| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446509
Identifier: 46446509
GI number: 46446509
Start: 1057923
End: 1058108
Strand: Reverse
Name: 46446509
Synonym: pc0875
Alternate gene names: NA
Gene position: 1058108-1057923 (Counterclockwise)
Preceding gene: 46446510
Following gene: 46446504
Centisome position: 43.82
GC content: 31.18
Gene sequence:
>186_bases GTGAGTTATCGCTTTGAGAAAAGCTCTAGCCAGCTAGTGACAATAACTCAATTGAGCAGACATTGCTTTTGTTTAAATTT CGAAGTAATTAGTTACAAACTAAGAAAAAATAATGAAAAATTTAATGTTTTTTTTACTTTTAACCGGATCCTTTTGTGTG AATGCAACCGAATGCATGACAAATGA
Upstream 100 bases:
>100_bases ACTTTTTAATTTTTCTTTAATTTTTTCTGGTTTTAACATTTTTCGTTAAAACTTATGAATTACATACCCATTTCCAAAAA GGCTTGTACATAAATAATTC
Downstream 100 bases:
>100_bases TTTCTTAAATCTTTTAAAAAACCAATTTCCGAGTTCTAATGCGCAAGATTCTGATTGTCTATTTAGATGCAATAAATGCC ATCCTAAAGGATCGACAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MSYRFEKSSSQLVTITQLSRHCFCLNFEVISYKLRKNNEKFNVFFTFNRILLCECNRMHDK
Sequences:
>Translated_61_residues MSYRFEKSSSQLVTITQLSRHCFCLNFEVISYKLRKNNEKFNVFFTFNRILLCECNRMHDK >Mature_60_residues SYRFEKSSSQLVTITQLSRHCFCLNFEVISYKLRKNNEKFNVFFTFNRILLCECNRMHDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7460; Mature: 7329
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRFEKSSSQLVTITQLSRHCFCLNFEVISYKLRKNNEKFNVFFTFNRILLCECNRMHD CCEECCCCCCCEEEEEECCCEEEEEEEEEEEEEECCCCCEEEEEEEECEEEEEEECCCCC K C >Mature Secondary Structure SYRFEKSSSQLVTITQLSRHCFCLNFEVISYKLRKNNEKFNVFFTFNRILLCECNRMHD CEECCCCCCCEEEEEECCCEEEEEEEEEEEEEECCCCCEEEEEEEECEEEEEEECCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA