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The map label for this gene is yciF [H]

Identifier: 46446587

GI number: 46446587

Start: 1151528

End: 1152052

Strand: Reverse

Name: yciF [H]

Synonym: pc0953

Alternate gene names: 46446587

Gene position: 1152052-1151528 (Counterclockwise)

Preceding gene: 46446588

Following gene: 46446586

Centisome position: 47.71

GC content: 35.43

Gene sequence:

>525_bases
ATGAAACAACAACAAACTGGCTTACATAAATTATTTATTGATGAATTGCAAGACATGTATAGTGCGGAAAAGCAAATTAC
AGAGGCCATGCCCAAATTAACTAAATCAGCTTCTCTACCTGAATTAAAAGAAGCACTCATGGATCATTTGAAAGAAACAA
AAACTCAAGTAGCTCGTCTGGAACAAATCTTTGAGATAATGGGTTTACCAGCCAAAGAAAAACTTTGTAAAGCGATGGAA
GGAATATTGAAAGAAGGAGAAGAGCTCACAAAAATTATGGAAAAATCAACTACATTAGATGCAGCTATTATCAGTGCTGC
ACAAAAAGTTGAGCATTATGAAATTGCTTCTTATGGAACGCTGTGTAGCTTTGCTAAACATCTTCAGTTGAATAGCCAAA
TCCGAGATCTTCTTAAAGATACACTTGATGAAGAAAAGGCTGCGGATAAAAAATTAACAAAGCTTGGAGAAGGCTCATTT
TTTACATCGGGAGTCAATGCTGAAGCCGCAGAAGCAAAAAAATAA

Upstream 100 bases:

>100_bases
CGTTATCGATTCAAAGTTCTTCACGATTGAATTTTTATTAAGCAAGTATTCAATCTCGATTCCTTTTGATGGATAACATA
AAAACATAAAGGATAGGTCA

Downstream 100 bases:

>100_bases
TGCATAAATAAAATTAAAGGTTATTTCTTAAAGGACTTTTTACAAAATGCCTTCTATTTTGTAAAAAGTCCTCTTATTCT
AAACTTATTATTCGAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKQQQTGLHKLFIDELQDMYSAEKQITEAMPKLTKSASLPELKEALMDHLKETKTQVARLEQIFEIMGLPAKEKLCKAME
GILKEGEELTKIMEKSTTLDAAIISAAQKVEHYEIASYGTLCSFAKHLQLNSQIRDLLKDTLDEEKAADKKLTKLGEGSF
FTSGVNAEAAEAKK

Sequences:

>Translated_174_residues
MKQQQTGLHKLFIDELQDMYSAEKQITEAMPKLTKSASLPELKEALMDHLKETKTQVARLEQIFEIMGLPAKEKLCKAME
GILKEGEELTKIMEKSTTLDAAIISAAQKVEHYEIASYGTLCSFAKHLQLNSQIRDLLKDTLDEEKAADKKLTKLGEGSF
FTSGVNAEAAEAKK
>Mature_174_residues
MKQQQTGLHKLFIDELQDMYSAEKQITEAMPKLTKSASLPELKEALMDHLKETKTQVARLEQIFEIMGLPAKEKLCKAME
GILKEGEELTKIMEKSTTLDAAIISAAQKVEHYEIASYGTLCSFAKHLQLNSQIRDLLKDTLDEEKAADKKLTKLGEGSF
FTSGVNAEAAEAKK

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=147, Percent_Identity=48.9795918367347, Blast_Score=126, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 19420; Mature: 19420

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQQTGLHKLFIDELQDMYSAEKQITEAMPKLTKSASLPELKEALMDHLKETKTQVARL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
EQIFEIMGLPAKEKLCKAMEGILKEGEELTKIMEKSTTLDAAIISAAQKVEHYEIASYGT
HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCSFAKHLQLNSQIRDLLKDTLDEEKAADKKLTKLGEGSFFTSGVNAEAAEAKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MKQQQTGLHKLFIDELQDMYSAEKQITEAMPKLTKSASLPELKEALMDHLKETKTQVARL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
EQIFEIMGLPAKEKLCKAMEGILKEGEELTKIMEKSTTLDAAIISAAQKVEHYEIASYGT
HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCSFAKHLQLNSQIRDLLKDTLDEEKAADKKLTKLGEGSFFTSGVNAEAAEAKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]