The gene/protein map for NC_011283 is currently unavailable.
Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is ppa

Identifier: 46445970

GI number: 46445970

Start: 458803

End: 460611

Strand: Reverse

Name: ppa

Synonym: pc0336

Alternate gene names: NA

Gene position: 460611-458803 (Counterclockwise)

Preceding gene: 46445971

Following gene: 46445969

Centisome position: 19.08

GC content: 37.65

Gene sequence:

>1809_bases
ATGCATATTTATAATACAAGATTTAATCCTAGTAATTTCATTGCCAATACGAATATTCATACTTACTATCGATCGAACAA
TCGTTTAAAATTTTCTGAACGAATTAGTTTATTATGCAAAAAAATTTTTCAGTCCTCCCTGCACCCATTCTTTACCTATA
TCAATAGAGATCAATTTCAGTCTCAATGGAGAGAGATTTTTTGGGGGCGAAAGGAGATTGTTATTTCTAAAAGAACTCGC
ACTCAGGAAACTTTTGATAATCCTAAGGATGAAAACAAACTCTTAGTAACTTCTTTAGCTGCCATAGAAGAAATTGGGAC
ATCCACAATTCAACCTTCCAATCCTCTGCCTTTCCCCCAAGAAGAATTTAAACTGAGCTTTCAGGATGAAACATCTCTAA
TCATCCCTAGTTCCCAACTATCTTTGTTAATGGAAAAATCGCCCTATTTTAAGAGTCTCTGGTCGGGAAATTTTCAAGAA
ACTCTTCGAGATCCTCTTACTTTGACACAAAAAGAGTTTATTCATCTGCTTAACTGCCTAATGGATGCTAATTTTAAAGT
TTCTGAGGAAGATATCCCTTCTTTCATTCAACTAGCCGATTATTATCAACTGACGGAAGTTGTGAAGAATTTAGGGGAGC
AGTTGCTTGACATATATAAATCCAAGAAATTTGAGCTATTTAATTCTAGCGAAGATAGCCTAGTGGAATTAAAAGAAGTT
TTAAATTTTGCGCGGCAATATCAATTAAACACTTTAAAAAATTATTTAGAACTCACAGTTGTGAGTTCATTATTAAACCA
GACTTCCCAATTAACGGAATTTGAAAAAATTTTAAAGCATTTCTCAAATGAGATAGAAAGACTCGATTTTTTAGAGAATG
ATTATTTGACTGACACCCATCTCTTAGTTTTAAAAAATTGTAAAAATTTAAAAGAACTTTATCTTCAAAGATGCCACAAT
CTCACGGATGCTGGATTAGCACATTTAGCCCCCTTACTGGCTTTGCAACATTTAGATTTAAGTGAATGCAATAATCTTAC
TGATGCTGGATTAGCGCATTTAACTCCCTTAATGGCTTTACAGCATTTAAACTTGAGCTATTGTAAGAATCTCACTGACG
CTGGATTAGCACATTTGACACCTTTAGTGGCTTTGCAGTATTTAGATCTAAGTGGATGCGATAATCTCACGGATGCTGGA
TTAGCGCATTTAACTCCCTTAATGGCTTTGCAGCATTTAGGTCTGAGTGCATGCGATAAGCTCACTGACGCTGGCTTAGC
GCATTTGACACCCTTAGTAGCTTTACAGTATTTAAGTTTGAATGGATGCGATAAGCTTACTGACGTTGGATTAGCGCATT
TGACACCTTTAGTGGCTTTAACGCATTTAAATCTGAGTTGGTGCGATAAGCTCACCGATGCAGGATTAGCACATTTAACT
CCCTTGGTGGCTTTACAGCATTTGAACCTGCGTTGGTGCCGTAAGCTCACGGACGCCGGATTAGCGCATTTGACTCCCTT
AGTGGCTCTGCAGCATTTAGATCTAAATAGATGCCCTAAGCTCACGGACGCTGGATTAGCGCATTTGACTTCCTTAGTAA
ATTTACGGCATTTAAACTTGAGCTATTGTAGAAAGCTTACTGACGTTGGATTAGCACATTTAACTCCCTTGGTGGCTTTA
CAGCATTTGAATCTAAGTTGTTGCCGTAAGCTCACGGACGCCGGATTAGCGCATTTAGCCTCCTTGCTGGCTTTACAGCA
TTTAGATCTAAGTGGATGCGATAAGCTCACTGATGCTGTGCTGGAATAA

Upstream 100 bases:

>100_bases
AGAGCATTTCTCTTTTTAACTTTAATTACATATTTAATTTTACTAAAATTGATTGTATATAATATAATTAAAAACTATTT
AGCTAATTTAAAGGATAATT

Downstream 100 bases:

>100_bases
CGCATTTGACTCCCTTAGTGGCTTTACAACATTTGAATGAGATTATGCCCTAACCACACGTGCTGGAATAACGCATTTTA
CAACTTTGGCTTTAAAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MHIYNTRFNPSNFIANTNIHTYYRSNNRLKFSERISLLCKKIFQSSLHPFFTYINRDQFQSQWREIFWGRKEIVISKRTR
TQETFDNPKDENKLLVTSLAAIEEIGTSTIQPSNPLPFPQEEFKLSFQDETSLIIPSSQLSLLMEKSPYFKSLWSGNFQE
TLRDPLTLTQKEFIHLLNCLMDANFKVSEEDIPSFIQLADYYQLTEVVKNLGEQLLDIYKSKKFELFNSSEDSLVELKEV
LNFARQYQLNTLKNYLELTVVSSLLNQTSQLTEFEKILKHFSNEIERLDFLENDYLTDTHLLVLKNCKNLKELYLQRCHN
LTDAGLAHLAPLLALQHLDLSECNNLTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDNLTDAG
LAHLTPLMALQHLGLSACDKLTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLTPLVALTHLNLSWCDKLTDAGLAHLT
PLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDLNRCPKLTDAGLAHLTSLVNLRHLNLSYCRKLTDVGLAHLTPLVAL
QHLNLSCCRKLTDAGLAHLASLLALQHLDLSGCDKLTDAVLE

Sequences:

>Translated_602_residues
MHIYNTRFNPSNFIANTNIHTYYRSNNRLKFSERISLLCKKIFQSSLHPFFTYINRDQFQSQWREIFWGRKEIVISKRTR
TQETFDNPKDENKLLVTSLAAIEEIGTSTIQPSNPLPFPQEEFKLSFQDETSLIIPSSQLSLLMEKSPYFKSLWSGNFQE
TLRDPLTLTQKEFIHLLNCLMDANFKVSEEDIPSFIQLADYYQLTEVVKNLGEQLLDIYKSKKFELFNSSEDSLVELKEV
LNFARQYQLNTLKNYLELTVVSSLLNQTSQLTEFEKILKHFSNEIERLDFLENDYLTDTHLLVLKNCKNLKELYLQRCHN
LTDAGLAHLAPLLALQHLDLSECNNLTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDNLTDAG
LAHLTPLMALQHLGLSACDKLTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLTPLVALTHLNLSWCDKLTDAGLAHLT
PLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDLNRCPKLTDAGLAHLTSLVNLRHLNLSYCRKLTDVGLAHLTPLVAL
QHLNLSCCRKLTDAGLAHLASLLALQHLDLSGCDKLTDAVLE
>Mature_602_residues
MHIYNTRFNPSNFIANTNIHTYYRSNNRLKFSERISLLCKKIFQSSLHPFFTYINRDQFQSQWREIFWGRKEIVISKRTR
TQETFDNPKDENKLLVTSLAAIEEIGTSTIQPSNPLPFPQEEFKLSFQDETSLIIPSSQLSLLMEKSPYFKSLWSGNFQE
TLRDPLTLTQKEFIHLLNCLMDANFKVSEEDIPSFIQLADYYQLTEVVKNLGEQLLDIYKSKKFELFNSSEDSLVELKEV
LNFARQYQLNTLKNYLELTVVSSLLNQTSQLTEFEKILKHFSNEIERLDFLENDYLTDTHLLVLKNCKNLKELYLQRCHN
LTDAGLAHLAPLLALQHLDLSECNNLTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDNLTDAG
LAHLTPLMALQHLGLSACDKLTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLTPLVALTHLNLSWCDKLTDAGLAHLT
PLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDLNRCPKLTDAGLAHLTSLVNLRHLNLSYCRKLTDVGLAHLTPLVAL
QHLNLSCCRKLTDAGLAHLASLLALQHLDLSGCDKLTDAVLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=315, Percent_Identity=34.6031746031746, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI161333852, Length=290, Percent_Identity=30.3448275862069, Blast_Score=116, Evalue=8e-26,
Organism=Homo sapiens, GI284447308, Length=325, Percent_Identity=32, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI6912466, Length=289, Percent_Identity=32.1799307958478, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI161333854, Length=363, Percent_Identity=26.4462809917355, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI27734755, Length=401, Percent_Identity=28.6783042394015, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI296531375, Length=368, Percent_Identity=29.6195652173913, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI289666746, Length=262, Percent_Identity=35.8778625954198, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI284447314, Length=251, Percent_Identity=31.8725099601594, Blast_Score=83, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI25151694, Length=353, Percent_Identity=29.1784702549575, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI25151696, Length=353, Percent_Identity=29.1784702549575, Blast_Score=99, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6322549, Length=363, Percent_Identity=27.5482093663912, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI17647819, Length=318, Percent_Identity=36.1635220125786, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24662818, Length=260, Percent_Identity=36.5384615384615, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI21357913, Length=296, Percent_Identity=31.0810810810811, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI161076545, Length=374, Percent_Identity=29.144385026738, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24652783, Length=374, Percent_Identity=29.144385026738, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI161076549, Length=374, Percent_Identity=29.144385026738, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI161076547, Length=374, Percent_Identity=29.144385026738, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI19921840, Length=343, Percent_Identity=28.2798833819242, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24646754, Length=299, Percent_Identity=31.1036789297659, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68034; Mature: 68034

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIYNTRFNPSNFIANTNIHTYYRSNNRLKFSERISLLCKKIFQSSLHPFFTYINRDQFQ
CCCCCCCCCCCCCEECCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SQWREIFWGRKEIVISKRTRTQETFDNPKDENKLLVTSLAAIEEIGTSTIQPSNPLPFPQ
HHHHHHHCCCHHEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH
EEFKLSFQDETSLIIPSSQLSLLMEKSPYFKSLWSGNFQETLRDPLTLTQKEFIHLLNCL
HHHEEEECCCCCEEECHHHHHHHHHCCCHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHH
MDANFKVSEEDIPSFIQLADYYQLTEVVKNLGEQLLDIYKSKKFELFNSSEDSLVELKEV
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
LNFARQYQLNTLKNYLELTVVSSLLNQTSQLTEFEKILKHFSNEIERLDFLENDYLTDTH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LLVLKNCKNLKELYLQRCHNLTDAGLAHLAPLLALQHLDLSECNNLTDAGLAHLTPLMAL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHH
QHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDNLTDAGLAHLTPLMALQHLGLSACDK
HHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHCCHHHHHH
LTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLTPLVALTHLNLSWCDKLTDAGLAHLT
HHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH
PLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDLNRCPKLTDAGLAHLTSLVNLRHLNL
HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCCH
SYCRKLTDVGLAHLTPLVALQHLNLSCCRKLTDAGLAHLASLLALQHLDLSGCDKLTDAV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LE
CC
>Mature Secondary Structure
MHIYNTRFNPSNFIANTNIHTYYRSNNRLKFSERISLLCKKIFQSSLHPFFTYINRDQFQ
CCCCCCCCCCCCCEECCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SQWREIFWGRKEIVISKRTRTQETFDNPKDENKLLVTSLAAIEEIGTSTIQPSNPLPFPQ
HHHHHHHCCCHHEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH
EEFKLSFQDETSLIIPSSQLSLLMEKSPYFKSLWSGNFQETLRDPLTLTQKEFIHLLNCL
HHHEEEECCCCCEEECHHHHHHHHHCCCHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHH
MDANFKVSEEDIPSFIQLADYYQLTEVVKNLGEQLLDIYKSKKFELFNSSEDSLVELKEV
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
LNFARQYQLNTLKNYLELTVVSSLLNQTSQLTEFEKILKHFSNEIERLDFLENDYLTDTH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LLVLKNCKNLKELYLQRCHNLTDAGLAHLAPLLALQHLDLSECNNLTDAGLAHLTPLMAL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHH
QHLNLSYCKNLTDAGLAHLTPLVALQYLDLSGCDNLTDAGLAHLTPLMALQHLGLSACDK
HHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHCCHHHHHH
LTDAGLAHLTPLVALQYLSLNGCDKLTDVGLAHLTPLVALTHLNLSWCDKLTDAGLAHLT
HHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH
PLVALQHLNLRWCRKLTDAGLAHLTPLVALQHLDLNRCPKLTDAGLAHLTSLVNLRHLNL
HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCCH
SYCRKLTDVGLAHLTPLVALQHLNLSCCRKLTDAGLAHLASLLALQHLDLSGCDKLTDAV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA