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The map label for this gene is cynT [H]

Identifier: 46446564

GI number: 46446564

Start: 1122278

End: 1122928

Strand: Reverse

Name: cynT [H]

Synonym: pc0930

Alternate gene names: 46446564

Gene position: 1122928-1122278 (Counterclockwise)

Preceding gene: 46446565

Following gene: 46446562

Centisome position: 46.51

GC content: 33.64

Gene sequence:

>651_bases
ATGAAAAAACTCATTCAAGGTATTGCCGATTTTAGACAAGGTTTAACTGAAGAAAGTCGTCATCTTTTTGCTAATTTGGC
TCTTGGTCAAACACCTGATGTTCTCTTTATTGCTTGTTCGGATAGTAGGGTTGTCCCAAATTTATTTGCTTCCACGAATC
CTGGTGATTTGTTTGTTCTTCGAAATATTGGAAATTTAATTCCTCCTTTTTCCGTAGATTCAGATAATAGTGCTTTGGCT
GCCATTGAATTTTCTATTTTTTCACTTAATGTTCCCGATATTATTGTTTGTGGCCATTCTGAATGTGGTGCCATGCGTGC
TTTAGTTGAAGGGATACAAGGAAATTGCTGTTCTCATTTACAGTCTTGGCTTAAGCATGGAGAAAACTCTTTAAATTTAG
TGAGAAATGGAATGACAATTAATCCTTCTTTATCCGAGCATAATCAAATTTCTCAAATTAACGTTCTTCAGCAAATAGAG
CATATTAAAAGTTATCCTTTTATTAGAGAAAGATTAGATAAAAACGAACTAAGAATTCATGGGTGGTGGTTTGATATTGC
ACACGCGGATGTTTATTGTTATAAAGAAGATTTTAATCAATTTGTTCTCATCGATGAAAAAGAAGCTCAATTGATTTTAG
CAAGGACATAA

Upstream 100 bases:

>100_bases
AATATTATTTCAAAATAAGGTTGATTGATTTAATTTATAGGCCTTTTTTAAGGAATGCTTTAAGCTTTCCTTGATTCAAA
TTTAAACCAGTTCATAGGTT

Downstream 100 bases:

>100_bases
ATAACTTAGATAGCTTGGTAGCTCATTCATTCACTACATAATGCTCATTAGTCTGCATTTGAATCTCTTTCATTTCATCA
ATTTTTTCTTGTGAGAATAC

Product: putative carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKKLIQGIADFRQGLTEESRHLFANLALGQTPDVLFIACSDSRVVPNLFASTNPGDLFVLRNIGNLIPPFSVDSDNSALA
AIEFSIFSLNVPDIIVCGHSECGAMRALVEGIQGNCCSHLQSWLKHGENSLNLVRNGMTINPSLSEHNQISQINVLQQIE
HIKSYPFIRERLDKNELRIHGWWFDIAHADVYCYKEDFNQFVLIDEKEAQLILART

Sequences:

>Translated_216_residues
MKKLIQGIADFRQGLTEESRHLFANLALGQTPDVLFIACSDSRVVPNLFASTNPGDLFVLRNIGNLIPPFSVDSDNSALA
AIEFSIFSLNVPDIIVCGHSECGAMRALVEGIQGNCCSHLQSWLKHGENSLNLVRNGMTINPSLSEHNQISQINVLQQIE
HIKSYPFIRERLDKNELRIHGWWFDIAHADVYCYKEDFNQFVLIDEKEAQLILART
>Mature_216_residues
MKKLIQGIADFRQGLTEESRHLFANLALGQTPDVLFIACSDSRVVPNLFASTNPGDLFVLRNIGNLIPPFSVDSDNSALA
AIEFSIFSLNVPDIIVCGHSECGAMRALVEGIQGNCCSHLQSWLKHGENSLNLVRNGMTINPSLSEHNQISQINVLQQIE
HIKSYPFIRERLDKNELRIHGWWFDIAHADVYCYKEDFNQFVLIDEKEAQLILART

Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1786534, Length=205, Percent_Identity=33.6585365853659, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI1786318, Length=189, Percent_Identity=31.2169312169312, Blast_Score=91, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI25147564, Length=249, Percent_Identity=31.3253012048193, Blast_Score=126, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI115532990, Length=248, Percent_Identity=28.2258064516129, Blast_Score=110, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6324292, Length=169, Percent_Identity=29.585798816568, Blast_Score=82, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24645213, Length=240, Percent_Identity=31.25, Blast_Score=122, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 24307; Mature: 24307

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIQGIADFRQGLTEESRHLFANLALGQTPDVLFIACSDSRVVPNLFASTNPGDLFVL
CHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCCCCCEEEE
RNIGNLIPPFSVDSDNSALAAIEFSIFSLNVPDIIVCGHSECGAMRALVEGIQGNCCSHL
ECCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCHHHHHHHHHCCCCHHHHHH
QSWLKHGENSLNLVRNGMTINPSLSEHNQISQINVLQQIEHIKSYPFIRERLDKNELRIH
HHHHHCCCCCEEEHCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEE
GWWFDIAHADVYCYKEDFNQFVLIDEKEAQLILART
EEEEEEECCEEEEEECCCCEEEEEECCCCEEEEEEC
>Mature Secondary Structure
MKKLIQGIADFRQGLTEESRHLFANLALGQTPDVLFIACSDSRVVPNLFASTNPGDLFVL
CHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCCCCCEEEE
RNIGNLIPPFSVDSDNSALAAIEFSIFSLNVPDIIVCGHSECGAMRALVEGIQGNCCSHL
ECCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCHHHHHHHHHCCCCHHHHHH
QSWLKHGENSLNLVRNGMTINPSLSEHNQISQINVLQQIEHIKSYPFIRERLDKNELRIH
HHHHHCCCCCEEEHCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEE
GWWFDIAHADVYCYKEDFNQFVLIDEKEAQLILART
EEEEEEECCEEEEEECCCCEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1584776 [H]