| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446582
Identifier: 46446582
GI number: 46446582
Start: 1144892
End: 1145539
Strand: Reverse
Name: 46446582
Synonym: pc0948
Alternate gene names: NA
Gene position: 1145539-1144892 (Counterclockwise)
Preceding gene: 46446583
Following gene: 46446581
Centisome position: 47.44
GC content: 36.42
Gene sequence:
>648_bases TTGGTTCTGATGAAATGCCTCATTGAAAATCAAACATGTCATTTTTTGCCTCAAAGAGGAGTTTATTGGGAAGAACAAAA AACGTTGATAATCGCGGATGTTCATTTGGGAAAAGCTACCACGTTTAGAAAAGCAGGCATACTTATTCCGGACGGAAGCA TGGAGGCGGATTTACGGCAACTCAATTTATTGATACAGAACTTACAGCCAGATCATTGTATTGTTGTGGGTGATTTGATT CACGCGACGAGTGGTTTGTCTGAATATGTACAAAATACGTTTACTGATTGGTTAAAAATGCTGCCTTGTGACTTACATTT AGTCATGGGTAATCATGACAAAAACCTTGTTAAACATTTGCCTAAAACATGGTCGTTTCACATTCATGCTAATCATTTCT TGATGGAACCATTCTATTTCTGTCATATTCCTTGCTTACAAAAACCCTGGTTTGTTTGGTCAGGCCATCTTCATCCAAAA ATTGAGCTAAAAAGTAGACATGATCGTTTAAGTTTGCATTGCTTTCAAATTTTTCCTAAGCTTGGTATTTTACCTGCTTT CAGCGAATTTGTTGGAGGTTCATTTGTGAAAAAAGACTCAGATTGTAACATTTTTGGTATCGTGGATTCTTCGGTGATTA AACTTTAA
Upstream 100 bases:
>100_bases AAAAATTTAGCCCCTTTGGATTGGAGTTATTTGTAGAACGCGTTAATGACACTTTATCTACAGAAAGCTTAACAGAGCGA ATTAAGCAAATTCAAAATAG
Downstream 100 bases:
>100_bases TTTCCTTTTTTACTTTGTTAGAAAAACAAAAAATTTCACCTACATAAAATATTTTACATTTTTTTGGTGGGTATTTAAAT TATCATAAATTTTCTATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Serine/Threonine Specific Protein Phosphatase; Phosphoesterase; ICC-Like Phosphoesterase; ICC-Like Phosphoesterase; Calcineurin-Like Phosphoesterase; Phosphoesterase Domain-Containing Protein; ICC-Like Protein Phosphoesterase
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MVLMKCLIENQTCHFLPQRGVYWEEQKTLIIADVHLGKATTFRKAGILIPDGSMEADLRQLNLLIQNLQPDHCIVVGDLI HATSGLSEYVQNTFTDWLKMLPCDLHLVMGNHDKNLVKHLPKTWSFHIHANHFLMEPFYFCHIPCLQKPWFVWSGHLHPK IELKSRHDRLSLHCFQIFPKLGILPAFSEFVGGSFVKKDSDCNIFGIVDSSVIKL
Sequences:
>Translated_215_residues MVLMKCLIENQTCHFLPQRGVYWEEQKTLIIADVHLGKATTFRKAGILIPDGSMEADLRQLNLLIQNLQPDHCIVVGDLI HATSGLSEYVQNTFTDWLKMLPCDLHLVMGNHDKNLVKHLPKTWSFHIHANHFLMEPFYFCHIPCLQKPWFVWSGHLHPK IELKSRHDRLSLHCFQIFPKLGILPAFSEFVGGSFVKKDSDCNIFGIVDSSVIKL >Mature_215_residues MVLMKCLIENQTCHFLPQRGVYWEEQKTLIIADVHLGKATTFRKAGILIPDGSMEADLRQLNLLIQNLQPDHCIVVGDLI HATSGLSEYVQNTFTDWLKMLPCDLHLVMGNHDKNLVKHLPKTWSFHIHANHFLMEPFYFCHIPCLQKPWFVWSGHLHPK IELKSRHDRLSLHCFQIFPKLGILPAFSEFVGGSFVKKDSDCNIFGIVDSSVIKL
Specific function: Unknown
COG id: COG1407
COG function: function code R; Predicted ICC-like phosphoesterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24724; Mature: 24724
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLMKCLIENQTCHFLPQRGVYWEEQKTLIIADVHLGKATTFRKAGILIPDGSMEADLRQ CEEEEEECCCCCEEECCCCCCEECCCCEEEEEEEECCCCCCHHHCCEEECCCCCHHHHHH LNLLIQNLQPDHCIVVGDLIHATSGLSEYVQNTFTDWLKMLPCDLHLVMGNHDKNLVKHL HHHHHHCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHC PKTWSFHIHANHFLMEPFYFCHIPCLQKPWFVWSGHLHPKIELKSRHDRLSLHCFQIFPK CCCEEEEEECCEEEECCHHEEECCCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHH LGILPAFSEFVGGSFVKKDSDCNIFGIVDSSVIKL CCCCHHHHHHHCCCEEECCCCCEEEEEECCHHHCC >Mature Secondary Structure MVLMKCLIENQTCHFLPQRGVYWEEQKTLIIADVHLGKATTFRKAGILIPDGSMEADLRQ CEEEEEECCCCCEEECCCCCCEECCCCEEEEEEEECCCCCCHHHCCEEECCCCCHHHHHH LNLLIQNLQPDHCIVVGDLIHATSGLSEYVQNTFTDWLKMLPCDLHLVMGNHDKNLVKHL HHHHHHCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHC PKTWSFHIHANHFLMEPFYFCHIPCLQKPWFVWSGHLHPKIELKSRHDRLSLHCFQIFPK CCCEEEEEECCEEEECCHHEEECCCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHH LGILPAFSEFVGGSFVKKDSDCNIFGIVDSSVIKL CCCCHHHHHHHCCCEEECCCCCEEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA