 1152243
End: 1152599
Strand: Reverse
Name: 46446588
Synonym: pc0954
Alternate gene names: NA
Gene position: 1152599-1152243 (Counterclockwise)
Preceding gene: 46446591
Following gene: 46446587
Centisome position: 47.74
GC content: 45.38
Gene sequence:
>357_bases ATGGCTAATAAAACTAATCGTCAGACTGAATCCAGTCAAAACCATTCTCAAAGTTCAAATTACAGAAAAAATGCCCAAAC TCGTTATGAGGAAAAAGGTCTGCATCATCCTATGAGTCGCGAAGAAGCTGGCCGCCGAGGAGCAGAAGCTCGTTGGGGAA GAGAACACGATGAAGATTACGATGGACGTAGAAGCCATCGAGGCAGATCTTCAGGTGAGGAGCCTATGAGTCGCGAAGAA GCAGGTCGCCGAGGAGCGGAAGCTCGTTGGGGAAGAGAACATGGTAACGACGATAGCAAAACTTTTTCTGGAAATGATTA TCAAGGCAATACTGATGAGCAAAACGATGAAAGTTAA
Upstream 100 bases:
>100_bases TGCTCCATTAATTTTGTCGATTCAAATTTGAATAAGTCCTTTTATTTGTTTTAGTTGCTAACATTTGAGTACATTCTTTT TTTTTAAAAAGGGGTAACAT
Downstream 100 bases:
>100_bases TATTCATTCATCTTTCTTAAATAAAAAAATAATGTTGTAAAAAATAAATGATAGGAAATCTTGATTTCCTATCTATTTTT CTTTAAGGAACGTTATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MANKTNRQTESSQNHSQSSNYRKNAQTRYEEKGLHHPMSREEAGRRGAEARWGREHDEDYDGRRSHRGRSSGEEPMSREE AGRRGAEARWGREHGNDDSKTFSGNDYQGNTDEQNDES
Sequences:
>Translated_118_residues MANKTNRQTESSQNHSQSSNYRKNAQTRYEEKGLHHPMSREEAGRRGAEARWGREHDEDYDGRRSHRGRSSGEEPMSREE AGRRGAEARWGREHGNDDSKTFSGNDYQGNTDEQNDES >Mature_117_residues ANKTNRQTESSQNHSQSSNYRKNAQTRYEEKGLHHPMSREEAGRRGAEARWGREHDEDYDGRRSHRGRSSGEEPMSREEA GRRGAEARWGREHGNDDSKTFSGNDYQGNTDEQNDES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13612; Mature: 13481
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKTNRQTESSQNHSQSSNYRKNAQTRYEEKGLHHPMSREEAGRRGAEARWGREHDEDY CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCC DGRRSHRGRSSGEEPMSREEAGRRGAEARWGREHGNDDSKTFSGNDYQGNTDEQNDES CCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ANKTNRQTESSQNHSQSSNYRKNAQTRYEEKGLHHPMSREEAGRRGAEARWGREHDEDY CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCC DGRRSHRGRSSGEEPMSREEAGRRGAEARWGREHGNDDSKTFSGNDYQGNTDEQNDES CCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA