| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446376
Identifier: 46446376
GI number: 46446376
Start: 914588
End: 916123
Strand: Reverse
Name: 46446376
Synonym: pc0742
Alternate gene names: NA
Gene position: 916123-914588 (Counterclockwise)
Preceding gene: 46446378
Following gene: 46446375
Centisome position: 37.94
GC content: 37.57
Gene sequence:
>1536_bases ATGATCAAGTTCTATGTGCAATGCCTACTGATAATCATTTTTTTTCATTTAGAAGGTGTTTCTTCTACCTCAGATCAAAA ACTTAAAACTCTTTATACAAGCCTAAACCCCACCTCTGTTTCGCAACATTTGGCTTTTTATGAATTGTATCCCTCCCATC CTTTAGGGCAGAAAGCACTCCAAGATGCTTGGAACCTTTTAACGGGGAAACAAGAAAAAAATGTATGCTTGAATGGCATT CCTCTTTCTGGCCCCGTTATCCAGGCCCTAATTAATATCGTCAATAAACAACCAAATACTGAGCTAGTTCCTCTCACTTC TCAAGAGCTTGATGAAATAGAAAAGCTATCCAAACGTTTAAGTCACTATAACCTTCAAGGGCATTCTGTTTGGAATGAAA AAGACATCTGGCCTTTACCAACTGAAGAGGTTGATTTGGCACGCGGATTATTTTTGAGTCAATTTGGAAATGATTCCCTG CGTATTCGCACCTATGAAGCGATGATTGATTTAATTGCGCTTCAAATCCTTGCGCGATTACCTCCTAAAGCCTCACCTGA ATTAGTGATCAAGGCAACCAACCAAATGATTTTTGACGAGATGAGATTTCGATTTCCTCCGCAATCCTTGTATGCCAATC ACATCGATGTCTATACATTTTTACCTTCTGTTTTAGATTCTCATCGAGGAGTTTGTCTGGGTGTCTCTATCTTGTATCTG TGCCTCGCTCAGCGATTAAATCTCCAACTTGAAATGGTCACTCCTCCTGGTCATATCTATATTCGTCATCGCTCTAAAGA TAAAGTGATCAATATTGAAACAACGGCAAGAGGAGTTCATCTAGATTGCGAGAAATATTTAAGCATCAATAACCGTTCTT TAAAACACCGGCCTCATAAAGAAGTGATTGGAATGGCTCATTTTAACCAAGCTTCTGTCTATTGGCAGCAAGGACAATTT GAACAGGCTTTTTTAGCTTATCAAAAAGCAGAACCTTATCTCAAAGATGATCCTTTATTGAAAGAGTTAATGGGATATAC ATGCTTATTGACAAACCGCGAAACATTAGGTTTAGAACTGATTAAGAGTATTAAAGATCATATTCCTGATTATGCTGTTG TCAAGTCTACCGTGGCAGAAGATTATTTAAATGGAATGACAGACGCCAAAAGCATTGCTATTTTGTTTTCAAGAACGGAT GAAAATCGAACCGCTTTATTAGCAAAAAAAGACTCTTTAGAAAAAATAATCAATAAATTTCCTCGCTTCCGAGCAGGTTT ATTACAATTAGCTATGACATGGACACAGCTACATCGAGCAGAAAAAGCTTTAGAGAAGCTTAAAGAGCTTGATGCTTTTT ATCCTCACGATCCAGAAGTCAATTATTATTTAGCCATTCTTCATGCACAACGTTTAGATTATCCGCAAGCATGGATTCAT TTAAAGCAAGCAGAGAAATTCACTTTAGCACGAGCTTACGACTGCAAACAATTAAAAGAACTAAGACAAGCTCTTGTCAA AGAATGTCCAGAATAA
Upstream 100 bases:
>100_bases GAAACTGAATGATTCAAAAAGTTATCTTTGAGCACTGTTATGAACTTGAACAAATTTCTTTACTCCAGATATTCTGAATG CAGATTTAATGGAGGGTATT
Downstream 100 bases:
>100_bases TAATCTACGTCAACGAGCATTTATTATAAGAGGTAGCAGCAGTGAAAATTTATACACGTACAGGTGACAAAGGAACGACG TCATTATTTACAGGTAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MIKFYVQCLLIIIFFHLEGVSSTSDQKLKTLYTSLNPTSVSQHLAFYELYPSHPLGQKALQDAWNLLTGKQEKNVCLNGI PLSGPVIQALINIVNKQPNTELVPLTSQELDEIEKLSKRLSHYNLQGHSVWNEKDIWPLPTEEVDLARGLFLSQFGNDSL RIRTYEAMIDLIALQILARLPPKASPELVIKATNQMIFDEMRFRFPPQSLYANHIDVYTFLPSVLDSHRGVCLGVSILYL CLAQRLNLQLEMVTPPGHIYIRHRSKDKVINIETTARGVHLDCEKYLSINNRSLKHRPHKEVIGMAHFNQASVYWQQGQF EQAFLAYQKAEPYLKDDPLLKELMGYTCLLTNRETLGLELIKSIKDHIPDYAVVKSTVAEDYLNGMTDAKSIAILFSRTD ENRTALLAKKDSLEKIINKFPRFRAGLLQLAMTWTQLHRAEKALEKLKELDAFYPHDPEVNYYLAILHAQRLDYPQAWIH LKQAEKFTLARAYDCKQLKELRQALVKECPE
Sequences:
>Translated_511_residues MIKFYVQCLLIIIFFHLEGVSSTSDQKLKTLYTSLNPTSVSQHLAFYELYPSHPLGQKALQDAWNLLTGKQEKNVCLNGI PLSGPVIQALINIVNKQPNTELVPLTSQELDEIEKLSKRLSHYNLQGHSVWNEKDIWPLPTEEVDLARGLFLSQFGNDSL RIRTYEAMIDLIALQILARLPPKASPELVIKATNQMIFDEMRFRFPPQSLYANHIDVYTFLPSVLDSHRGVCLGVSILYL CLAQRLNLQLEMVTPPGHIYIRHRSKDKVINIETTARGVHLDCEKYLSINNRSLKHRPHKEVIGMAHFNQASVYWQQGQF EQAFLAYQKAEPYLKDDPLLKELMGYTCLLTNRETLGLELIKSIKDHIPDYAVVKSTVAEDYLNGMTDAKSIAILFSRTD ENRTALLAKKDSLEKIINKFPRFRAGLLQLAMTWTQLHRAEKALEKLKELDAFYPHDPEVNYYLAILHAQRLDYPQAWIH LKQAEKFTLARAYDCKQLKELRQALVKECPE >Mature_511_residues MIKFYVQCLLIIIFFHLEGVSSTSDQKLKTLYTSLNPTSVSQHLAFYELYPSHPLGQKALQDAWNLLTGKQEKNVCLNGI PLSGPVIQALINIVNKQPNTELVPLTSQELDEIEKLSKRLSHYNLQGHSVWNEKDIWPLPTEEVDLARGLFLSQFGNDSL RIRTYEAMIDLIALQILARLPPKASPELVIKATNQMIFDEMRFRFPPQSLYANHIDVYTFLPSVLDSHRGVCLGVSILYL CLAQRLNLQLEMVTPPGHIYIRHRSKDKVINIETTARGVHLDCEKYLSINNRSLKHRPHKEVIGMAHFNQASVYWQQGQF EQAFLAYQKAEPYLKDDPLLKELMGYTCLLTNRETLGLELIKSIKDHIPDYAVVKSTVAEDYLNGMTDAKSIAILFSRTD ENRTALLAKKDSLEKIINKFPRFRAGLLQLAMTWTQLHRAEKALEKLKELDAFYPHDPEVNYYLAILHAQRLDYPQAWIH LKQAEKFTLARAYDCKQLKELRQALVKECPE
Specific function: Unknown
COG id: COG2912
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58768; Mature: 58768
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFYVQCLLIIIFFHLEGVSSTSDQKLKTLYTSLNPTSVSQHLAFYELYPSHPLGQKAL CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCHHHH QDAWNLLTGKQEKNVCLNGIPLSGPVIQALINIVNKQPNTELVPLTSQELDEIEKLSKRL HHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHH SHYNLQGHSVWNEKDIWPLPTEEVDLARGLFLSQFGNDSLRIRTYEAMIDLIALQILARL HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHC PPKASPELVIKATNQMIFDEMRFRFPPQSLYANHIDVYTFLPSVLDSHRGVCLGVSILYL CCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCEEHHHHHHHH CLAQRLNLQLEMVTPPGHIYIRHRSKDKVINIETTARGVHLDCEKYLSINNRSLKHRPHK HHHHHCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCEEECHHHHHCCCCCCCCCCCHH EVIGMAHFNQASVYWQQGQFEQAFLAYQKAEPYLKDDPLLKELMGYTCLLTNRETLGLEL HHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEECCHHHHHHH IKSIKDHIPDYAVVKSTVAEDYLNGMTDAKSIAILFSRTDENRTALLAKKDSLEKIINKF HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHH PRFRAGLLQLAMTWTQLHRAEKALEKLKELDAFYPHDPEVNYYLAILHAQRLDYPQAWIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCCHHHHH LKQAEKFTLARAYDCKQLKELRQALVKECPE HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKFYVQCLLIIIFFHLEGVSSTSDQKLKTLYTSLNPTSVSQHLAFYELYPSHPLGQKAL CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCHHHH QDAWNLLTGKQEKNVCLNGIPLSGPVIQALINIVNKQPNTELVPLTSQELDEIEKLSKRL HHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHH SHYNLQGHSVWNEKDIWPLPTEEVDLARGLFLSQFGNDSLRIRTYEAMIDLIALQILARL HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHC PPKASPELVIKATNQMIFDEMRFRFPPQSLYANHIDVYTFLPSVLDSHRGVCLGVSILYL CCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCEEHHHHHHHH CLAQRLNLQLEMVTPPGHIYIRHRSKDKVINIETTARGVHLDCEKYLSINNRSLKHRPHK HHHHHCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCEEECHHHHHCCCCCCCCCCCHH EVIGMAHFNQASVYWQQGQFEQAFLAYQKAEPYLKDDPLLKELMGYTCLLTNRETLGLEL HHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEECCHHHHHHH IKSIKDHIPDYAVVKSTVAEDYLNGMTDAKSIAILFSRTDENRTALLAKKDSLEKIINKF HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHH PRFRAGLLQLAMTWTQLHRAEKALEKLKELDAFYPHDPEVNYYLAILHAQRLDYPQAWIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCCHHHHH LKQAEKFTLARAYDCKQLKELRQALVKECPE HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA