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The map label for this gene is ypdP [H]

Identifier: 46446501

GI number: 46446501

Start: 1049313

End: 1050011

Strand: Reverse

Name: ypdP [H]

Synonym: pc0867

Alternate gene names: 46446501

Gene position: 1050011-1049313 (Counterclockwise)

Preceding gene: 46446504

Following gene: 46446500

Centisome position: 43.49

GC content: 33.62

Gene sequence:

>699_bases
ATGCGCTATCAAAGCCCCCTCACTTCTTTTGACTACTATTCCCCCATTTGTGCCGTTTTTTGCTTGGTCACTGTATTATC
CAATATTCTTTCCGCAAAAATGGTTTTTCTGCCTCTCTTTCAGTTAAATATCCCGGCAGGATTATTGACCTATCCTTTGA
CTTTTCTATTGAGCGATTTGATTACAGAGCTGCTTGGCGCTAAAAAAGCAAAAGAGATGATTTATACTGGATTGGGAATA
AATATTCTAAGTTTTGGCTTAATCGAAGTAGTGCTTTTATTACCCACTTCTATTGGAAATGACCAAGGAGCTTTTAAAGA
AATCCTTGGATTAAGTGGTCTGAGAATTTTTTCTTCTTTAACAGCCTACCTAATCGCTCAAATTATCGGAATTCAAGTTT
ATGCTTTAATAAAAAAATTCACAGGTTCTCGTTTTCTTTGGCTACGCAGTAATGGAGCGGCTTGCATTTCTCAGTTGCTT
GACTCAATTGTCATTGATATGCTTTATTTTTATTGGGGTCTAGGCATGCCAATATCCTATATTTTACCAATTATTTTCTT
TTCATTTGCTTATAAAACTTTTTTTAATTTTTCGACAACACCTGTTTTTTATTTTATTGTTTATCTTTTCAAAACAGTTT
GGCAGGGAGAAAATTTAAAAAGAAATAAAAAAGAATATCTCATTAAGGACACATCATGA

Upstream 100 bases:

>100_bases
TCACAAAAGTTGACTCTGTTCCCCCCTAATTTCTTTAAATGACTTAAAAAGTCTAAACTTTTAAGATGAATGAATAAATA
ATCAACGAACTAAAAGTTTA

Downstream 100 bases:

>100_bases
AACAAATCACACCATTTAAGATTTTTTTAACTTTTTTTATCAGTTTTTTAGTTTATTTCATTATTTCCTATCAGCAAGCT
GCTGAAAAAGAATCTCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRYQSPLTSFDYYSPICAVFCLVTVLSNILSAKMVFLPLFQLNIPAGLLTYPLTFLLSDLITELLGAKKAKEMIYTGLGI
NILSFGLIEVVLLLPTSIGNDQGAFKEILGLSGLRIFSSLTAYLIAQIIGIQVYALIKKFTGSRFLWLRSNGAACISQLL
DSIVIDMLYFYWGLGMPISYILPIIFFSFAYKTFFNFSTTPVFYFIVYLFKTVWQGENLKRNKKEYLIKDTS

Sequences:

>Translated_232_residues
MRYQSPLTSFDYYSPICAVFCLVTVLSNILSAKMVFLPLFQLNIPAGLLTYPLTFLLSDLITELLGAKKAKEMIYTGLGI
NILSFGLIEVVLLLPTSIGNDQGAFKEILGLSGLRIFSSLTAYLIAQIIGIQVYALIKKFTGSRFLWLRSNGAACISQLL
DSIVIDMLYFYWGLGMPISYILPIIFFSFAYKTFFNFSTTPVFYFIVYLFKTVWQGENLKRNKKEYLIKDTS
>Mature_232_residues
MRYQSPLTSFDYYSPICAVFCLVTVLSNILSAKMVFLPLFQLNIPAGLLTYPLTFLLSDLITELLGAKKAKEMIYTGLGI
NILSFGLIEVVLLLPTSIGNDQGAFKEILGLSGLRIFSSLTAYLIAQIIGIQVYALIKKFTGSRFLWLRSNGAACISQLL
DSIVIDMLYFYWGLGMPISYILPIIFFSFAYKTFFNFSTTPVFYFIVYLFKTVWQGENLKRNKKEYLIKDTS

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 26252; Mature: 26252

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYQSPLTSFDYYSPICAVFCLVTVLSNILSAKMVFLPLFQLNIPAGLLTYPLTFLLSDL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ITELLGAKKAKEMIYTGLGINILSFGLIEVVLLLPTSIGNDQGAFKEILGLSGLRIFSSL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHH
TAYLIAQIIGIQVYALIKKFTGSRFLWLRSNGAACISQLLDSIVIDMLYFYWGLGMPISY
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILPIIFFSFAYKTFFNFSTTPVFYFIVYLFKTVWQGENLKRNKKEYLIKDTS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MRYQSPLTSFDYYSPICAVFCLVTVLSNILSAKMVFLPLFQLNIPAGLLTYPLTFLLSDL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ITELLGAKKAKEMIYTGLGINILSFGLIEVVLLLPTSIGNDQGAFKEILGLSGLRIFSSL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHH
TAYLIAQIIGIQVYALIKKFTGSRFLWLRSNGAACISQLLDSIVIDMLYFYWGLGMPISY
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILPIIFFSFAYKTFFNFSTTPVFYFIVYLFKTVWQGENLKRNKKEYLIKDTS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]