Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446249

Identifier: 46446249

GI number: 46446249

Start: 754386

End: 755765

Strand: Reverse

Name: 46446249

Synonym: pc0615

Alternate gene names: NA

Gene position: 755765-754386 (Counterclockwise)

Preceding gene: 46446250

Following gene: 46446245

Centisome position: 31.3

GC content: 31.38

Gene sequence:

>1380_bases
ATGGATAATAGTAATTTGAATTATCAGATTTATGCTTGCCTCCCCTTTGTTGAATTAGCAAAAGAAACATGTATTCAATT
TGGAGCTGTTATCTTTTGGCCTGCTTCCCAATATTCAACTTATTTAAATCAAACTGAACATCTTTTTTTTCAAAATTACA
TTTACTCTATTGGTCAAATAAAAGCTAAGGCGGGTAATGAAAAAATTGAGTGGATTAACACAATCAAACTATATCCTAAA
GAAACAACATGTATTTCTATCTCAAATCAAATTCCTGTTTCAGAAAGAGAGGCTGTTTTAGTCAATGCTCTTTATTTGCT
TTATTTTGCTTGTACTTTTCGAGACCTTTACTATGGAAATGAAATTCCTTCTTTTAATGCCTTTAGAAAAATCATTCCTT
GTACTCTCGATTTTATTAAAAACAAAGATAACTGGAAAGACCTTTACATTAATGAGAGTTATCGCGAAGAGACTGTTTGT
ATTCATTTTCTTGATCAAGACATCTGCCAAGGACTGGGAAAAACGCTGCTAACAATTTATCAATCTGCTCCCCATGAAAA
CATGGCTACCATTCATGCCTATAAACGTCTCGTTCGCTCCATCCGATATTTTGTCGATCGCTTCTTTCAACGGTTTGTTA
ATCTTTTTGAAAAGGAAGTCCAGTTTTCTGAATATTTATTTGAACCAGAAGATGTAGTCTTTTTAGCTTCGAGTTTTGAA
GCTTTATTCGATCTTAATGATCAACAAGTCACAGCAGATTTTAAACATAAGCTTCGCCCTCTTCTTCCGTTGAGATTTAC
AAAACCATTAGAGCTATTTTGGAAATGGATTGACGATTTTTATGAAGTCAAACGAAAAATTATTCATGGAGGAACAACTA
CAGATCCTCTTTTTAAATTAAACCCAAATTTTGAAATATCTCATATTTCGATAGGAATTAAGCTTTTTATTTATTCTGTT
TACTATATGCTATATCGTTACCAACTCATTCACTCTACACATGCAGATGCCTATACTCCCCCGGACTTCAAAGGGATACA
TCCTGAAGAAGTTCTTCTATTTTTTTGGACTGAATCAAGTTTATTAAATAAATTAAATGTTTACACGAAGCAGTTTGAAC
AAGGATCTAAAGAAAAAGAATTGCATGCTGATATTCATTTGCTGACAACCTTATTTGTCTCTATGTATGACAGGTATTAT
TTACATCCTCATCTTAATAAAATTAATTTTATTCCATCTTCAATTGAATCTATTTTAATCAATGGACAACAGATTTTAGA
TAGATTAGAAAAGAATAGATCTGTCAAAAATCATCAAAATTTATTGGATATTGTTGCTCTTACATTTTCAGATCGATTAA
AAAAAAGGCTAACTCAATAA

Upstream 100 bases:

>100_bases
TTTAAAAAAATATCTCCTTAGTGAAATATAAAGAAACTTTGAGGAAAATGGCATTCAGTTTGCATAAAAAAATATTTAAA
TTCTTTGATTAAGGTGGATA

Downstream 100 bases:

>100_bases
TAATAGAATGAGCTACGCCCAAATAAATTATTTTAATCTTAAGTAGACAATAGACTCTGAAAAATTTTCACTTCGGCCAG
TAAATTGTTTCTTTCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MDNSNLNYQIYACLPFVELAKETCIQFGAVIFWPASQYSTYLNQTEHLFFQNYIYSIGQIKAKAGNEKIEWINTIKLYPK
ETTCISISNQIPVSEREAVLVNALYLLYFACTFRDLYYGNEIPSFNAFRKIIPCTLDFIKNKDNWKDLYINESYREETVC
IHFLDQDICQGLGKTLLTIYQSAPHENMATIHAYKRLVRSIRYFVDRFFQRFVNLFEKEVQFSEYLFEPEDVVFLASSFE
ALFDLNDQQVTADFKHKLRPLLPLRFTKPLELFWKWIDDFYEVKRKIIHGGTTTDPLFKLNPNFEISHISIGIKLFIYSV
YYMLYRYQLIHSTHADAYTPPDFKGIHPEEVLLFFWTESSLLNKLNVYTKQFEQGSKEKELHADIHLLTTLFVSMYDRYY
LHPHLNKINFIPSSIESILINGQQILDRLEKNRSVKNHQNLLDIVALTFSDRLKKRLTQ

Sequences:

>Translated_459_residues
MDNSNLNYQIYACLPFVELAKETCIQFGAVIFWPASQYSTYLNQTEHLFFQNYIYSIGQIKAKAGNEKIEWINTIKLYPK
ETTCISISNQIPVSEREAVLVNALYLLYFACTFRDLYYGNEIPSFNAFRKIIPCTLDFIKNKDNWKDLYINESYREETVC
IHFLDQDICQGLGKTLLTIYQSAPHENMATIHAYKRLVRSIRYFVDRFFQRFVNLFEKEVQFSEYLFEPEDVVFLASSFE
ALFDLNDQQVTADFKHKLRPLLPLRFTKPLELFWKWIDDFYEVKRKIIHGGTTTDPLFKLNPNFEISHISIGIKLFIYSV
YYMLYRYQLIHSTHADAYTPPDFKGIHPEEVLLFFWTESSLLNKLNVYTKQFEQGSKEKELHADIHLLTTLFVSMYDRYY
LHPHLNKINFIPSSIESILINGQQILDRLEKNRSVKNHQNLLDIVALTFSDRLKKRLTQ
>Mature_459_residues
MDNSNLNYQIYACLPFVELAKETCIQFGAVIFWPASQYSTYLNQTEHLFFQNYIYSIGQIKAKAGNEKIEWINTIKLYPK
ETTCISISNQIPVSEREAVLVNALYLLYFACTFRDLYYGNEIPSFNAFRKIIPCTLDFIKNKDNWKDLYINESYREETVC
IHFLDQDICQGLGKTLLTIYQSAPHENMATIHAYKRLVRSIRYFVDRFFQRFVNLFEKEVQFSEYLFEPEDVVFLASSFE
ALFDLNDQQVTADFKHKLRPLLPLRFTKPLELFWKWIDDFYEVKRKIIHGGTTTDPLFKLNPNFEISHISIGIKLFIYSV
YYMLYRYQLIHSTHADAYTPPDFKGIHPEEVLLFFWTESSLLNKLNVYTKQFEQGSKEKELHADIHLLTTLFVSMYDRYY
LHPHLNKINFIPSSIESILINGQQILDRLEKNRSVKNHQNLLDIVALTFSDRLKKRLTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54361; Mature: 54361

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSNLNYQIYACLPFVELAKETCIQFGAVIFWPASQYSTYLNQTEHLFFQNYIYSIGQI
CCCCCCCEEEEEECHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHE
KAKAGNEKIEWINTIKLYPKETTCISISNQIPVSEREAVLVNALYLLYFACTFRDLYYGN
EECCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
EIPSFNAFRKIIPCTLDFIKNKDNWKDLYINESYREETVCIHFLDQDICQGLGKTLLTIY
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
QSAPHENMATIHAYKRLVRSIRYFVDRFFQRFVNLFEKEVQFSEYLFEPEDVVFLASSFE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
ALFDLNDQQVTADFKHKLRPLLPLRFTKPLELFWKWIDDFYEVKRKIIHGGTTTDPLFKL
HHHCCCCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
NPNFEISHISIGIKLFIYSVYYMLYRYQLIHSTHADAYTPPDFKGIHPEEVLLFFWTESS
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEECHH
LLNKLNVYTKQFEQGSKEKELHADIHLLTTLFVSMYDRYYLHPHLNKINFIPSSIESILI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHH
NGQQILDRLEKNRSVKNHQNLLDIVALTFSDRLKKRLTQ
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNSNLNYQIYACLPFVELAKETCIQFGAVIFWPASQYSTYLNQTEHLFFQNYIYSIGQI
CCCCCCCEEEEEECHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHE
KAKAGNEKIEWINTIKLYPKETTCISISNQIPVSEREAVLVNALYLLYFACTFRDLYYGN
EECCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
EIPSFNAFRKIIPCTLDFIKNKDNWKDLYINESYREETVCIHFLDQDICQGLGKTLLTIY
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
QSAPHENMATIHAYKRLVRSIRYFVDRFFQRFVNLFEKEVQFSEYLFEPEDVVFLASSFE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
ALFDLNDQQVTADFKHKLRPLLPLRFTKPLELFWKWIDDFYEVKRKIIHGGTTTDPLFKL
HHHCCCCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
NPNFEISHISIGIKLFIYSVYYMLYRYQLIHSTHADAYTPPDFKGIHPEEVLLFFWTESS
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEECHH
LLNKLNVYTKQFEQGSKEKELHADIHLLTTLFVSMYDRYYLHPHLNKINFIPSSIESILI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHH
NGQQILDRLEKNRSVKNHQNLLDIVALTFSDRLKKRLTQ
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA