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The map label for this gene is sctU [H]

Identifier: 46446384

GI number: 46446384

Start: 926592

End: 927665

Strand: Reverse

Name: sctU [H]

Synonym: pc0750

Alternate gene names: 46446384

Gene position: 927665-926592 (Counterclockwise)

Preceding gene: 46446389

Following gene: 46446383

Centisome position: 38.42

GC content: 37.62

Gene sequence:

>1074_bases
ATGGGCGACAAAACCGAGAAGGCGACCCCAAAAAAGCTAAAAGATGCAAAAAAAAAGGGGCAAATCGCGAAATCACAAGA
TTTGCCTACTGCCTTTACGTTTATAGCTTCAGTCGCCATCATTCTTGCTCTGGCTTCTAGCCTCTATCATCAATTAGCTA
ATTTTTTGGTTGGAACTTTCCGTTCCGTAAATACGCCGGAACTAAGCGGCGTCATTGTTAATTTATTTTATAAAGCCAAT
GAAGTAATTTTTTTAGCGAGCATCCCCACTATGGCCTTAGTTGCATTGGTTGGAGTAACCATTACATTTTTAACAGTTGG
CCCAGTTTTTGCACCTGAAGTGTTTAAGTTCGATATTAAAAAATTCAACCCCGTCGATAACTTAAAGGCAAAATTTAAAT
TAAAAACACTGGTTGAGCTCCTGAAGTCCGTGATTAAAATTTCTATCGCGTCTTATTTGATTTATAAAGTGATGTATAAT
AGTATCCCGGTTTTGATTCAAACAGTGTCGATGCCCATTTCTGGCGCTTTAATTGTTTTTCATGCTTTTTTAGTCGAGGT
TGTATTAAAGGTTGGATTATTTTTTATTGTTGTTGCGGTTGCAGACTTTATCTACCAAAAGAAAACATTCGCTAAAGAGA
TGATGATGGAAAAATTTGAAGTCAAACAAGAATATAAAAACAGCGAAGGTGATCCGCATATTAAAGGGAAACGACGACAA
ATTGCGCAAGAAATTGCTTATCAAGAGGGACCGACAGGTGGTGTTAAACGTGCCCAAGCAGTTGTCACTAACCCGACTCA
CTTAGCAATCGCAATTGGCTATGAAAGACACATGGATGCAGCTCCTTATATCTTAGCAATGGGTAAAGATGTTTTAGCTG
AACGTATTGTAAAAATTGCTGAAAAAAATGACATCCCTGTTTTAAGGAATATTACTTTAGCGCATATTCTCTGGGAGCAA
GGAGAAATTTATGAATATGTACCTGAAGACACTTATGAAGCCTTAGCAGAAATTATGCGTTGGATTGCCTCTTTAAAAGA
TGGAACTGAAATCCCCGAGCCTCTAAACTTATAA

Upstream 100 bases:

>100_bases
ACAACATTGACAATGGTTAAAAATAGGGATATAATACTATAAGAAGGAATATAGGTTTATTTTTATTGTCATTGCCATTT
CTCTCGGAGGATAAAATCAT

Downstream 100 bases:

>100_bases
GCTTTGAAAAATTATCGGAGAAAAACCTGACATGAATGCCATTCGTAAAATCCTAGATGGAATTACAGCTCGATTAGGCG
GAGATCGCTCGCTCGAAGCA

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MGDKTEKATPKKLKDAKKKGQIAKSQDLPTAFTFIASVAIILALASSLYHQLANFLVGTFRSVNTPELSGVIVNLFYKAN
EVIFLASIPTMALVALVGVTITFLTVGPVFAPEVFKFDIKKFNPVDNLKAKFKLKTLVELLKSVIKISIASYLIYKVMYN
SIPVLIQTVSMPISGALIVFHAFLVEVVLKVGLFFIVVAVADFIYQKKTFAKEMMMEKFEVKQEYKNSEGDPHIKGKRRQ
IAQEIAYQEGPTGGVKRAQAVVTNPTHLAIAIGYERHMDAAPYILAMGKDVLAERIVKIAEKNDIPVLRNITLAHILWEQ
GEIYEYVPEDTYEALAEIMRWIASLKDGTEIPEPLNL

Sequences:

>Translated_357_residues
MGDKTEKATPKKLKDAKKKGQIAKSQDLPTAFTFIASVAIILALASSLYHQLANFLVGTFRSVNTPELSGVIVNLFYKAN
EVIFLASIPTMALVALVGVTITFLTVGPVFAPEVFKFDIKKFNPVDNLKAKFKLKTLVELLKSVIKISIASYLIYKVMYN
SIPVLIQTVSMPISGALIVFHAFLVEVVLKVGLFFIVVAVADFIYQKKTFAKEMMMEKFEVKQEYKNSEGDPHIKGKRRQ
IAQEIAYQEGPTGGVKRAQAVVTNPTHLAIAIGYERHMDAAPYILAMGKDVLAERIVKIAEKNDIPVLRNITLAHILWEQ
GEIYEYVPEDTYEALAEIMRWIASLKDGTEIPEPLNL
>Mature_356_residues
GDKTEKATPKKLKDAKKKGQIAKSQDLPTAFTFIASVAIILALASSLYHQLANFLVGTFRSVNTPELSGVIVNLFYKANE
VIFLASIPTMALVALVGVTITFLTVGPVFAPEVFKFDIKKFNPVDNLKAKFKLKTLVELLKSVIKISIASYLIYKVMYNS
IPVLIQTVSMPISGALIVFHAFLVEVVLKVGLFFIVVAVADFIYQKKTFAKEMMMEKFEVKQEYKNSEGDPHIKGKRRQI
AQEIAYQEGPTGGVKRAQAVVTNPTHLAIAIGYERHMDAAPYILAMGKDVLAERIVKIAEKNDIPVLRNITLAHILWEQG
EIYEYVPEDTYEALAEIMRWIASLKDGTEIPEPLNL

Specific function: May be involved in the export of flagellum proteins [H]

COG id: COG1377

COG function: function code NU; Flagellar biosynthesis pathway, component FlhB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family [H]

Homologues:

Organism=Escherichia coli, GI1788188, Length=354, Percent_Identity=29.3785310734463, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006136
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 39782; Mature: 39650

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDKTEKATPKKLKDAKKKGQIAKSQDLPTAFTFIASVAIILALASSLYHQLANFLVGTF
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSVNTPELSGVIVNLFYKANEVIFLASIPTMALVALVGVTITFLTVGPVFAPEVFKFDIK
CCCCCCCHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHH
KFNPVDNLKAKFKLKTLVELLKSVIKISIASYLIYKVMYNSIPVLIQTVSMPISGALIVF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHH
HAFLVEVVLKVGLFFIVVAVADFIYQKKTFAKEMMMEKFEVKQEYKNSEGDPHIKGKRRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
IAQEIAYQEGPTGGVKRAQAVVTNPTHLAIAIGYERHMDAAPYILAMGKDVLAERIVKIA
HHHHHHHCCCCCCCHHHHHHEECCCCEEEEEECHHHCCCCCCHHHHHCHHHHHHHHHHHH
EKNDIPVLRNITLAHILWEQGEIYEYVPEDTYEALAEIMRWIASLKDGTEIPEPLNL
CCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GDKTEKATPKKLKDAKKKGQIAKSQDLPTAFTFIASVAIILALASSLYHQLANFLVGTF
CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSVNTPELSGVIVNLFYKANEVIFLASIPTMALVALVGVTITFLTVGPVFAPEVFKFDIK
CCCCCCCHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHH
KFNPVDNLKAKFKLKTLVELLKSVIKISIASYLIYKVMYNSIPVLIQTVSMPISGALIVF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHH
HAFLVEVVLKVGLFFIVVAVADFIYQKKTFAKEMMMEKFEVKQEYKNSEGDPHIKGKRRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
IAQEIAYQEGPTGGVKRAQAVVTNPTHLAIAIGYERHMDAAPYILAMGKDVLAERIVKIA
HHHHHHHCCCCCCCHHHHHHEECCCCEEEEEECHHHCCCCCCHHHHHCHHHHHHHHHHHH
EKNDIPVLRNITLAHILWEQGEIYEYVPEDTYEALAEIMRWIASLKDGTEIPEPLNL
CCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8299954; 9384377 [H]