The gene/protein map for NC_005861 is currently unavailable.
Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446502

Identifier: 46446502

GI number: 46446502

Start: 1050549

End: 1050938

Strand: Direct

Name: 46446502

Synonym: pc0868

Alternate gene names: NA

Gene position: 1050549-1050938 (Clockwise)

Preceding gene: 46446499

Following gene: 46446503

Centisome position: 43.51

GC content: 40.51

Gene sequence:

>390_bases
TTGCCCGCGTCAAACGTGCCTCTTCCCATCGTGTCTTTAAAGAGCCACGCTAAGAGGGGAAAAACAACCGTCGGCTGGTG
CTTTGGGTTTAAGCTCCATCTCGTGATTAATCATCATGCAGAAATTGTCGCATTTAAGTTGACAACTGGCAATATTGATG
ATCGCAAACCCGTTCCAGAAATGGTAGAAGGGATGAAAGGAAAAGCATTCGCAGATAGAGGAGATATTTCAGAAAAACTG
ACTCATACTCTCATGCAAAAGGGAATTCATCTTTTCACAAAAGTAAAGAAGAAGATGAAAAATAAATTGATCCCGTTAGT
GGATAAACTCATGCTAAAAAAGAGGGCTATGATTGAAAGTGTGAATCATCTGTTGAAAAGTAGCCGTTAG

Upstream 100 bases:

>100_bases
GTTCCTCATCTGAAGCATTTTTTCCTATGTTTTGCTTTACCTAAGAACACTAAGGGATCTGTGAAGGGATTTTATTGATA
GACTCTACAGGATTAACGGT

Downstream 100 bases:

>100_bases
ATAAAACATCATCGGCGCCGAAGTCGATGGAAGTTTCTTAGCAATCTAATGGCAGGTCTTGCTAGTTATTGTTTGAATCC
ATCCAAGCCTCGACTGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MPASNVPLPIVSLKSHAKRGKTTVGWCFGFKLHLVINHHAEIVAFKLTTGNIDDRKPVPEMVEGMKGKAFADRGDISEKL
THTLMQKGIHLFTKVKKKMKNKLIPLVDKLMLKKRAMIESVNHLLKSSR

Sequences:

>Translated_129_residues
MPASNVPLPIVSLKSHAKRGKTTVGWCFGFKLHLVINHHAEIVAFKLTTGNIDDRKPVPEMVEGMKGKAFADRGDISEKL
THTLMQKGIHLFTKVKKKMKNKLIPLVDKLMLKKRAMIESVNHLLKSSR
>Mature_128_residues
PASNVPLPIVSLKSHAKRGKTTVGWCFGFKLHLVINHHAEIVAFKLTTGNIDDRKPVPEMVEGMKGKAFADRGDISEKLT
HTLMQKGIHLFTKVKKKMKNKLIPLVDKLMLKKRAMIESVNHLLKSSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14521; Mature: 14390

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASNVPLPIVSLKSHAKRGKTTVGWCFGFKLHLVINHHAEIVAFKLTTGNIDDRKPVPE
CCCCCCCCCHHHHHHHHHCCCCEEEEEEHEEEEEEEECCCEEEEEEEEECCCCCCCCCHH
MVEGMKGKAFADRGDISEKLTHTLMQKGIHLFTKVKKKMKNKLIPLVDKLMLKKRAMIES
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNHLLKSSR
HHHHHHCCC
>Mature Secondary Structure 
PASNVPLPIVSLKSHAKRGKTTVGWCFGFKLHLVINHHAEIVAFKLTTGNIDDRKPVPE
CCCCCCCCHHHHHHHHHCCCCEEEEEEHEEEEEEEECCCEEEEEEEEECCCCCCCCCHH
MVEGMKGKAFADRGDISEKLTHTLMQKGIHLFTKVKKKMKNKLIPLVDKLMLKKRAMIES
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNHLLKSSR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA