Click here to switch to the map view.

The map label for this gene is rsbW

Identifier: 46446026

GI number: 46446026

Start: 525646

End: 526068

Strand: Direct

Name: rsbW

Synonym: pc0392

Alternate gene names: NA

Gene position: 525646-526068 (Clockwise)

Preceding gene: 46446025

Following gene: 46446028

Centisome position: 21.77

GC content: 30.02

Gene sequence:

>423_bases
ATGCATCAAAAAACATTTTTAGCTAATCTTAGCCAACTTCATGAAATGCTTAGTTTTATTCAATCTTATGGGCAATCTCA
TCATATAAATTCTTACACACTCAATAAAATTGTTGTTGCAGCTGAAGAAGCTCTTGTAAATATTATTCACTATGGATATC
CCGACCAAATTGGAAAAATAGAAATTATTTGTGACAAAACTTCATTAAAACCCGGGATTCACATTTTAATCAAAGATCAA
GGAATCCCTTTCAATCCTGTAAAAAAAGGCTTTTCTAATAAGAAAAACAACTCAACGAATTTGAAGATTGGAGGATATGG
AATTTATCTTTATGTCGAAATTATGGATAAAGTAGAATATCAAAGAGGTAAGGAGGGCAATATCCTTTCTTTGATTAAAT
ACATTATGGATCCTGAACAATAA

Upstream 100 bases:

>100_bases
TGATGCTGCACATGACGCTGTCATGTATCCATTAAATCGACAATTAGCCGAAAAAATTGTAGATTATGTGACCCAAAGTT
GGTAAATATGCAGTAAATCT

Downstream 100 bases:

>100_bases
TTTAAAACTTAGAAAATGCATTTAAAATCATAGATTGTAAGAGTCTTTTAGTTGAGATAGTTGCTGTTCATTGTCTTGAA
TTTCTGCCAAAAAACTTTCT

Product: putative rsbW, negative regulator of sigma-B activity (switch protein/serine kinase)

Products: NA

Alternate protein names: Anti-Sigma Regulatory Factor; Serine-Protein Kinase; Regulator Of Sigma Subunit-Histidine Kinase; RsbW Protein

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MHQKTFLANLSQLHEMLSFIQSYGQSHHINSYTLNKIVVAAEEALVNIIHYGYPDQIGKIEIICDKTSLKPGIHILIKDQ
GIPFNPVKKGFSNKKNNSTNLKIGGYGIYLYVEIMDKVEYQRGKEGNILSLIKYIMDPEQ

Sequences:

>Translated_140_residues
MHQKTFLANLSQLHEMLSFIQSYGQSHHINSYTLNKIVVAAEEALVNIIHYGYPDQIGKIEIICDKTSLKPGIHILIKDQ
GIPFNPVKKGFSNKKNNSTNLKIGGYGIYLYVEIMDKVEYQRGKEGNILSLIKYIMDPEQ
>Mature_140_residues
MHQKTFLANLSQLHEMLSFIQSYGQSHHINSYTLNKIVVAAEEALVNIIHYGYPDQIGKIEIICDKTSLKPGIHILIKDQ
GIPFNPVKKGFSNKKNNSTNLKIGGYGIYLYVEIMDKVEYQRGKEGNILSLIKYIMDPEQ

Specific function: Unknown

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15940; Mature: 15940

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQKTFLANLSQLHEMLSFIQSYGQSHHINSYTLNKIVVAAEEALVNIIHYGYPDQIGKI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEE
EIICDKTSLKPGIHILIKDQGIPFNPVKKGFSNKKNNSTNLKIGGYGIYLYVEIMDKVEY
EEEEECCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCEEEECCEEEEEEEEEHHHHHH
QRGKEGNILSLIKYIMDPEQ
HCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MHQKTFLANLSQLHEMLSFIQSYGQSHHINSYTLNKIVVAAEEALVNIIHYGYPDQIGKI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEE
EIICDKTSLKPGIHILIKDQGIPFNPVKKGFSNKKNNSTNLKIGGYGIYLYVEIMDKVEY
EEEEECCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCEEEECCEEEEEEEEEHHHHHH
QRGKEGNILSLIKYIMDPEQ
HCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA