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The map label for this gene is omcB [H]

Identifier: 46446250

GI number: 46446250

Start: 756035

End: 757711

Strand: Reverse

Name: omcB [H]

Synonym: pc0616

Alternate gene names: 46446250

Gene position: 757711-756035 (Counterclockwise)

Preceding gene: 46446251

Following gene: 46446249

Centisome position: 31.38

GC content: 41.92

Gene sequence:

>1677_bases
ATGAGAAAACAACTAGGGATATTAACCTCGTTGGTTTTTTTAGGTGTTTCGGCACTTCTTTGGACAGGCTGTTCCAATTC
ACACGGAAGCAGCGATTATTGCGAACCTTCGGCCCCGATTTGTGCGCCAAGTAAACCAATCTGTCCTCCTGTATGCAAGC
CTTGTTCAGAGCCTTGCAAAACTCTCAATTCATGCCGGCCAGTTTGTGAACCACAGTCATGCGCGGTTCCACAAAAAGCG
ACTAGCAAACCTGCTTACCCTTTAGTTGCTCAAGAGCACTGCCCACCTAAGTGTGCAGCACCTTTAAAGCAATGTAAAGC
TGGACCTGTAGGTGAGTGCTCTACAAATGGGGTAACAGTTAAAGCTCGAAATCCCAAGATGTGTATTCTTGGTGACCAAT
ATCCTCTAGATTTAGAAATTTCTACTAGCTGTGATGTTTGTGAAGTTATTCTAACAACTACTCTTCCTGAAGGTGTAACT
TATTTGAGAAGCCAACCAGAAGCAAAAGTGGATGGCCGTAATGTTGTTTGGTCTTTTGGCAGCATGAACCGAGGACAAAC
TGTTCCAGCTAGAATTTGGTTAAAAAGCGAAAGAGAAGGTGATCTTTGCACATGCTTCTGCGTGAAAGCAACTCCAGTTG
CCTATTGCGCTCTCCTTTGTGCAAAACCTGTTCTTGTTTGTGAAAAACATGCACCAGCTGAAGTTGGTCCAAATGAACCA
ATCAACTATACAATTACTGTAACAAACATTGGTACATGCCCAGCCGAAGATGTTGTCATTACTGACAATATTCCAGATGG
ACTAGAACATGCTAGTGGTCAAAAAACTCTTAACTTTAAGTTAGGCACCTTAGAGCCTTGCCAAACGAAAAAAGTGAACT
TCTGCTTAACAACTTGCCATCGTGGAAACTTCTGCAATACAGCAGTTGTAACAGCTTGCAATGCTAATCAAACATCTTGC
GAAGCTTGCACATGTGTCGCATGCTGCCAAGTTGAATGCCAAAAAGTTGGACCTAAAGAAGTTCCTGTCGGACAAAATGC
TGATTACCAAATCACAGTTGTGAACACAGGTGACAAGTCACTTCATGAAGTTGTTGTTACAGATACAGCTCCTTCTGCAA
CAAGTATTGTGACAGCTTCTGGTGCAAACATTAATGGCAAACAAGCTATTTGGAAACTTAAAGAACTAAAAGCTGGTGAA
AAAGCAACATTCAACGCTACGTTGACAACTTGCACACCTGGCTATTTTGTTAATAGAGTTAATGTCACTAACTGTGAAGG
TTGCAACTCTAGCTGCGAATTTGGTACAAACTGGAAAGGACGCCCAGCTCTTGATGTCGGTATAACAAATTCCGATAATC
CAATTTGTGTTGGTGAAACAAGCCGCTTTAAAGTGATTGTGACTAACAAAGGTCAAGAGTATGATACAAATGTAAATGTT
GTTGTCAACTTCCCAAGCGAGCTTACTCCAGTTAACGCATCTGGTGCATCTGCAGCTCAGTTAAAGGGACAAACAGTTAC
ATTTGCTCCATTCCCAAATCTCGCTCCTCGGCAAACACTTGAGTACTATATCACTGTTAAGGCTAATAGTCGCGGTGATT
TACGTCCTAAAGTGCAAGTAAGCTCGGATTTCATTAAAAATCCGATCACACAAGAAGAGAGCTTAATTGTGAACTAA

Upstream 100 bases:

>100_bases
AGAAAAACTGTAGGGCATGTAACGATACTGACTCTAAATTTATAATTCAAAAGAATTATCCAAAATCTTCTACAACTAAG
ACCTTAACCAAGGAGTCTTT

Downstream 100 bases:

>100_bases
GGTCTGATTTTCTAAATCAGTGATCAAAAGGCAGGTCTTCGGATCTGCCTTTTTCATTTCACAAATCTGAAATTACGCCT
TTTGAATAATTTTTCTAATT

Product: putative 60 kDa cysteine-rich outer membrane protein

Products: NA

Alternate protein names: Large-CRP; 60 kDa cysteine-rich OMP; 60 kDa CRP; 60 kDa outer membrane protein; Cysteine-rich outer membrane protein [H]

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MRKQLGILTSLVFLGVSALLWTGCSNSHGSSDYCEPSAPICAPSKPICPPVCKPCSEPCKTLNSCRPVCEPQSCAVPQKA
TSKPAYPLVAQEHCPPKCAAPLKQCKAGPVGECSTNGVTVKARNPKMCILGDQYPLDLEISTSCDVCEVILTTTLPEGVT
YLRSQPEAKVDGRNVVWSFGSMNRGQTVPARIWLKSEREGDLCTCFCVKATPVAYCALLCAKPVLVCEKHAPAEVGPNEP
INYTITVTNIGTCPAEDVVITDNIPDGLEHASGQKTLNFKLGTLEPCQTKKVNFCLTTCHRGNFCNTAVVTACNANQTSC
EACTCVACCQVECQKVGPKEVPVGQNADYQITVVNTGDKSLHEVVVTDTAPSATSIVTASGANINGKQAIWKLKELKAGE
KATFNATLTTCTPGYFVNRVNVTNCEGCNSSCEFGTNWKGRPALDVGITNSDNPICVGETSRFKVIVTNKGQEYDTNVNV
VVNFPSELTPVNASGASAAQLKGQTVTFAPFPNLAPRQTLEYYITVKANSRGDLRPKVQVSSDFIKNPITQEESLIVN

Sequences:

>Translated_558_residues
MRKQLGILTSLVFLGVSALLWTGCSNSHGSSDYCEPSAPICAPSKPICPPVCKPCSEPCKTLNSCRPVCEPQSCAVPQKA
TSKPAYPLVAQEHCPPKCAAPLKQCKAGPVGECSTNGVTVKARNPKMCILGDQYPLDLEISTSCDVCEVILTTTLPEGVT
YLRSQPEAKVDGRNVVWSFGSMNRGQTVPARIWLKSEREGDLCTCFCVKATPVAYCALLCAKPVLVCEKHAPAEVGPNEP
INYTITVTNIGTCPAEDVVITDNIPDGLEHASGQKTLNFKLGTLEPCQTKKVNFCLTTCHRGNFCNTAVVTACNANQTSC
EACTCVACCQVECQKVGPKEVPVGQNADYQITVVNTGDKSLHEVVVTDTAPSATSIVTASGANINGKQAIWKLKELKAGE
KATFNATLTTCTPGYFVNRVNVTNCEGCNSSCEFGTNWKGRPALDVGITNSDNPICVGETSRFKVIVTNKGQEYDTNVNV
VVNFPSELTPVNASGASAAQLKGQTVTFAPFPNLAPRQTLEYYITVKANSRGDLRPKVQVSSDFIKNPITQEESLIVN
>Mature_558_residues
MRKQLGILTSLVFLGVSALLWTGCSNSHGSSDYCEPSAPICAPSKPICPPVCKPCSEPCKTLNSCRPVCEPQSCAVPQKA
TSKPAYPLVAQEHCPPKCAAPLKQCKAGPVGECSTNGVTVKARNPKMCILGDQYPLDLEISTSCDVCEVILTTTLPEGVT
YLRSQPEAKVDGRNVVWSFGSMNRGQTVPARIWLKSEREGDLCTCFCVKATPVAYCALLCAKPVLVCEKHAPAEVGPNEP
INYTITVTNIGTCPAEDVVITDNIPDGLEHASGQKTLNFKLGTLEPCQTKKVNFCLTTCHRGNFCNTAVVTACNANQTSC
EACTCVACCQVECQKVGPKEVPVGQNADYQITVVNTGDKSLHEVVVTDTAPSATSIVTASGANINGKQAIWKLKELKAGE
KATFNATLTTCTPGYFVNRVNVTNCEGCNSSCEFGTNWKGRPALDVGITNSDNPICVGETSRFKVIVTNKGQEYDTNVNV
VVNFPSELTPVNASGASAAQLKGQTVTFAPFPNLAPRQTLEYYITVKANSRGDLRPKVQVSSDFIKNPITQEESLIVN

Specific function: In elementary bodies (EBs, the infectious stage, which is able to survive outside the host cell) provides the structural integrity of the outer envelope through disulfide cross-links with the small cysteine-rich protein and the major outer membrane porin.

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003506
- InterPro:   IPR001434 [H]

Pfam domain/function: PF03504 Chlam_OMP6; PF01345 DUF11 [H]

EC number: NA

Molecular weight: Translated: 59625; Mature: 59625

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
7.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQLGILTSLVFLGVSALLWTGCSNSHGSSDYCEPSAPICAPSKPICPPVCKPCSEPCK
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHH
TLNSCRPVCEPQSCAVPQKATSKPAYPLVAQEHCPPKCAAPLKQCKAGPVGECSTNGVTV
HHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEE
KARNPKMCILGDQYPLDLEISTSCDVCEVILTTTLPEGVTYLRSQPEAKVDGRNVVWSFG
EECCCCEEEECCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEECC
SMNRGQTVPARIWLKSEREGDLCTCFCVKATPVAYCALLCAKPVLVCEKHAPAEVGPNEP
CCCCCCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHCCCEEEECCCCCCCCCCCCC
INYTITVTNIGTCPAEDVVITDNIPDGLEHASGQKTLNFKLGTLEPCQTKKVNFCLTTCH
CEEEEEEEECCCCCCCCEEEECCCCCHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEC
RGNFCNTAVVTACNANQTSCEACTCVACCQVECQKVGPKEVPVGQNADYQITVVNTGDKS
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
LHEVVVTDTAPSATSIVTASGANINGKQAIWKLKELKAGEKATFNATLTTCTPGYFVNRV
EEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEE
NVTNCEGCNSSCEFGTNWKGRPALDVGITNSDNPICVGETSRFKVIVTNKGQEYDTNVNV
ECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEECCCCCCCCCCEE
VVNFPSELTPVNASGASAAQLKGQTVTFAPFPNLAPRQTLEYYITVKANSRGDLRPKVQV
EEECCCCCCCCCCCCCCHHEECCCEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCEEEE
SSDFIKNPITQEESLIVN
CHHHHCCCCCCCCCEEEC
>Mature Secondary Structure
MRKQLGILTSLVFLGVSALLWTGCSNSHGSSDYCEPSAPICAPSKPICPPVCKPCSEPCK
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHH
TLNSCRPVCEPQSCAVPQKATSKPAYPLVAQEHCPPKCAAPLKQCKAGPVGECSTNGVTV
HHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEE
KARNPKMCILGDQYPLDLEISTSCDVCEVILTTTLPEGVTYLRSQPEAKVDGRNVVWSFG
EECCCCEEEECCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEECC
SMNRGQTVPARIWLKSEREGDLCTCFCVKATPVAYCALLCAKPVLVCEKHAPAEVGPNEP
CCCCCCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHCCCEEEECCCCCCCCCCCCC
INYTITVTNIGTCPAEDVVITDNIPDGLEHASGQKTLNFKLGTLEPCQTKKVNFCLTTCH
CEEEEEEEECCCCCCCCEEEECCCCCHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEC
RGNFCNTAVVTACNANQTSCEACTCVACCQVECQKVGPKEVPVGQNADYQITVVNTGDKS
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
LHEVVVTDTAPSATSIVTASGANINGKQAIWKLKELKAGEKATFNATLTTCTPGYFVNRV
EEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEE
NVTNCEGCNSSCEFGTNWKGRPALDVGITNSDNPICVGETSRFKVIVTNKGQEYDTNVNV
ECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEECCCCCCCCCCEE
VVNFPSELTPVNASGASAAQLKGQTVTFAPFPNLAPRQTLEYYITVKANSRGDLRPKVQV
EEECCCCCCCCCCCCCCHHEECCCEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCEEEE
SSDFIKNPITQEESLIVN
CHHHHCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2402463; 7582008; 10192388; 10684935; 10871362; 10839753 [H]