| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is uhpC [H]
Identifier: 46446021
GI number: 46446021
Start: 516386
End: 517768
Strand: Direct
Name: uhpC [H]
Synonym: pc0387
Alternate gene names: 46446021
Gene position: 516386-517768 (Clockwise)
Preceding gene: 46446015
Following gene: 46446022
Centisome position: 21.39
GC content: 37.02
Gene sequence:
>1383_bases GTGAATAAATTGCTCAATTTGCTGCAACCAGCTCCCCATATTCCTGAATTAAAAGACCAAGAGCTTGTCAAAGATCAATA TAAATATTGGCGTATTCGCATTCTTTATTCGATGTTCATAGGATATGCTTTCTATTATTTTACTCGAAAAAGTTTTACTT TTGCGATGCCTGGTCTTATTCAAGATTTGGGCTTTGATAAAAGCCAGTTAGGAATTTTAGGAAGTATTCTTTCAATTACG TATGGAGTGAGTAAATTTGCAAGTGGGATCATTGGAGATCGTACTAACTCTCGTTATATGATGGCCATTGGGTTAATGTT AACGGGCATTTGTAATATTTGTTTTGGGCTTTCTTCTTCTATTTTCTTTTTTGCCCTATTTTGGGGTCTTAATGGATGGT TTCAGGGATTTGGTTGGCCTCCTTGTGCGCGCTTTTTAACTCAATGGTATTCACATTCAGAGAGAGGTTCGTGGTGGTCC ACATGGAATGTTTCACATAATGTAGGCGGTTTTTTAATCCCCTGGATAGCAGGAATTACTCTTCAATATTTTGGCTGGCG TTATGCCATGTATATTCCTGGAATTTTATGCATCCTCATCAGTTTTTTCTTAATCAATCGTTTAAGAGATACTCCGCAGT CTCTTGGATTACCTCCTATTGAAAAATACCGTAATGATTATGTGGATAAAGCTGAGGCAGACAAAGAGGCTGAACAATTA ACAACAAAACAACTATTAGTCAATTTTGTTCTTAAAAATTCCTATATTTGGATATTAGCGCTCGCCTATTTTTTTGTTTA TGCCGTGCGAACAGGAATCAATGATTGGACAGCTTTATTTTTAGTTGAATCCAAAGGATATAGTAGCATTGGAGCAAATG GATGTGTTTCTTTATTTGAAGTTGGCGGATTTTTTGGAAGTCTAGCTGCTGGTTGGTCATCAGATAAACTTTTCGGCGCA AAAAGAGGACCTATTAATGTTCTATTTACACTAGGAATGTTTGCTTTTATTGCCATTTTTTGGATGATACCCTCTGGCTA TTTGTTATTTGATTCTGTCCTCATGTTTTGTATAGGTTTTTCTATTTTTGGCCCACAAATGATGATTGGTTTAGCGGCTG CAGAACTGTCTCATAAAAAAGCGGTGGCAACTTCAACTGGATTTGTTGGTTTTTTTGCTTATATCGGAGCTGCTTTTGCA GGCTATCCCTTGGGATATATCACTCAGCAATGGGGATGGCAAGGTTTTTATTGGGCTTTAATGGGATGTTGTATTATTGC ACTATTTCTACTTATTCCACTTTGGTCAGTTTCTGCCACCACTTTAAAGCCTAAAAATAAATCGAGTTCTCCTGTTAGTT CGCCTGCGTTAGCTTCTAAATAA
Upstream 100 bases:
>100_bases AACCAACCTGAACCTAAGCTGAATGCGGCAATTGCAGCCTGTTCAAACGTTAATTAAATTCGGTTTGCTATAGCCTTAGG ATGAACTTTAAGGAGACCTT
Downstream 100 bases:
>100_bases GAAGATAAAAAACTACAGTAAAATAAATTTGCAATTTGGAACTTCTTTAATAGTTGATTCCATTTTGCAGTTTATTTTTT TTTGACAATAAAATCTACTT
Product: regulatory protein uhpC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MNKLLNLLQPAPHIPELKDQELVKDQYKYWRIRILYSMFIGYAFYYFTRKSFTFAMPGLIQDLGFDKSQLGILGSILSIT YGVSKFASGIIGDRTNSRYMMAIGLMLTGICNICFGLSSSIFFFALFWGLNGWFQGFGWPPCARFLTQWYSHSERGSWWS TWNVSHNVGGFLIPWIAGITLQYFGWRYAMYIPGILCILISFFLINRLRDTPQSLGLPPIEKYRNDYVDKAEADKEAEQL TTKQLLVNFVLKNSYIWILALAYFFVYAVRTGINDWTALFLVESKGYSSIGANGCVSLFEVGGFFGSLAAGWSSDKLFGA KRGPINVLFTLGMFAFIAIFWMIPSGYLLFDSVLMFCIGFSIFGPQMMIGLAAAELSHKKAVATSTGFVGFFAYIGAAFA GYPLGYITQQWGWQGFYWALMGCCIIALFLLIPLWSVSATTLKPKNKSSSPVSSPALASK
Sequences:
>Translated_460_residues MNKLLNLLQPAPHIPELKDQELVKDQYKYWRIRILYSMFIGYAFYYFTRKSFTFAMPGLIQDLGFDKSQLGILGSILSIT YGVSKFASGIIGDRTNSRYMMAIGLMLTGICNICFGLSSSIFFFALFWGLNGWFQGFGWPPCARFLTQWYSHSERGSWWS TWNVSHNVGGFLIPWIAGITLQYFGWRYAMYIPGILCILISFFLINRLRDTPQSLGLPPIEKYRNDYVDKAEADKEAEQL TTKQLLVNFVLKNSYIWILALAYFFVYAVRTGINDWTALFLVESKGYSSIGANGCVSLFEVGGFFGSLAAGWSSDKLFGA KRGPINVLFTLGMFAFIAIFWMIPSGYLLFDSVLMFCIGFSIFGPQMMIGLAAAELSHKKAVATSTGFVGFFAYIGAAFA GYPLGYITQQWGWQGFYWALMGCCIIALFLLIPLWSVSATTLKPKNKSSSPVSSPALASK >Mature_460_residues MNKLLNLLQPAPHIPELKDQELVKDQYKYWRIRILYSMFIGYAFYYFTRKSFTFAMPGLIQDLGFDKSQLGILGSILSIT YGVSKFASGIIGDRTNSRYMMAIGLMLTGICNICFGLSSSIFFFALFWGLNGWFQGFGWPPCARFLTQWYSHSERGSWWS TWNVSHNVGGFLIPWIAGITLQYFGWRYAMYIPGILCILISFFLINRLRDTPQSLGLPPIEKYRNDYVDKAEADKEAEQL TTKQLLVNFVLKNSYIWILALAYFFVYAVRTGINDWTALFLVESKGYSSIGANGCVSLFEVGGFFGSLAAGWSSDKLFGA KRGPINVLFTLGMFAFIAIFWMIPSGYLLFDSVLMFCIGFSIFGPQMMIGLAAAELSHKKAVATSTGFVGFFAYIGAAFA GYPLGYITQQWGWQGFYWALMGCCIIALFLLIPLWSVSATTLKPKNKSSSPVSSPALASK
Specific function: Transport protein for sugar phosphate uptake [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Homo sapiens, GI256219598, Length=428, Percent_Identity=34.1121495327103, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI4503847, Length=428, Percent_Identity=34.1121495327103, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI256219483, Length=428, Percent_Identity=34.1121495327103, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI256219543, Length=448, Percent_Identity=33.7053571428571, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI256219564, Length=354, Percent_Identity=32.4858757062147, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI46361976, Length=390, Percent_Identity=26.4102564102564, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI38093649, Length=466, Percent_Identity=24.4635193133047, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI223717983, Length=466, Percent_Identity=24.4635193133047, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI49619231, Length=450, Percent_Identity=26.4444444444444, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI14150047, Length=167, Percent_Identity=28.1437125748503, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI87082310, Length=430, Percent_Identity=46.5116279069767, Blast_Score=423, Evalue=1e-119, Organism=Escherichia coli, GI1788573, Length=437, Percent_Identity=40.5034324942792, Blast_Score=320, Evalue=1e-88, Organism=Escherichia coli, GI2367259, Length=411, Percent_Identity=32.8467153284672, Blast_Score=195, Evalue=4e-51, Organism=Escherichia coli, GI1789152, Length=459, Percent_Identity=24.6187363834423, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI2367379, Length=457, Percent_Identity=23.1947483588621, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI133901854, Length=472, Percent_Identity=23.5169491525424, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17561094, Length=413, Percent_Identity=24.9394673123487, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI133901856, Length=454, Percent_Identity=23.3480176211454, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17542316, Length=444, Percent_Identity=22.5225225225225, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI133930953, Length=431, Percent_Identity=22.2737819025522, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17539138, Length=288, Percent_Identity=26.0416666666667, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24656861, Length=477, Percent_Identity=24.3186582809224, Blast_Score=112, Evalue=7e-25, Organism=Drosophila melanogaster, GI24656866, Length=477, Percent_Identity=24.3186582809224, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI45550478, Length=477, Percent_Identity=24.3186582809224, Blast_Score=111, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51635; Mature: 51635
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLLNLLQPAPHIPELKDQELVKDQYKYWRIRILYSMFIGYAFYYFTRKSFTFAMPGLI CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHH QDLGFDKSQLGILGSILSITYGVSKFASGIIGDRTNSRYMMAIGLMLTGICNICFGLSSS HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IFFFALFWGLNGWFQGFGWPPCARFLTQWYSHSERGSWWSTWNVSHNVGGFLIPWIAGIT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHH LQYFGWRYAMYIPGILCILISFFLINRLRDTPQSLGLPPIEKYRNDYVDKAEADKEAEQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHH TTKQLLVNFVLKNSYIWILALAYFFVYAVRTGINDWTALFLVESKGYSSIGANGCVSLFE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHH VGGFFGSLAAGWSSDKLFGAKRGPINVLFTLGMFAFIAIFWMIPSGYLLFDSVLMFCIGF HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SIFGPQMMIGLAAAELSHKKAVATSTGFVGFFAYIGAAFAGYPLGYITQQWGWQGFYWAL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH MGCCIIALFLLIPLWSVSATTLKPKNKSSSPVSSPALASK HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKLLNLLQPAPHIPELKDQELVKDQYKYWRIRILYSMFIGYAFYYFTRKSFTFAMPGLI CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHH QDLGFDKSQLGILGSILSITYGVSKFASGIIGDRTNSRYMMAIGLMLTGICNICFGLSSS HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IFFFALFWGLNGWFQGFGWPPCARFLTQWYSHSERGSWWSTWNVSHNVGGFLIPWIAGIT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHH LQYFGWRYAMYIPGILCILISFFLINRLRDTPQSLGLPPIEKYRNDYVDKAEADKEAEQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHH TTKQLLVNFVLKNSYIWILALAYFFVYAVRTGINDWTALFLVESKGYSSIGANGCVSLFE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHH VGGFFGSLAAGWSSDKLFGAKRGPINVLFTLGMFAFIAIFWMIPSGYLLFDSVLMFCIGF HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SIFGPQMMIGLAAAELSHKKAVATSTGFVGFFAYIGAAFAGYPLGYITQQWGWQGFYWAL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH MGCCIIALFLLIPLWSVSATTLKPKNKSSSPVSSPALASK HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]