| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446484
Identifier: 46446484
GI number: 46446484
Start: 1032500
End: 1033246
Strand: Reverse
Name: 46446484
Synonym: pc0850
Alternate gene names: NA
Gene position: 1033246-1032500 (Counterclockwise)
Preceding gene: 46446488
Following gene: 46446482
Centisome position: 42.79
GC content: 41.23
Gene sequence:
>747_bases ATGAAACAAAACTTATCCATACTCGAGCAAGGGGATATTTACTTCTTTTATCGTTCGCGTGTCCAAACAAAAAAAGCTCA TCGCCCAGATGATATTCAGAGGCTTTATTTCATCCTAAAAGGAAAGCAAAGTCCTCATTATAGGCTCATCATCGTAGGTA AAAAACAGTTGCCTTCTTATGATGAAAGCCCAATCGAATTTGCTTTTGTAGATACTGTTTCTAAAAGCTTCAAAGAATTA ATTTCAACATTGCAAGAGCAGCATTATGAAACTAAGACACGCGGCGAAAGAGAGCTTCCTGCAGCCCGCCTCCTTGCAGA AGGAAAATATGTTCTTCTTAACGATGGATCAAACACTTATTTAGCCTATCAACTAGACCGGCCTCAAAAATTGGGCCCGC CTCAAAAACAGTTCAACTTGGCAAATGAGGGCAACTGGGTTATCTCTATAAAGAATCCCAAAATTCCCACTGAAAAAGGA CTTTCTCCCCAGCAAAAGGCCGAATTTCCTAAAGAGCTCTTAGAGCAATTTCAAAACCGCAAATTCATCCCCTTAGCTTC TCCAGATTATCTGGGCTACCCAGGTGCAGAGTTACTCCTGATTGGAGAGAAGTCTTCACCGGAAGAAAAATGGGGCAACA CGATTAAAGAATGGTTTATCTCCTTTCCTCACCAGAGTATGAATGAGATGCTTGAAATAGAAAAAAGCTCAATTCCAACT CAGCCGCTCTCCGACGTGAGGGAATAA
Upstream 100 bases:
>100_bases TAGCAAACTTTTCCTCGATTCATATAGATTGCGTGCTTTAATACAATAATAAAAGAGAAAATGATAAAATCTTAAGAGAC AATAAAGAAGGAGGAGAGTT
Downstream 100 bases:
>100_bases GAGGAGATCACTAAGGATGAAATAATCGCTCTTGTATTAGAGAAATTAGATTGGATGCAGCGTGAAAAAATTTGGCCAAA CGGCTTGCGCTATCTTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKQNLSILEQGDIYFFYRSRVQTKKAHRPDDIQRLYFILKGKQSPHYRLIIVGKKQLPSYDESPIEFAFVDTVSKSFKEL ISTLQEQHYETKTRGERELPAARLLAEGKYVLLNDGSNTYLAYQLDRPQKLGPPQKQFNLANEGNWVISIKNPKIPTEKG LSPQQKAEFPKELLEQFQNRKFIPLASPDYLGYPGAELLLIGEKSSPEEKWGNTIKEWFISFPHQSMNEMLEIEKSSIPT QPLSDVRE
Sequences:
>Translated_248_residues MKQNLSILEQGDIYFFYRSRVQTKKAHRPDDIQRLYFILKGKQSPHYRLIIVGKKQLPSYDESPIEFAFVDTVSKSFKEL ISTLQEQHYETKTRGERELPAARLLAEGKYVLLNDGSNTYLAYQLDRPQKLGPPQKQFNLANEGNWVISIKNPKIPTEKG LSPQQKAEFPKELLEQFQNRKFIPLASPDYLGYPGAELLLIGEKSSPEEKWGNTIKEWFISFPHQSMNEMLEIEKSSIPT QPLSDVRE >Mature_248_residues MKQNLSILEQGDIYFFYRSRVQTKKAHRPDDIQRLYFILKGKQSPHYRLIIVGKKQLPSYDESPIEFAFVDTVSKSFKEL ISTLQEQHYETKTRGERELPAARLLAEGKYVLLNDGSNTYLAYQLDRPQKLGPPQKQFNLANEGNWVISIKNPKIPTEKG LSPQQKAEFPKELLEQFQNRKFIPLASPDYLGYPGAELLLIGEKSSPEEKWGNTIKEWFISFPHQSMNEMLEIEKSSIPT QPLSDVRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28734; Mature: 28734
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNLSILEQGDIYFFYRSRVQTKKAHRPDDIQRLYFILKGKQSPHYRLIIVGKKQLPSY CCCCCCEEECCCEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC DESPIEFAFVDTVSKSFKELISTLQEQHYETKTRGERELPAARLLAEGKYVLLNDGSNTY CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEECCCCEE LAYQLDRPQKLGPPQKQFNLANEGNWVISIKNPKIPTEKGLSPQQKAEFPKELLEQFQNR EEEEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHCC KFIPLASPDYLGYPGAELLLIGEKSSPEEKWGNTIKEWFISFPHQSMNEMLEIEKSSIPT CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC QPLSDVRE CCHHHHCC >Mature Secondary Structure MKQNLSILEQGDIYFFYRSRVQTKKAHRPDDIQRLYFILKGKQSPHYRLIIVGKKQLPSY CCCCCCEEECCCEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC DESPIEFAFVDTVSKSFKELISTLQEQHYETKTRGERELPAARLLAEGKYVLLNDGSNTY CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEECCCCEE LAYQLDRPQKLGPPQKQFNLANEGNWVISIKNPKIPTEKGLSPQQKAEFPKELLEQFQNR EEEEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHCC KFIPLASPDYLGYPGAELLLIGEKSSPEEKWGNTIKEWFISFPHQSMNEMLEIEKSSIPT CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC QPLSDVRE CCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA