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The map label for this gene is ytgA

Identifier: 46445890

GI number: 46445890

Start: 361676

End: 362686

Strand: Direct

Name: ytgA

Synonym: pc0256

Alternate gene names: NA

Gene position: 361676-362686 (Clockwise)

Preceding gene: 46445889

Following gene: 46445891

Centisome position: 14.98

GC content: 35.61

Gene sequence:

>1011_bases
ATGAGACAGTATCTTCTTGTTGTTTTAAGTTTCGTGGGACTATTAGCATTAATAAGCTGTTCTAAAGTTACACATTCTAA
AAGGCACGCTGAATTCCAACAATGGATCCATGCAAATGATAAAATCAAAGTTTTAAGCACAACAGCGATGATTAATGATT
TGGTACAAAAAGTCGGTGGTGATCGAGTTGACACATTCACTCTCATTCAAGGAGAATTAGATCCTCATTCTTACCAATTA
GTAAAAGGAGATGATGAAAAATTAATGTTTGCTCATCTGATTTTCTATAATGGGCTTGGTTTGGAGCACGGACCTAGTTT
GCATTATCATTTAGTTGAAAATCCTAAAGCTTATGCTCTTGGAGACTGGGTTGAGAAGCAAGATCCTTTAGCTATTATTT
ATGTCAATGGACAAAAAGATCCCCATCTATGGATGGATATTTCTTTATGGTTGAAAACAATTCCTTTAATTGTTGAAAGA
TTGAGCGAGCAAGATCCTTTACATGCCGACCTATTTCGTAAAAACGCCAATGAATTTCAAAAAGAAATGTTGAAAGTTCA
TGAAGAAGTGAAAGAAATGATAGGGCAGATTCCAGCTGAAAAACGCTTCATGGTTACGAGCCATGATGCATTTAATTATT
TTACTAGAGCTTATTTAGCTGAAGGTAATGAAAGAGAAACAGGGGAGTGGAGTAAAAGATTTGCTGCCCCTGAAGGGCTT
GCTCCTGAAAGTCAGCTAAGTGTCACAGATATTAAAATGATTATTAATTACCTGAAAAAGAATCATATTTCTGTTGTTTT
TCCAGAATCTAATGTGAGTCGGGATTCTATTCGAAAAATTGTTCAAGCTGGCCAGGAAGAAGGGCTTCGTGTGGAAATGG
CTTGCTGTCCTTTATACGGAGACGCTATGGGGAAACCAGGTTCAGATGGAGATAGTTATTTAAAAATGATTAAGTATAAT
GCTAAAATATTAACCAGGTATATGAATGAAAATATTTCATTCGATAAGTGA

Upstream 100 bases:

>100_bases
CAATTCGCAATGTGGGTCGCTATGCATTACAAATTCACTTCAATACAGGATGTTCCATGGGAATTTATAGTTTTGAAATG
CTTCGGCAAATGGAGAAAGA

Downstream 100 bases:

>100_bases
TGGAATGAATAAAACTTTACCAAACCCAGTTTCTGTTTTACCAGCCTTACAAGTTACTCAAATGTCAGTTAATTATGGTA
AAACATCAGCTTTATGGGAT

Product: putative ABC transporter periplasmic substrate-binding protein ytgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MRQYLLVVLSFVGLLALISCSKVTHSKRHAEFQQWIHANDKIKVLSTTAMINDLVQKVGGDRVDTFTLIQGELDPHSYQL
VKGDDEKLMFAHLIFYNGLGLEHGPSLHYHLVENPKAYALGDWVEKQDPLAIIYVNGQKDPHLWMDISLWLKTIPLIVER
LSEQDPLHADLFRKNANEFQKEMLKVHEEVKEMIGQIPAEKRFMVTSHDAFNYFTRAYLAEGNERETGEWSKRFAAPEGL
APESQLSVTDIKMIINYLKKNHISVVFPESNVSRDSIRKIVQAGQEEGLRVEMACCPLYGDAMGKPGSDGDSYLKMIKYN
AKILTRYMNENISFDK

Sequences:

>Translated_336_residues
MRQYLLVVLSFVGLLALISCSKVTHSKRHAEFQQWIHANDKIKVLSTTAMINDLVQKVGGDRVDTFTLIQGELDPHSYQL
VKGDDEKLMFAHLIFYNGLGLEHGPSLHYHLVENPKAYALGDWVEKQDPLAIIYVNGQKDPHLWMDISLWLKTIPLIVER
LSEQDPLHADLFRKNANEFQKEMLKVHEEVKEMIGQIPAEKRFMVTSHDAFNYFTRAYLAEGNERETGEWSKRFAAPEGL
APESQLSVTDIKMIINYLKKNHISVVFPESNVSRDSIRKIVQAGQEEGLRVEMACCPLYGDAMGKPGSDGDSYLKMIKYN
AKILTRYMNENISFDK
>Mature_336_residues
MRQYLLVVLSFVGLLALISCSKVTHSKRHAEFQQWIHANDKIKVLSTTAMINDLVQKVGGDRVDTFTLIQGELDPHSYQL
VKGDDEKLMFAHLIFYNGLGLEHGPSLHYHLVENPKAYALGDWVEKQDPLAIIYVNGQKDPHLWMDISLWLKTIPLIVER
LSEQDPLHADLFRKNANEFQKEMLKVHEEVKEMIGQIPAEKRFMVTSHDAFNYFTRAYLAEGNERETGEWSKRFAAPEGL
APESQLSVTDIKMIINYLKKNHISVVFPESNVSRDSIRKIVQAGQEEGLRVEMACCPLYGDAMGKPGSDGDSYLKMIKYN
AKILTRYMNENISFDK

Specific function: Part of an ATP-driven transport system CT_067/CT_068/CT_069/CT_070 for a metal. Metal-binding component [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 38430; Mature: 38430

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQYLLVVLSFVGLLALISCSKVTHSKRHAEFQQWIHANDKIKVLSTTAMINDLVQKVGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCC
DRVDTFTLIQGELDPHSYQLVKGDDEKLMFAHLIFYNGLGLEHGPSLHYHLVENPKAYAL
CCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEC
GDWVEKQDPLAIIYVNGQKDPHLWMDISLWLKTIPLIVERLSEQDPLHADLFRKNANEFQ
CCHHCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHH
KEMLKVHEEVKEMIGQIPAEKRFMVTSHDAFNYFTRAYLAEGNERETGEWSKRFAAPEGL
HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC
APESQLSVTDIKMIINYLKKNHISVVFPESNVSRDSIRKIVQAGQEEGLRVEMACCPLYG
CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC
DAMGKPGSDGDSYLKMIKYNAKILTRYMNENISFDK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRQYLLVVLSFVGLLALISCSKVTHSKRHAEFQQWIHANDKIKVLSTTAMINDLVQKVGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCC
DRVDTFTLIQGELDPHSYQLVKGDDEKLMFAHLIFYNGLGLEHGPSLHYHLVENPKAYAL
CCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEC
GDWVEKQDPLAIIYVNGQKDPHLWMDISLWLKTIPLIVERLSEQDPLHADLFRKNANEFQ
CCHHCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHH
KEMLKVHEEVKEMIGQIPAEKRFMVTSHDAFNYFTRAYLAEGNERETGEWSKRFAAPEGL
HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC
APESQLSVTDIKMIINYLKKNHISVVFPESNVSRDSIRKIVQAGQEEGLRVEMACCPLYG
CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC
DAMGKPGSDGDSYLKMIKYNAKILTRYMNENISFDK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10463174; 9784136 [H]