| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446442
Identifier: 46446442
GI number: 46446442
Start: 987525
End: 987890
Strand: Reverse
Name: 46446442
Synonym: pc0808
Alternate gene names: NA
Gene position: 987890-987525 (Counterclockwise)
Preceding gene: 46446444
Following gene: 46446441
Centisome position: 40.92
GC content: 34.7
Gene sequence:
>366_bases ATGAGATGGACGCACTGCGGCTCAGATTTGGTAAAAAAGAATAGTTATACAAGACATGAAAAGCAAAATTTTCGCTGTTT AGAGTGTGGCAAACAGTGGAGCGAAAACAATGAAGCTAAAATCATTAACGAACAAACAAAGGAACTTGTCAGAAAAACTC TTCTAAAAAGGGTATCTCTTCATGGAATTTGTAGAATTTTTGATGTAAGGATGCCATGGCTGCTAGATTTTATTAATTTC ATTATCAATGATTTGCCTGAGGATTTAAATGTACAAGTCACTTGTCATGAGAAAGACGAGTTGAAAGTGGCTACACTTGA AGTAGATGATCTATGGAGTTTTGTAGGAAACAAGAAAAATGATTAG
Upstream 100 bases:
>100_bases CTTATGTGTGCATATTTGGTAGTGCTAAATAGGTAAGGCTATTTCAATAAACTGATCTAATTTGATAGATTAATTATTCT AATTCAAGCGGAGAAGAGCA
Downstream 100 bases:
>100_bases TAGTTATGGCTCGTCTTACATAAAAAAGTCGCCAAGTGCTCGCTAGGCAAGTGGGTCCTCGAGATAAAAAAACCGCTGAG CTTCTTTTTGCAAAATGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MRWTHCGSDLVKKNSYTRHEKQNFRCLECGKQWSENNEAKIINEQTKELVRKTLLKRVSLHGICRIFDVRMPWLLDFINF IINDLPEDLNVQVTCHEKDELKVATLEVDDLWSFVGNKKND
Sequences:
>Translated_121_residues MRWTHCGSDLVKKNSYTRHEKQNFRCLECGKQWSENNEAKIINEQTKELVRKTLLKRVSLHGICRIFDVRMPWLLDFINF IINDLPEDLNVQVTCHEKDELKVATLEVDDLWSFVGNKKND >Mature_121_residues MRWTHCGSDLVKKNSYTRHEKQNFRCLECGKQWSENNEAKIINEQTKELVRKTLLKRVSLHGICRIFDVRMPWLLDFINF IINDLPEDLNVQVTCHEKDELKVATLEVDDLWSFVGNKKND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14363; Mature: 14363
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWTHCGSDLVKKNSYTRHEKQNFRCLECGKQWSENNEAKIINEQTKELVRKTLLKRVSL CCCCCCCHHHHHCCCCCCHHHCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHH HGICRIFDVRMPWLLDFINFIINDLPEDLNVQVTCHEKDELKVATLEVDDLWSFVGNKKN HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECHHHHHHHHCCCCC D C >Mature Secondary Structure MRWTHCGSDLVKKNSYTRHEKQNFRCLECGKQWSENNEAKIINEQTKELVRKTLLKRVSL CCCCCCCHHHHHCCCCCCHHHCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHH HGICRIFDVRMPWLLDFINFIINDLPEDLNVQVTCHEKDELKVATLEVDDLWSFVGNKKN HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECHHHHHHHHCCCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA