Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446363

Identifier: 46446363

GI number: 46446363

Start: 886649

End: 889396

Strand: Reverse

Name: 46446363

Synonym: pc0729

Alternate gene names: NA

Gene position: 889396-886649 (Counterclockwise)

Preceding gene: 46446367

Following gene: 46446362

Centisome position: 36.84

GC content: 32.13

Gene sequence:

>2748_bases
ATGCTGCTTCCCTGTAACATAGTTACTAACATAAATTCTACGATTTTTGTAGATAACGAACAAAATCCTTTATTTCCTTC
TCCTTTAGCTATAAAAATTGGGTTAGAAATCTTCAAATATTTGGAATCGCTAGATCGAGGGCAAGCTAGGCTAGTGTGTA
GGACATGGAAGCAGCTGATTAATAAAGTAGATATTATTGAAAACTATAATATAAGTCTTAAGAGTTCGGCTGGGGTAAGA
CAAGAAGCTACGCATTATTTGCAAAACCCTGAAAAATTAAAAGCCGAGCAGCGCTTTCTTTTAACAATTATTAGGCTCTC
GAAAGATTGCATAAAAATAAAGGTCGCAGCTGCAAATGCCTTGATGATTTTAAAAAAAACCAATTTTTCTTTTATTGGCT
CTGATTTTAGAGGAATTCAAGCCCCTGGTGTTAGGCTTACCCGGGCAATTTTGGATAAAGCTAATTTCTCAGGAGCGAAT
CTAGAAGGAGCGGATTTTACCGCTTGCTCCTTGGAGGACGCTATACTTGATGGCGCGGAGCTTAAAGACGTCCAGTTTGG
GCAACTCCCTTATTTAAACCATCAAAAAAATGTACTCGCTATGGCTGTGTCTCCTAATGGCAAGCATTTGGCTTCCGTTG
ATCAAAATAATTTCTATGTCTGGAACCTGGAAACTTTTGAAGTTGAAAAGCAACTATTGGAAATAGAAAGTCCTCAGCAA
AATTTTCTCCAGTTTTTTCAAAATGGTCAATTTCTCTTTAAAGCAACTAGTAGGAAAGGAGGGAAAACACCACACAAAGC
AAGGATTGAAATATGGAAAATCACACCCTTAGAAATGATTAGCCAATCGATTATCGGAGATAATGACTCTTTTTTGTTAT
TGGCCCTTACTCAAGATGAAAAAACACTTATTAGTGTAGCCGTAAAAGATGATGAAGAATTTTCTAATGGGAAAACAGAA
ATTTGCCTTTGGCAAATAGACTTTAGTGAACAAAATCTTCCCCAACTTACGCTAGTTAGAAAAAAAATAACAAAAGGTTT
AGCACAGGAGTGTAGCTATGCTCCCAAAACCTCTATTATTGCCCTATATGTTTTAGAGAAAAGCTGTATCGAATTTTATT
CTCTTCCTGACTTAGAAATTAAGCAGGAAAAGACATTAAGGCGGCTATTAGGAGAAAAGGGAAAATTCATAAGCAATATG
ATATTTACTCCCCAAGAGAACCAGCTTATTATAAATATCCTTACTGGAATTGATAAAATTGATAGTAAAGTTAAAAGCAA
AGTATATTTTTGGAATATAAAAAATAAGCAAAAAAAATTTTTGTTTTTTGAAGAACATCCTATAAAAAATCTCCATTTTT
TGCCAGATAGCTCACAAATTGCCTACTTTACAGTTTACAACCATAATGCAACCTTTTTTCACATTCGCGACAAAAATTTT
AAACTAAAGTTTAGAGAACGATTTAACTCAAATGATATACTTGGAAGTAAAATTTTAGGTTTTATTTCCAATAGTCAATT
TATCTTCCGACCTAAAATCAAACAAATTTCTATTACCCCCTTAAAAACTTTTGTGGGTAAAAAAGAATTACCTCTGTCTA
TTCACGATATGTATTTTTTTACAAATGAACAAACAATCTCTGCTTGGCATTATGCTTATGATTTACATTATTCCTCAGAA
GACTTCTTTTTTAAAATTATTGAAAATAAACTATATAGTTACCAAATTTTTAATGGGAAAAATCTTGGGTATAAAAACTT
ACCTATACATTTTTCTAAACCAATTTTGAATTGGAATTGTCAGCTTTCTTCTGATGCTCAATACTGTATTCGAACGTATC
CTTCTAAAAGCAATGGCGAAAACAAAATTACTATTTCCCAAGTTGAAAATGAAGAAATACAGGCTTCATATACAGGATCT
TTTTTAAGTTATTTTTTATCAAAAAATAATCGTTACCTCGTCTTTATTTATCAAAACCAACTTAAATTAATTGAAATAGA
TTTCAAAAAATACGATCAATTAGTAGACGTCGATTCCACAGAACAAAAACCTACTGTTTTTTGTCCCTTTCTTTTGAGCA
AAGAAAAAATTGAACATACTTTTTCTGATCCTTTATTTCCCATCACAACTCTTGCCTTAAGAAGTGTTGAAACAGGACAA
ATTAGCTTATGGGAGATTAATTGGGAAACTCAACAAATACAAGAGCTAATTCAGTGGTCAACGGAATTACCCTCCACTAA
TTTTAACTGGTTAGGTCAATCGAAGTTCTATTTTCAACAATCGAACTTCTATTTTAAAAAGAATAAACAAACCCTTGGTA
TATGGAACAAAAAAACGCGTAGAAAGCAAACCATTAAGTTTAAAAATAAGTTAATTGATTTTGTTATATCCCAGAATGGC
CTTTGGATGGTGACTATTGAAAAACTAGTAAGTTCGATGAACGAAAGCGTTTTTTCCAAAAATAAATCCAAGTTTTGCTT
ATGGAATTTAGATCAGAAGAAAAAGCTTGATCAGTTCATTCTTCCTTTTGGTCAATCAATGATCCAACTTTCACCAGATG
GTAAGTTTTTGATTGTTAATCATAGGATTGATTTTGCAGAATTAAGTGTACGGAAAGTAAAGAAAGGAAAGTTTCATCTT
TTATGGAAAACTCCCCATTATTTAAACGTAAAAAAATTGAGTTTGAAGAATACACAAAACTTGGATAAAATAAACGCTTT
ATTGCTTTCTCAATTACAAAATGAATAA

Upstream 100 bases:

>100_bases
AATCAAATAAAAAATGAATTGTCTTATTTTGGTATAGTTTATCACCCTCACAATAGTTAAATAGAACTTTTTCTCATCCT
CTTTTTAGGAGAATTATACG

Downstream 100 bases:

>100_bases
GTATTTGATGAAAATAGGTAGTGCTAAATAAGTAAGGCTATTTTAATAAACTAATTTAATTGAATAGATTAATTGTCCTA
ATTCAAGTGAAGAAAAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 915; Mature: 915

Protein sequence:

>915_residues
MLLPCNIVTNINSTIFVDNEQNPLFPSPLAIKIGLEIFKYLESLDRGQARLVCRTWKQLINKVDIIENYNISLKSSAGVR
QEATHYLQNPEKLKAEQRFLLTIIRLSKDCIKIKVAAANALMILKKTNFSFIGSDFRGIQAPGVRLTRAILDKANFSGAN
LEGADFTACSLEDAILDGAELKDVQFGQLPYLNHQKNVLAMAVSPNGKHLASVDQNNFYVWNLETFEVEKQLLEIESPQQ
NFLQFFQNGQFLFKATSRKGGKTPHKARIEIWKITPLEMISQSIIGDNDSFLLLALTQDEKTLISVAVKDDEEFSNGKTE
ICLWQIDFSEQNLPQLTLVRKKITKGLAQECSYAPKTSIIALYVLEKSCIEFYSLPDLEIKQEKTLRRLLGEKGKFISNM
IFTPQENQLIINILTGIDKIDSKVKSKVYFWNIKNKQKKFLFFEEHPIKNLHFLPDSSQIAYFTVYNHNATFFHIRDKNF
KLKFRERFNSNDILGSKILGFISNSQFIFRPKIKQISITPLKTFVGKKELPLSIHDMYFFTNEQTISAWHYAYDLHYSSE
DFFFKIIENKLYSYQIFNGKNLGYKNLPIHFSKPILNWNCQLSSDAQYCIRTYPSKSNGENKITISQVENEEIQASYTGS
FLSYFLSKNNRYLVFIYQNQLKLIEIDFKKYDQLVDVDSTEQKPTVFCPFLLSKEKIEHTFSDPLFPITTLALRSVETGQ
ISLWEINWETQQIQELIQWSTELPSTNFNWLGQSKFYFQQSNFYFKKNKQTLGIWNKKTRRKQTIKFKNKLIDFVISQNG
LWMVTIEKLVSSMNESVFSKNKSKFCLWNLDQKKKLDQFILPFGQSMIQLSPDGKFLIVNHRIDFAELSVRKVKKGKFHL
LWKTPHYLNVKKLSLKNTQNLDKINALLLSQLQNE

Sequences:

>Translated_915_residues
MLLPCNIVTNINSTIFVDNEQNPLFPSPLAIKIGLEIFKYLESLDRGQARLVCRTWKQLINKVDIIENYNISLKSSAGVR
QEATHYLQNPEKLKAEQRFLLTIIRLSKDCIKIKVAAANALMILKKTNFSFIGSDFRGIQAPGVRLTRAILDKANFSGAN
LEGADFTACSLEDAILDGAELKDVQFGQLPYLNHQKNVLAMAVSPNGKHLASVDQNNFYVWNLETFEVEKQLLEIESPQQ
NFLQFFQNGQFLFKATSRKGGKTPHKARIEIWKITPLEMISQSIIGDNDSFLLLALTQDEKTLISVAVKDDEEFSNGKTE
ICLWQIDFSEQNLPQLTLVRKKITKGLAQECSYAPKTSIIALYVLEKSCIEFYSLPDLEIKQEKTLRRLLGEKGKFISNM
IFTPQENQLIINILTGIDKIDSKVKSKVYFWNIKNKQKKFLFFEEHPIKNLHFLPDSSQIAYFTVYNHNATFFHIRDKNF
KLKFRERFNSNDILGSKILGFISNSQFIFRPKIKQISITPLKTFVGKKELPLSIHDMYFFTNEQTISAWHYAYDLHYSSE
DFFFKIIENKLYSYQIFNGKNLGYKNLPIHFSKPILNWNCQLSSDAQYCIRTYPSKSNGENKITISQVENEEIQASYTGS
FLSYFLSKNNRYLVFIYQNQLKLIEIDFKKYDQLVDVDSTEQKPTVFCPFLLSKEKIEHTFSDPLFPITTLALRSVETGQ
ISLWEINWETQQIQELIQWSTELPSTNFNWLGQSKFYFQQSNFYFKKNKQTLGIWNKKTRRKQTIKFKNKLIDFVISQNG
LWMVTIEKLVSSMNESVFSKNKSKFCLWNLDQKKKLDQFILPFGQSMIQLSPDGKFLIVNHRIDFAELSVRKVKKGKFHL
LWKTPHYLNVKKLSLKNTQNLDKINALLLSQLQNE
>Mature_915_residues
MLLPCNIVTNINSTIFVDNEQNPLFPSPLAIKIGLEIFKYLESLDRGQARLVCRTWKQLINKVDIIENYNISLKSSAGVR
QEATHYLQNPEKLKAEQRFLLTIIRLSKDCIKIKVAAANALMILKKTNFSFIGSDFRGIQAPGVRLTRAILDKANFSGAN
LEGADFTACSLEDAILDGAELKDVQFGQLPYLNHQKNVLAMAVSPNGKHLASVDQNNFYVWNLETFEVEKQLLEIESPQQ
NFLQFFQNGQFLFKATSRKGGKTPHKARIEIWKITPLEMISQSIIGDNDSFLLLALTQDEKTLISVAVKDDEEFSNGKTE
ICLWQIDFSEQNLPQLTLVRKKITKGLAQECSYAPKTSIIALYVLEKSCIEFYSLPDLEIKQEKTLRRLLGEKGKFISNM
IFTPQENQLIINILTGIDKIDSKVKSKVYFWNIKNKQKKFLFFEEHPIKNLHFLPDSSQIAYFTVYNHNATFFHIRDKNF
KLKFRERFNSNDILGSKILGFISNSQFIFRPKIKQISITPLKTFVGKKELPLSIHDMYFFTNEQTISAWHYAYDLHYSSE
DFFFKIIENKLYSYQIFNGKNLGYKNLPIHFSKPILNWNCQLSSDAQYCIRTYPSKSNGENKITISQVENEEIQASYTGS
FLSYFLSKNNRYLVFIYQNQLKLIEIDFKKYDQLVDVDSTEQKPTVFCPFLLSKEKIEHTFSDPLFPITTLALRSVETGQ
ISLWEINWETQQIQELIQWSTELPSTNFNWLGQSKFYFQQSNFYFKKNKQTLGIWNKKTRRKQTIKFKNKLIDFVISQNG
LWMVTIEKLVSSMNESVFSKNKSKFCLWNLDQKKKLDQFILPFGQSMIQLSPDGKFLIVNHRIDFAELSVRKVKKGKFHL
LWKTPHYLNVKKLSLKNTQNLDKINALLLSQLQNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 106314; Mature: 106314

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLPCNIVTNINSTIFVDNEQNPLFPSPLAIKIGLEIFKYLESLDRGQARLVCRTWKQLI
CEECCEEEECCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NKVDIIENYNISLKSSAGVRQEATHYLQNPEKLKAEQRFLLTIIRLSKDCIKIKVAAANA
HHHHHEECCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCE
LMILKKTNFSFIGSDFRGIQAPGVRLTRAILDKANFSGANLEGADFTACSLEDAILDGAE
EEEEEECCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHCCCCC
LKDVQFGQLPYLNHQKNVLAMAVSPNGKHLASVDQNNFYVWNLETFEVEKQLLEIESPQQ
CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCHH
NFLQFFQNGQFLFKATSRKGGKTPHKARIEIWKITPLEMISQSIIGDNDSFLLLALTQDE
HHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHCCCCCCEEEEEEECCC
KTLISVAVKDDEEFSNGKTEICLWQIDFSEQNLPQLTLVRKKITKGLAQECSYAPKTSII
CEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
ALYVLEKSCIEFYSLPDLEIKQEKTLRRLLGEKGKFISNMIFTPQENQLIINILTGIDKI
EEEEEHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHEEECCCCCCEEEEEECCCHHH
DSKVKSKVYFWNIKNKQKKFLFFEEHPIKNLHFLPDSSQIAYFTVYNHNATFFHIRDKNF
HHHHHCEEEEEEECCCCEEEEEEECCCCCCEEECCCCCCEEEEEEEECCEEEEEEECCCE
KLKFRERFNSNDILGSKILGFISNSQFIFRPKIKQISITPLKTFVGKKELPLSIHDMYFF
EEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCEEEECHHHHHCCCCCCCEEEEEEEEE
TNEQTISAWHYAYDLHYSSEDFFFKIIENKLYSYQIFNGKNLGYKNLPIHFSKPILNWNC
ECCCEEEEEEEEEEEEECCCHHHHHEECCCEEEEEEECCCCCCCCCCCEEECCCEEEEEE
QLSSDAQYCIRTYPSKSNGENKITISQVENEEIQASYTGSFLSYFLSKNNRYLVFIYQNQ
EECCCCCHHHCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHCCCCCEEEEEEECC
LKLIEIDFKKYDQLVDVDSTEQKPTVFCPFLLSKEKIEHTFSDPLFPITTLALRSVETGQ
EEEEEEEHHHHHHEECCCCCCCCCEEEEHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCCE
ISLWEINWETQQIQELIQWSTELPSTNFNWLGQSKFYFQQSNFYFKKNKQTLGIWNKKTR
EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEECCCEEEECCCCHH
RKQTIKFKNKLIDFVISQNGLWMVTIEKLVSSMNESVFSKNKSKFCLWNLDQKKKLDQFI
HHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
LPFGQSMIQLSPDGKFLIVNHRIDFAELSVRKVKKGKFHLLWKTPHYLNVKKLSLKNTQN
HCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCC
LDKINALLLSQLQNE
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLPCNIVTNINSTIFVDNEQNPLFPSPLAIKIGLEIFKYLESLDRGQARLVCRTWKQLI
CEECCEEEECCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NKVDIIENYNISLKSSAGVRQEATHYLQNPEKLKAEQRFLLTIIRLSKDCIKIKVAAANA
HHHHHEECCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCE
LMILKKTNFSFIGSDFRGIQAPGVRLTRAILDKANFSGANLEGADFTACSLEDAILDGAE
EEEEEECCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHCCCCC
LKDVQFGQLPYLNHQKNVLAMAVSPNGKHLASVDQNNFYVWNLETFEVEKQLLEIESPQQ
CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCHH
NFLQFFQNGQFLFKATSRKGGKTPHKARIEIWKITPLEMISQSIIGDNDSFLLLALTQDE
HHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHCCCCCCEEEEEEECCC
KTLISVAVKDDEEFSNGKTEICLWQIDFSEQNLPQLTLVRKKITKGLAQECSYAPKTSII
CEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
ALYVLEKSCIEFYSLPDLEIKQEKTLRRLLGEKGKFISNMIFTPQENQLIINILTGIDKI
EEEEEHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHEEECCCCCCEEEEEECCCHHH
DSKVKSKVYFWNIKNKQKKFLFFEEHPIKNLHFLPDSSQIAYFTVYNHNATFFHIRDKNF
HHHHHCEEEEEEECCCCEEEEEEECCCCCCEEECCCCCCEEEEEEEECCEEEEEEECCCE
KLKFRERFNSNDILGSKILGFISNSQFIFRPKIKQISITPLKTFVGKKELPLSIHDMYFF
EEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCEEEECHHHHHCCCCCCCEEEEEEEEE
TNEQTISAWHYAYDLHYSSEDFFFKIIENKLYSYQIFNGKNLGYKNLPIHFSKPILNWNC
ECCCEEEEEEEEEEEEECCCHHHHHEECCCEEEEEEECCCCCCCCCCCEEECCCEEEEEE
QLSSDAQYCIRTYPSKSNGENKITISQVENEEIQASYTGSFLSYFLSKNNRYLVFIYQNQ
EECCCCCHHHCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHCCCCCEEEEEEECC
LKLIEIDFKKYDQLVDVDSTEQKPTVFCPFLLSKEKIEHTFSDPLFPITTLALRSVETGQ
EEEEEEEHHHHHHEECCCCCCCCCEEEEHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCCE
ISLWEINWETQQIQELIQWSTELPSTNFNWLGQSKFYFQQSNFYFKKNKQTLGIWNKKTR
EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEECCCEEEECCCCHH
RKQTIKFKNKLIDFVISQNGLWMVTIEKLVSSMNESVFSKNKSKFCLWNLDQKKKLDQFI
HHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
LPFGQSMIQLSPDGKFLIVNHRIDFAELSVRKVKKGKFHLLWKTPHYLNVKKLSLKNTQN
HCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCC
LDKINALLLSQLQNE
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA