| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446540
Identifier: 46446540
GI number: 46446540
Start: 1097384
End: 1098700
Strand: Direct
Name: 46446540
Synonym: pc0906
Alternate gene names: NA
Gene position: 1097384-1098700 (Clockwise)
Preceding gene: 46446538
Following gene: 46446544
Centisome position: 45.45
GC content: 32.5
Gene sequence:
>1317_bases ATGTCAACAATTCTCATTTACACACCTAACGTTGTTCATTCAAAAATGGCAGGGCCTGCAATTCGTTGTTGGGAGCTTGC GAAAGCTTTAAGTTCATCTCATCATGTTATTTTAGTTATTCCTAATCAAACAGAAATGCAAGGAGAAGGATTTCAAATTA TTGCAAAACAAAGCTCTGAATTAAAGCAGTGGATTAAAAAGGCAAAAATATTAATTGCACAAAATTTAACTATATCCATG GCATGGCATGCTAAGAAAAACGGAATTAAAATTATTATCGATGCTTATGATCCCCTACCCCTAGAAATTTTAGAACTTTT TAAAAACGATATCGTTGCCAAAAGAAAAGAAAGTTTAAACTCTTCTCTTAATCAACTTATTTTTAACTTTAAAATGACCG ACGGAATTCTTTGTGCAAGCGAAAAACAAAGAGATTTATGGATAGGATTTTTACTAAGCCAAAAATTAATTACGCTTTCT CGCTATGATCAAGATAAAGGCTTAAGGCAATTTATTGATGTCGTCCCTTTTGGCCTTCCAAACAAAATAGCTAAAAAGGA TGGACCAGGGCTTAAAGAAAAATATTCCTTTAATTCTAAAGATAAAATTCTTTTATGGGGAGGAGGAATTTGGAATTGGT TTGACCCATTAACCCTTATCAAAGCTGTCAAAAAACTTAGCATGACAAGATCGGATATCAAGCTTGTTTTCCTGGGAATT AAGAATCCGGATCCTTCAGTTCCTGAAATGGAGATGGCTTCAAAAGCTATTAAACTTGCTGAAGAATTAAATATTTTAGA TCGTCATGTATTTTTTAACCATGACTGGATTCCTTATAATGAAAGACATAATAGTTTTTTGGACGCCACAATTGGTGTTT CTACTCACTTTGACCATTTAGAAACCCGATATTCTTTTCGAACAAGAATGTTAGATTATATTTGGACTGAACTTCCCATT TTAGCGACCGAAGGTGACTCTTTTGCGGAATTGATTGAACAAAATAAACTGGGAATTACGATTTCTTATAACGATGAGGA ATCTTTAATAAATGCCATTACCTTAATGGTTGATCACCCAGATTTAATAGCCGAATTTCAAAATCAATTAAGATCTATTC GTCCTTTGTTTTATTGGAACAAAATTATTGAACCGATCAACCATATGATAGCGAATTTTGATAAGACGCCTAATCCATCC ATGAATTTTGAAGTGATCAAAATATTGACAACTTTTGTTATCCATCAAGTTTATGAAAAAGGCTTTAAAAATACAGCCAA AATTATTTTAAGGAAAATGTTCAATAAATGGAGATAG
Upstream 100 bases:
>100_bases AAATTAAAAATAAAAAAACTTTTTTGTTTATATGCGAGTAGAATTTGTCAAAATATCAAATTTTTTATAATCTGTGATGA AAATTTAAAGGTTCGAAGCC
Downstream 100 bases:
>100_bases AAAAGAATGAATAATTAAATTTTTGATTGTTTCTTCAGCGAATAATTTTCAAAAAATTGCTTATCAAGCCAGCTAGACAT TTCCACATCTTCAATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyltransferase; Diverged Glycosyltransferase Domain-Containing Protein; Glycosyl Transferase Family Protein; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSTILIYTPNVVHSKMAGPAIRCWELAKALSSSHHVILVIPNQTEMQGEGFQIIAKQSSELKQWIKKAKILIAQNLTISM AWHAKKNGIKIIIDAYDPLPLEILELFKNDIVAKRKESLNSSLNQLIFNFKMTDGILCASEKQRDLWIGFLLSQKLITLS RYDQDKGLRQFIDVVPFGLPNKIAKKDGPGLKEKYSFNSKDKILLWGGGIWNWFDPLTLIKAVKKLSMTRSDIKLVFLGI KNPDPSVPEMEMASKAIKLAEELNILDRHVFFNHDWIPYNERHNSFLDATIGVSTHFDHLETRYSFRTRMLDYIWTELPI LATEGDSFAELIEQNKLGITISYNDEESLINAITLMVDHPDLIAEFQNQLRSIRPLFYWNKIIEPINHMIANFDKTPNPS MNFEVIKILTTFVIHQVYEKGFKNTAKIILRKMFNKWR
Sequences:
>Translated_438_residues MSTILIYTPNVVHSKMAGPAIRCWELAKALSSSHHVILVIPNQTEMQGEGFQIIAKQSSELKQWIKKAKILIAQNLTISM AWHAKKNGIKIIIDAYDPLPLEILELFKNDIVAKRKESLNSSLNQLIFNFKMTDGILCASEKQRDLWIGFLLSQKLITLS RYDQDKGLRQFIDVVPFGLPNKIAKKDGPGLKEKYSFNSKDKILLWGGGIWNWFDPLTLIKAVKKLSMTRSDIKLVFLGI KNPDPSVPEMEMASKAIKLAEELNILDRHVFFNHDWIPYNERHNSFLDATIGVSTHFDHLETRYSFRTRMLDYIWTELPI LATEGDSFAELIEQNKLGITISYNDEESLINAITLMVDHPDLIAEFQNQLRSIRPLFYWNKIIEPINHMIANFDKTPNPS MNFEVIKILTTFVIHQVYEKGFKNTAKIILRKMFNKWR >Mature_437_residues STILIYTPNVVHSKMAGPAIRCWELAKALSSSHHVILVIPNQTEMQGEGFQIIAKQSSELKQWIKKAKILIAQNLTISMA WHAKKNGIKIIIDAYDPLPLEILELFKNDIVAKRKESLNSSLNQLIFNFKMTDGILCASEKQRDLWIGFLLSQKLITLSR YDQDKGLRQFIDVVPFGLPNKIAKKDGPGLKEKYSFNSKDKILLWGGGIWNWFDPLTLIKAVKKLSMTRSDIKLVFLGIK NPDPSVPEMEMASKAIKLAEELNILDRHVFFNHDWIPYNERHNSFLDATIGVSTHFDHLETRYSFRTRMLDYIWTELPIL ATEGDSFAELIEQNKLGITISYNDEESLINAITLMVDHPDLIAEFQNQLRSIRPLFYWNKIIEPINHMIANFDKTPNPSM NFEVIKILTTFVIHQVYEKGFKNTAKIILRKMFNKWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50590; Mature: 50458
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTILIYTPNVVHSKMAGPAIRCWELAKALSSSHHVILVIPNQTEMQGEGFQIIAKQSSE CCEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCHHH LKQWIKKAKILIAQNLTISMAWHAKKNGIKIIIDAYDPLPLEILELFKNDIVAKRKESLN HHHHHHHHHEEEEECCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH SSLNQLIFNFKMTDGILCASEKQRDLWIGFLLSQKLITLSRYDQDKGLRQFIDVVPFGLP HHHHHHHHEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC NKIAKKDGPGLKEKYSFNSKDKILLWGGGIWNWFDPLTLIKAVKKLSMTRSDIKLVFLGI CHHHCCCCCCCCHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE KNPDPSVPEMEMASKAIKLAEELNILDRHVFFNHDWIPYNERHNSFLDATIGVSTHFDHL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCHHHH ETRYSFRTRMLDYIWTELPILATEGDSFAELIEQNKLGITISYNDEESLINAITLMVDHP HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHEECCH DLIAEFQNQLRSIRPLFYWNKIIEPINHMIANFDKTPNPSMNFEVIKILTTFVIHQVYEK HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GFKNTAKIILRKMFNKWR HCHHHHHHHHHHHHHHCC >Mature Secondary Structure STILIYTPNVVHSKMAGPAIRCWELAKALSSSHHVILVIPNQTEMQGEGFQIIAKQSSE CEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCHHH LKQWIKKAKILIAQNLTISMAWHAKKNGIKIIIDAYDPLPLEILELFKNDIVAKRKESLN HHHHHHHHHEEEEECCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH SSLNQLIFNFKMTDGILCASEKQRDLWIGFLLSQKLITLSRYDQDKGLRQFIDVVPFGLP HHHHHHHHEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC NKIAKKDGPGLKEKYSFNSKDKILLWGGGIWNWFDPLTLIKAVKKLSMTRSDIKLVFLGI CHHHCCCCCCCCHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE KNPDPSVPEMEMASKAIKLAEELNILDRHVFFNHDWIPYNERHNSFLDATIGVSTHFDHL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCHHHH ETRYSFRTRMLDYIWTELPILATEGDSFAELIEQNKLGITISYNDEESLINAITLMVDHP HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHEECCH DLIAEFQNQLRSIRPLFYWNKIIEPINHMIANFDKTPNPSMNFEVIKILTTFVIHQVYEK HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GFKNTAKIILRKMFNKWR HCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA