The gene/protein map for NC_005861 is currently unavailable.
Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is ppaA

Identifier: 46445968

GI number: 46445968

Start: 453695

End: 455545

Strand: Reverse

Name: ppaA

Synonym: pc0334

Alternate gene names: NA

Gene position: 455545-453695 (Counterclockwise)

Preceding gene: 46445969

Following gene: 46445967

Centisome position: 18.87

GC content: 37.22

Gene sequence:

>1851_bases
ATGCATATTCATAATCCAAGTTTTAATCGGCAAACTCTCATTGCCAATGCAGATACTCACCTCTACTATCGATCGAATGA
TCATTTAAGGTTTTCTGAACGAATAAATTTATTATGCAAAACAATTTTTCAGAACTTTCTGAACCTATTCTTTAACTATA
TCAATAGAGATCAGCTTCAATCTCAATGGAGAGAGATCTTTTGGGGGCGAAAAGAGATTGCCACAACTCGTCCAGAATCT
AGTGTATCTTTATCAAGCTCGACTCAAACTTCAGTTTTTGTCCTCCCTTCTTCAGAAAAGGCTCGCACTCAGGAAACTAT
TGATAATTCTAAGGACGAAAACAAACCCTTAGTAAATTCTTTAGCTGGCATAGAAGAAATTGAGGCATCCACAATTCAAC
CTTCTAATCCTTTGCCTTTTCCCCAAGAAGAATTTAAACTGAGCTTTCTGGATAAAACATCTCTAAACATCTCTAGCTCT
CAACTATCTTTGTTAATGGAAAAATCGCTCTATTTTAAGAGCCTTTGGTCAGGAAATTTCAAAGAAACTCTTCGAGATCC
TCTCACTTTGACACAAAAAGAGTTTATTCATCTGCTTAATTGCCTGTTAGATGCTAATTATAAAGTTCCTTTAAAAAAAA
TTTGTTCTTTCATTCAATTAGCCGACTATTATCAACTGACAGAGGTTGTGAAGAATTTAGAACAACGGTTGCTTGACGCA
TATAAATCCAAGAAATTTGAGCTATTTAACTCTAGCGAAGATAGCTTAGTGAAATTAAAAGAACTTTTAAATTTTGCGCA
GCAATACCAATTAAACACTTTAAAAAATTATTTAGAACTCACAGTGGTAAGTTCATTATTAAACCAGGCTTCTCATTTAA
CAGAATTTGAAAAAATTATAAATTACTTTGCAAATGCAATAGAAGGGCTCAATTTTTCAGAATATGCTTATCTAACAGAT
ATTCATCTCTTAGCATTAAAAAGCTGGGAGCTTACTGACGCTAGATTAGCGCATTTGGCTCCCTTAGTAAATTTACGGCA
TTTAAATCTGAGTGGGGACATGTCCAATCTCACGGATGCTGGATTAGCGCATTTGACACCCTTAGTCAATTTACAGCATC
TGAATCTGCACTGGTGCGATAAGCTCACTGACGATGGATTGGCGCATTTGAGGTCCTTAGTAAATTTACAGCATCTGAAT
CTGCACTGTTGCAATAAGCTCACTGACGCTGGATTGGCGCATTTGAGGCCCTTAGTCAATTTACAGCATTTAAATCTGAG
CAAGTGCCCTAAGCTCACTGATGCTGGATTGGCGCATTTGACACCTTTAGTCAATTTACAGCATTTAGATCTAAGTTGGT
GCCCACTGAATTTCACCGGCGCTGGATTAGCGTATTTGGCTCCCTTAATAGATCTACAGTATTTAAATTTATGTTGCTGC
AATGAGCTCACTGACATTGGATTAATGCATTTGACACCCTTAGTCAATTTACAGCATTTAGATCTGAGTGGATGCGATAA
TCTCACTGACGCTGGATTAATGCATTTGACATCCTTAGTAAATTTACAGCATCTGAATCTGCGTTGTTGCGATAATCTCA
CTAAAACTGGATTAATGCATTTGACTTCCTTAGTAAATTTACGGCAGTTAGTTCTGAGTTGGTACTCGCCCGATCTCAAT
GAAGCTGGATTAGCGCATTTAATTCCCCACTTTGAGGCTTCACAGCCTTGGGACGACCTTTATCATTACAGACATCTTCT
TCAAGCTAAATTAGCATATACTAGCTTTTTACGTAGAGGACAGTGGGGTTTGCCTACATTGATAAGAAAACACTCGATGC
CTCTGAATTAG

Upstream 100 bases:

>100_bases
TCTCTTTTTAACTTTAATTACATATATAATTTCATTAATATTGCAATATTTTTTATATATAATATAATTAAAAATTATCC
AAATAATTTGGAGGGTAATT

Downstream 100 bases:

>100_bases
CGCATTTTAAATTCCTAGTAGATAAATCACATTTAGGTTTGTGTTGGCACAAAAACTCTTAATGATGCAGAATACAGAAG
TATTATTCCCTCAGAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MHIHNPSFNRQTLIANADTHLYYRSNDHLRFSERINLLCKTIFQNFLNLFFNYINRDQLQSQWREIFWGRKEIATTRPES
SVSLSSSTQTSVFVLPSSEKARTQETIDNSKDENKPLVNSLAGIEEIEASTIQPSNPLPFPQEEFKLSFLDKTSLNISSS
QLSLLMEKSLYFKSLWSGNFKETLRDPLTLTQKEFIHLLNCLLDANYKVPLKKICSFIQLADYYQLTEVVKNLEQRLLDA
YKSKKFELFNSSEDSLVKLKELLNFAQQYQLNTLKNYLELTVVSSLLNQASHLTEFEKIINYFANAIEGLNFSEYAYLTD
IHLLALKSWELTDARLAHLAPLVNLRHLNLSGDMSNLTDAGLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLVNLQHLN
LHCCNKLTDAGLAHLRPLVNLQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYLNLCCC
NELTDIGLMHLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLNLRCCDNLTKTGLMHLTSLVNLRQLVLSWYSPDLN
EAGLAHLIPHFEASQPWDDLYHYRHLLQAKLAYTSFLRRGQWGLPTLIRKHSMPLN

Sequences:

>Translated_616_residues
MHIHNPSFNRQTLIANADTHLYYRSNDHLRFSERINLLCKTIFQNFLNLFFNYINRDQLQSQWREIFWGRKEIATTRPES
SVSLSSSTQTSVFVLPSSEKARTQETIDNSKDENKPLVNSLAGIEEIEASTIQPSNPLPFPQEEFKLSFLDKTSLNISSS
QLSLLMEKSLYFKSLWSGNFKETLRDPLTLTQKEFIHLLNCLLDANYKVPLKKICSFIQLADYYQLTEVVKNLEQRLLDA
YKSKKFELFNSSEDSLVKLKELLNFAQQYQLNTLKNYLELTVVSSLLNQASHLTEFEKIINYFANAIEGLNFSEYAYLTD
IHLLALKSWELTDARLAHLAPLVNLRHLNLSGDMSNLTDAGLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLVNLQHLN
LHCCNKLTDAGLAHLRPLVNLQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYLNLCCC
NELTDIGLMHLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLNLRCCDNLTKTGLMHLTSLVNLRQLVLSWYSPDLN
EAGLAHLIPHFEASQPWDDLYHYRHLLQAKLAYTSFLRRGQWGLPTLIRKHSMPLN
>Mature_616_residues
MHIHNPSFNRQTLIANADTHLYYRSNDHLRFSERINLLCKTIFQNFLNLFFNYINRDQLQSQWREIFWGRKEIATTRPES
SVSLSSSTQTSVFVLPSSEKARTQETIDNSKDENKPLVNSLAGIEEIEASTIQPSNPLPFPQEEFKLSFLDKTSLNISSS
QLSLLMEKSLYFKSLWSGNFKETLRDPLTLTQKEFIHLLNCLLDANYKVPLKKICSFIQLADYYQLTEVVKNLEQRLLDA
YKSKKFELFNSSEDSLVKLKELLNFAQQYQLNTLKNYLELTVVSSLLNQASHLTEFEKIINYFANAIEGLNFSEYAYLTD
IHLLALKSWELTDARLAHLAPLVNLRHLNLSGDMSNLTDAGLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLVNLQHLN
LHCCNKLTDAGLAHLRPLVNLQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYLNLCCC
NELTDIGLMHLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLNLRCCDNLTKTGLMHLTSLVNLRQLVLSWYSPDLN
EAGLAHLIPHFEASQPWDDLYHYRHLLQAKLAYTSFLRRGQWGLPTLIRKHSMPLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=209, Percent_Identity=35.4066985645933, Blast_Score=105, Evalue=2e-22,
Organism=Homo sapiens, GI284447308, Length=348, Percent_Identity=29.0229885057471, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI6912466, Length=209, Percent_Identity=32.0574162679426, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI296531375, Length=330, Percent_Identity=28.7878787878788, Blast_Score=75, Evalue=3e-13,
Organism=Homo sapiens, GI161333854, Length=264, Percent_Identity=28.4090909090909, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI284447314, Length=220, Percent_Identity=33.1818181818182, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI161333852, Length=262, Percent_Identity=28.2442748091603, Blast_Score=71, Evalue=4e-12,
Organism=Homo sapiens, GI289666746, Length=314, Percent_Identity=30.2547770700637, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI27734755, Length=400, Percent_Identity=27, Blast_Score=67, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6322549, Length=211, Percent_Identity=31.7535545023697, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI17647819, Length=218, Percent_Identity=33.9449541284404, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24662818, Length=184, Percent_Identity=37.5, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357913, Length=260, Percent_Identity=30.7692307692308, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70397; Mature: 70397

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIHNPSFNRQTLIANADTHLYYRSNDHLRFSERINLLCKTIFQNFLNLFFNYINRDQLQ
CCCCCCCCCCCEEEEECCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
SQWREIFWGRKEIATTRPESSVSLSSSTQTSVFVLPSSEKARTQETIDNSKDENKPLVNS
HHHHHHHCCCHHHHCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCHHHHH
LAGIEEIEASTIQPSNPLPFPQEEFKLSFLDKTSLNISSSQLSLLMEKSLYFKSLWSGNF
HHHHHHHHHCCCCCCCCCCCCHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
KETLRDPLTLTQKEFIHLLNCLLDANYKVPLKKICSFIQLADYYQLTEVVKNLEQRLLDA
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKSKKFELFNSSEDSLVKLKELLNFAQQYQLNTLKNYLELTVVSSLLNQASHLTEFEKII
HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYFANAIEGLNFSEYAYLTDIHLLALKSWELTDARLAHLAPLVNLRHLNLSGDMSNLTDA
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHH
GLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLVNLQHLNLHCCNKLTDAGLAHLRPLVN
HHHHHHHHCCEEECCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYLNLCCC
HCCCCHHHCCCCHHCCHHHHHHHCCEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH
NELTDIGLMHLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLNLRCCDNLTKTGLMH
HHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LTSLVNLRQLVLSWYSPDLNEAGLAHLIPHFEASQPWDDLYHYRHLLQAKLAYTSFLRRG
HHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
QWGLPTLIRKHSMPLN
CCCCHHHHHHCCCCCC
>Mature Secondary Structure
MHIHNPSFNRQTLIANADTHLYYRSNDHLRFSERINLLCKTIFQNFLNLFFNYINRDQLQ
CCCCCCCCCCCEEEEECCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
SQWREIFWGRKEIATTRPESSVSLSSSTQTSVFVLPSSEKARTQETIDNSKDENKPLVNS
HHHHHHHCCCHHHHCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCHHHHH
LAGIEEIEASTIQPSNPLPFPQEEFKLSFLDKTSLNISSSQLSLLMEKSLYFKSLWSGNF
HHHHHHHHHCCCCCCCCCCCCHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
KETLRDPLTLTQKEFIHLLNCLLDANYKVPLKKICSFIQLADYYQLTEVVKNLEQRLLDA
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKSKKFELFNSSEDSLVKLKELLNFAQQYQLNTLKNYLELTVVSSLLNQASHLTEFEKII
HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYFANAIEGLNFSEYAYLTDIHLLALKSWELTDARLAHLAPLVNLRHLNLSGDMSNLTDA
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHH
GLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLVNLQHLNLHCCNKLTDAGLAHLRPLVN
HHHHHHHHCCEEECCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYLNLCCC
HCCCCHHHCCCCHHCCHHHHHHHCCEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH
NELTDIGLMHLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLNLRCCDNLTKTGLMH
HHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LTSLVNLRQLVLSWYSPDLNEAGLAHLIPHFEASQPWDDLYHYRHLLQAKLAYTSFLRRG
HHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
QWGLPTLIRKHSMPLN
CCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA