| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446489
Identifier: 46446489
GI number: 46446489
Start: 1037210
End: 1037641
Strand: Reverse
Name: 46446489
Synonym: pc0855
Alternate gene names: NA
Gene position: 1037641-1037210 (Counterclockwise)
Preceding gene: 46446493
Following gene: 46446488
Centisome position: 42.98
GC content: 39.35
Gene sequence:
>432_bases ATGCAACGCACAGAAGTAAAGGTTATTGAAACAACAGTTCAAAAAACTAATTTTTGGTTAAAAGAGCTGTCTGAGCATAT GGGATGGAGTGACCAACATCTCTCTTATATAGCTTTAAGAGCAGTTCTTCATGCTTTAAGAGATCGGCTCCCCATCGAAG TCGTAGCAAAATTGGGAGCTCAGCTTCCTATGCTAATTCGTGGAATTTATTATGAAGGCTGGGTCCCAGCACATACTCCT ATCAAAGTTCATCGGCTTGAGGATTTTCTCTCACTTGTTGCGAATTATTTAGGCAATGATCTGCTCTTTTCAGAGATAGC CCAACTCACAAAAAATGTTTTCATAGTCATGGAAAATCATTTAACCGAAGGAGAAATCGATCACCTTAAAAAGGTGCTGC CAGGTCCCATTACTTCATTTTTTTCTCCATGA
Upstream 100 bases:
>100_bases CAGGCAAAGATTTTTTAATCCTATTTTAACCGAATTGAACTATTATTGAACTATTATTGAACTTAATAAAAAGAAAAAAT TCTCAAGAAGGAGGTAAAAT
Downstream 100 bases:
>100_bases GGGAAGAATTGATCTCTCTGGATAGAGCAGAAAAATTAAAATCTCATTAAGAAAAAAGGTTCTATAGATTGGGAACCGGG TTAAAAAATACAAGCATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MQRTEVKVIETTVQKTNFWLKELSEHMGWSDQHLSYIALRAVLHALRDRLPIEVVAKLGAQLPMLIRGIYYEGWVPAHTP IKVHRLEDFLSLVANYLGNDLLFSEIAQLTKNVFIVMENHLTEGEIDHLKKVLPGPITSFFSP
Sequences:
>Translated_143_residues MQRTEVKVIETTVQKTNFWLKELSEHMGWSDQHLSYIALRAVLHALRDRLPIEVVAKLGAQLPMLIRGIYYEGWVPAHTP IKVHRLEDFLSLVANYLGNDLLFSEIAQLTKNVFIVMENHLTEGEIDHLKKVLPGPITSFFSP >Mature_143_residues MQRTEVKVIETTVQKTNFWLKELSEHMGWSDQHLSYIALRAVLHALRDRLPIEVVAKLGAQLPMLIRGIYYEGWVPAHTP IKVHRLEDFLSLVANYLGNDLLFSEIAQLTKNVFIVMENHLTEGEIDHLKKVLPGPITSFFSP
Specific function: Unknown
COG id: COG5502
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16417; Mature: 16417
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRTEVKVIETTVQKTNFWLKELSEHMGWSDQHLSYIALRAVLHALRDRLPIEVVAKLGA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC QLPMLIRGIYYEGWVPAHTPIKVHRLEDFLSLVANYLGNDLLFSEIAQLTKNVFIVMENH CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCC LTEGEIDHLKKVLPGPITSFFSP CCCCHHHHHHHHCCCCHHHHCCC >Mature Secondary Structure MQRTEVKVIETTVQKTNFWLKELSEHMGWSDQHLSYIALRAVLHALRDRLPIEVVAKLGA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC QLPMLIRGIYYEGWVPAHTPIKVHRLEDFLSLVANYLGNDLLFSEIAQLTKNVFIVMENH CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCC LTEGEIDHLKKVLPGPITSFFSP CCCCHHHHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA