| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446086
Identifier: 46446086
GI number: 46446086
Start: 580876
End: 582192
Strand: Reverse
Name: 46446086
Synonym: pc0452
Alternate gene names: NA
Gene position: 582192-580876 (Counterclockwise)
Preceding gene: 46446087
Following gene: 46446085
Centisome position: 24.11
GC content: 34.4
Gene sequence:
>1317_bases ATGAAAAAATTTTTTGATCTTTTTTCTTCTAAACTGAAATATCTAATCTCTCGGCAATCTTTCATTTCAAAGCACTTTTT TTTCATATATATAATAAGTCTATTTTTCTTTTTTTATTACCCAACGCATATTTTAGAAGCTACCGACAAGAAAAAAACTC TCTGTCTAAATATGATTGTTAAAAATGAAAAAGAAGTGATTACACGTTGTTTAGCAAGTGTTAAGCCCCTTATTGACTAT TGGGTAATTGTGGATACGGGTTCAACAGACGGAACGCAAGACATTATTAAACAATTCATGCAAGACATTCCTGGTGAATT ACATGAGCGCCCTTGGAAAAATTTTGCTCATAATCGAACGGAAGCTTTAAAACTCGCCTCTAAAAAAACAGACTATCTCT TATTCATCGATGCGGATGAAACATTTACTTATGAACCAAATTTTAAACTTCCTGAACTAAAAAAAGATTTTTACTTTGTT CAAACTAATTTTAATGATACAAGCTATTTTCGAACGCTGATCATTAATAACCACTTAAATTGGAAATGGGTTGGTGTACT TCATGAATTATTACAAGCTACGCCTAATACGGTAGACTGCGAAATTTTGCCAGGCATTACAAACATCGTACGCACCGATG GAGCTCGTTCAAAAGATCCACAAAAATATCAAAAAGATGCAGCTATATTAGAAGAAGCCTTCTTAGAAGAACCCCATAAT TTACGCTACGCTTTTTACCTTGCACAAACATACAAAGATGCTGGTATGAAGGAAAAAGCGATCACCGCTTATAACAAAAG GATAGCTTTAGGTGGATGGGATGAGGAAATCTTTTGGTCTTTGCTACAAATTGGTTTATTACATGAATCTCTTCATGCAA ATCCAAAGACAATTATTGAAAGCTATTTACAAGCTTATCTTTACCGCCCAACAAGAGCAGAACCCCTATACCGACTAGCC CAATATTACCGGTTATCTGAAAATTATTTAAAAGGCTATCAAACTGCCGCTCAAGGCCTTCCTCTTAGAAATAGTCCAGA TCTTTTATTTGTAGAAAAATGGATTTATGATTGGGGATTATTGTTAGAATACTCGATTTGCGCTTATTGGATTGGAAAAT ATGAAGAAGCGCTCTTGGCTTCCTATGCCATGTTAGCACAAGCTAGACTTCCAGAAAATGTACGAGAATGCGTAGAGAGG AATTTAGTTTGGATCAATTTGAAGCTTAAAGAATCGGCTTCTCAGATCAACTTAGTCAAATCTATTTTAAAAACTTCTCT CGAAACTAAAAGTGAAGCCCAAGAAAAAAAACCATAA
Upstream 100 bases:
>100_bases TTGAGTGTTAAAAACGTTAGAAAAGCACCTATAAAAAATTAAAAAAGACTTGTAAATACATTTTTGATGTCATCTCATTA ATAGTTACCAACTCAATTCT
Downstream 100 bases:
>100_bases AAAAATAAAAAAAATTCAATTAATAAACATATACTCTTTTTGGTTTATTTATATATCTACTTGTCAACGGTACAATCTTG TGATATAGTTTGTTCAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Beta 1 4 Glucosyltransferase; Glycosyltransferase; Glycosyltransferase Group 2 Family Protein; Group 2 Family Glycosyltransferase; TPR-Like Glycosyl Transferase Family 2 Protein; Glycosyltransferase Fused TPR-Repeat Domain; TPR Repeat-Containing Glycosyl Transferase; Cellulose Synthase; FkbM Family Methyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MKKFFDLFSSKLKYLISRQSFISKHFFFIYIISLFFFFYYPTHILEATDKKKTLCLNMIVKNEKEVITRCLASVKPLIDY WVIVDTGSTDGTQDIIKQFMQDIPGELHERPWKNFAHNRTEALKLASKKTDYLLFIDADETFTYEPNFKLPELKKDFYFV QTNFNDTSYFRTLIINNHLNWKWVGVLHELLQATPNTVDCEILPGITNIVRTDGARSKDPQKYQKDAAILEEAFLEEPHN LRYAFYLAQTYKDAGMKEKAITAYNKRIALGGWDEEIFWSLLQIGLLHESLHANPKTIIESYLQAYLYRPTRAEPLYRLA QYYRLSENYLKGYQTAAQGLPLRNSPDLLFVEKWIYDWGLLLEYSICAYWIGKYEEALLASYAMLAQARLPENVRECVER NLVWINLKLKESASQINLVKSILKTSLETKSEAQEKKP
Sequences:
>Translated_438_residues MKKFFDLFSSKLKYLISRQSFISKHFFFIYIISLFFFFYYPTHILEATDKKKTLCLNMIVKNEKEVITRCLASVKPLIDY WVIVDTGSTDGTQDIIKQFMQDIPGELHERPWKNFAHNRTEALKLASKKTDYLLFIDADETFTYEPNFKLPELKKDFYFV QTNFNDTSYFRTLIINNHLNWKWVGVLHELLQATPNTVDCEILPGITNIVRTDGARSKDPQKYQKDAAILEEAFLEEPHN LRYAFYLAQTYKDAGMKEKAITAYNKRIALGGWDEEIFWSLLQIGLLHESLHANPKTIIESYLQAYLYRPTRAEPLYRLA QYYRLSENYLKGYQTAAQGLPLRNSPDLLFVEKWIYDWGLLLEYSICAYWIGKYEEALLASYAMLAQARLPENVRECVER NLVWINLKLKESASQINLVKSILKTSLETKSEAQEKKP >Mature_438_residues MKKFFDLFSSKLKYLISRQSFISKHFFFIYIISLFFFFYYPTHILEATDKKKTLCLNMIVKNEKEVITRCLASVKPLIDY WVIVDTGSTDGTQDIIKQFMQDIPGELHERPWKNFAHNRTEALKLASKKTDYLLFIDADETFTYEPNFKLPELKKDFYFV QTNFNDTSYFRTLIINNHLNWKWVGVLHELLQATPNTVDCEILPGITNIVRTDGARSKDPQKYQKDAAILEEAFLEEPHN LRYAFYLAQTYKDAGMKEKAITAYNKRIALGGWDEEIFWSLLQIGLLHESLHANPKTIIESYLQAYLYRPTRAEPLYRLA QYYRLSENYLKGYQTAAQGLPLRNSPDLLFVEKWIYDWGLLLEYSICAYWIGKYEEALLASYAMLAQARLPENVRECVER NLVWINLKLKESASQINLVKSILKTSLETKSEAQEKKP
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51403; Mature: 51403
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFFDLFSSKLKYLISRQSFISKHFFFIYIISLFFFFYYPTHILEATDKKKTLCLNMIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KNEKEVITRCLASVKPLIDYWVIVDTGSTDGTQDIIKQFMQDIPGELHERPWKNFAHNRT CCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHCCHH EALKLASKKTDYLLFIDADETFTYEPNFKLPELKKDFYFVQTNFNDTSYFRTLIINNHLN HHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCEEEEEECCCCHHHHEEEEEECCCC WKWVGVLHELLQATPNTVDCEILPGITNIVRTDGARSKDPQKYQKDAAILEEAFLEEPHN EEHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC LRYAFYLAQTYKDAGMKEKAITAYNKRIALGGWDEEIFWSLLQIGLLHESLHANPKTIIE CEEEEEEHHHHHHCCCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHH SYLQAYLYRPTRAEPLYRLAQYYRLSENYLKGYQTAAQGLPLRNSPDLLFVEKWIYDWGL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHH LLEYSICAYWIGKYEEALLASYAMLAQARLPENVRECVERNLVWINLKLKESASQINLVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEEEECCCHHHHHHHH SILKTSLETKSEAQEKKP HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKFFDLFSSKLKYLISRQSFISKHFFFIYIISLFFFFYYPTHILEATDKKKTLCLNMIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KNEKEVITRCLASVKPLIDYWVIVDTGSTDGTQDIIKQFMQDIPGELHERPWKNFAHNRT CCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHCCHH EALKLASKKTDYLLFIDADETFTYEPNFKLPELKKDFYFVQTNFNDTSYFRTLIINNHLN HHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCEEEEEECCCCHHHHEEEEEECCCC WKWVGVLHELLQATPNTVDCEILPGITNIVRTDGARSKDPQKYQKDAAILEEAFLEEPHN EEHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC LRYAFYLAQTYKDAGMKEKAITAYNKRIALGGWDEEIFWSLLQIGLLHESLHANPKTIIE CEEEEEEHHHHHHCCCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHH SYLQAYLYRPTRAEPLYRLAQYYRLSENYLKGYQTAAQGLPLRNSPDLLFVEKWIYDWGL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHH LLEYSICAYWIGKYEEALLASYAMLAQARLPENVRECVERNLVWINLKLKESASQINLVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEEEECCCHHHHHHHH SILKTSLETKSEAQEKKP HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA