Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is maf [C]

Identifier: 46446244

GI number: 46446244

Start: 752406

End: 752990

Strand: Reverse

Name: maf [C]

Synonym: pc0610

Alternate gene names: 46446244

Gene position: 752990-752406 (Counterclockwise)

Preceding gene: 46446245

Following gene: 46446243

Centisome position: 31.19

GC content: 34.19

Gene sequence:

>585_bases
ATGAAGATAATTTTAGGATCACAATCTCCTCGTCGTAAAGAAATTTTAAATTTTTTTTCTCTTCCCTTTGAACAAGTGAG
CCCTGTCTTTGATGAAGAGACAGTCCCGTTTGGAGGTAACCCAGAACACTATGTTTTAAGTTTATCCGCGGGTAAAACCA
AATCACTTAGATATCAATTTCCTAAAGATATTCTCATTTCTGCAGACACTATTGTTTACAAAGAAGGAAAAGTTTTTGGA
AAACCACGTAGTAAAGAAGAAGCTTTTCAAAATTTACGTGAACTTGCTGGCCATTGGCATTCCGTTTATACAGGAGTTAA
CGTATCAAATGAAAATCAAGAAATTCAACAATTTGAAGAAACAAAAGTTTTATTTAATTCATTGACAGATGATGAAATCC
ATCAATATCAAGAAAAGATTCACTGTGCAGACAAAGCGGGTGGATACATGGTTCAAGGAGCGGGAAGTTTGATCATCAAA
AAGCTGGAAGGATGTTATTATAATGTAATGGGACTTCCTATTAATACTTTGAGATTGTGTCTATCTGAGATAGGCATCGA
TCTCTGGAAATATTTAAAAGATTGA

Upstream 100 bases:

>100_bases
AGATTAAAACTCAGTTGCAACTTTATTGTCCTAAACTTAATTTAGATAAACAAAAAATTCAACTTTTCCCGCAAATATTT
CTAAGCTAGGGATAATAACA

Downstream 100 bases:

>100_bases
TAATTTAAACAATGAGTTTTAAATGAATCTCAATTTAGTCATAAAAGGAGTTTTATTCTCTCTATTTTGTCATTTTTTTT
TGCAAGCAAAAGAAATCCAT

Product: septum formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKIILGSQSPRRKEILNFFSLPFEQVSPVFDEETVPFGGNPEHYVLSLSAGKTKSLRYQFPKDILISADTIVYKEGKVFG
KPRSKEEAFQNLRELAGHWHSVYTGVNVSNENQEIQQFEETKVLFNSLTDDEIHQYQEKIHCADKAGGYMVQGAGSLIIK
KLEGCYYNVMGLPINTLRLCLSEIGIDLWKYLKD

Sequences:

>Translated_194_residues
MKIILGSQSPRRKEILNFFSLPFEQVSPVFDEETVPFGGNPEHYVLSLSAGKTKSLRYQFPKDILISADTIVYKEGKVFG
KPRSKEEAFQNLRELAGHWHSVYTGVNVSNENQEIQQFEETKVLFNSLTDDEIHQYQEKIHCADKAGGYMVQGAGSLIIK
KLEGCYYNVMGLPINTLRLCLSEIGIDLWKYLKD
>Mature_194_residues
MKIILGSQSPRRKEILNFFSLPFEQVSPVFDEETVPFGGNPEHYVLSLSAGKTKSLRYQFPKDILISADTIVYKEGKVFG
KPRSKEEAFQNLRELAGHWHSVYTGVNVSNENQEIQQFEETKVLFNSLTDDEIHQYQEKIHCADKAGGYMVQGAGSLIIK
KLEGCYYNVMGLPINTLRLCLSEIGIDLWKYLKD

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=196, Percent_Identity=33.6734693877551, Blast_Score=103, Evalue=8e-23,
Organism=Homo sapiens, GI291045183, Length=188, Percent_Identity=30.3191489361702, Blast_Score=88, Evalue=4e-18,
Organism=Homo sapiens, GI310133124, Length=121, Percent_Identity=36.3636363636364, Blast_Score=86, Evalue=1e-17,
Organism=Homo sapiens, GI291045181, Length=121, Percent_Identity=36.3636363636364, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1789646, Length=171, Percent_Identity=36.8421052631579, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI87081830, Length=179, Percent_Identity=33.5195530726257, Blast_Score=90, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193202443, Length=188, Percent_Identity=30.8510638297872, Blast_Score=88, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324685, Length=199, Percent_Identity=32.1608040201005, Blast_Score=73, Evalue=3e-14,
Organism=Drosophila melanogaster, GI78706856, Length=194, Percent_Identity=33.5051546391753, Blast_Score=98, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y610_PARUW (Q6MDL5)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_007609.1
- HSSP:   Q02169
- ProteinModelPortal:   Q6MDL5
- SMR:   Q6MDL5
- STRING:   Q6MDL5
- GeneID:   2779478
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc0610
- NMPDR:   fig|264201.1.peg.610
- eggNOG:   COG0424
- HOGENOM:   HBG414045
- OMA:   VVGLPLC
- PhylomeDB:   Q6MDL5
- ProtClustDB:   CLSK2762199
- BioCyc:   CPRO264201:PC0610-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 22113; Mature: 22113

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00213 LIPOCALIN

Important sites: ACT_SITE 32-32

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIILGSQSPRRKEILNFFSLPFEQVSPVFDEETVPFGGNPEHYVLSLSAGKTKSLRYQF
CEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECC
PKDILISADTIVYKEGKVFGKPRSKEEAFQNLRELAGHWHSVYTGVNVSNENQEIQQFEE
CCHHEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
TKVLFNSLTDDEIHQYQEKIHCADKAGGYMVQGAGSLIIKKLEGCYYNVMGLPINTLRLC
HHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCEEEEECCCHHHHHHH
LSEIGIDLWKYLKD
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKIILGSQSPRRKEILNFFSLPFEQVSPVFDEETVPFGGNPEHYVLSLSAGKTKSLRYQF
CEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECC
PKDILISADTIVYKEGKVFGKPRSKEEAFQNLRELAGHWHSVYTGVNVSNENQEIQQFEE
CCHHEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
TKVLFNSLTDDEIHQYQEKIHCADKAGGYMVQGAGSLIIKKLEGCYYNVMGLPINTLRLC
HHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCEEEEECCCHHHHHHH
LSEIGIDLWKYLKD
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA