| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is ntt_1 [H]
Identifier: 46445884
GI number: 46445884
Start: 351721
End: 353262
Strand: Direct
Name: ntt_1 [H]
Synonym: pc0250
Alternate gene names: 46445884
Gene position: 351721-353262 (Clockwise)
Preceding gene: 46445881
Following gene: 46445885
Centisome position: 14.57
GC content: 36.51
Gene sequence:
>1542_bases ATGTCGCAAGATGCGAAACAAGACTTTGGTAAGTGGAGGGCATTCTTTTGGCCTGTACACGGTTATGAACTTAAAAAACT TCTTCCAATGTTTTTTATGTTCTTTTTTATTTCTTTCAATTACACAATTTTAAGAGATACAAAAGACACTTTAATCGTGA CCTCTGCAGGTGCGGAAGCCATTCCATTTTTGAAGTCTTTTGGTGTTGTCCCTGCAGCTATCCTTTTTATGATCATTTAT GCCAAGCTTAGCAATACGCTAAGCAGAGAAAATTTATTTTACGTTACGCTTTTACCTTTTATCATTTTCTTCGGCTTATT TGCTTTTGTCATGTATCCAGCTAGAGAAGTTTTAATGCCTCATGCTTCTGCTGAAGCTTTAAAAGCTTATTTACCTGGCG GTTGGACCGGGCTTGCGGCGGCATATGAAAACTGGATGTATTCGATTTTTTACATTTTAGCTGAACTTTGGGGAAGCGTT GTATTATCTCTTCTTTTTTGGGGATTTGCTAACCAAATTACCCGTGTAAATGAAGCTAAACGTTTTTATAGCCTTTTCGG TTTGGGTGCTAATTTGGCACTTTTAGTTTCAGGTCCTGCTATTGTATATGTATCAGATATTCGCAAGCATTTACCTGCAA ATGTTGATGCATGGCAAATTTCTTTAAATTATTTAATGGGTATGGTCGTCATTGCCGGATTAGCAATTTTAGCTATCTAT TGGTGGATTAATCGTGCAGTTTTAACAGATCCACGTTTTTATGATTTAAATCAAGAAAAAGCTCCTGGTAAAAAGAAAAA AGCTAAAATGTCTCTTGGAGAAAGCTTCAAATTCCTCTTTACCTCTAAGTATATCCTTTGTTTGGCGATATTGGTTATTG CTTACGGTATTTCTATTAACTTAGTAGAAATTACATGGAAGAGCCAGGTGAAACTTCAATATCCTAATCCAAATGATTAC AGCACGTTCATGGGATGGTTCTCAACAATGACGGGTGCCGTCACAATTTTGATGATGTTATTCGTTGGTGGTAACGTAAT TCGTCATAAAGGTTGGGGATTTGCAGCTTTAATTACTCCAGTTGTTTTATTAGTCACCGGGATTGCTTTTTTCTCATTCG TGATTTTTAAAGATCACCTAGCTGGATATATTGCTGCCTTAGGAACTACTCCACTATTCTTAGCTGTCATCTTTGGTGCG GCTCAAAATATTATGAGCAAATCTGCTAAATACTCTTTATTTGATCCAACAAAAGAAATGGCTTATATTCCTTTAGATGA TGAATCTAAAGTAAAAGGTAAAGCCGCAGTTGACGTAGTAGGAGCTCGTTTAGGAAAATCTGGCGGATCTATTATTCAAA TGGGATTACTTGCATTTGGAACGTTAGCAACTATTACACCTTATATTGGCGCGATTTTGATGGTTATTATTGCTGCCTGG ATTGTGGCTGCCCGTTCATTAAGCAAACAATTTACTCAATTGACTGCTGAGCAGAATATTGAGAAAAATATTGATAAAAC ATCGGAAATAGCTACTAGCTAA
Upstream 100 bases:
>100_bases ATAATCCTGAATACATTAGTAATGTTTTTACACAAAATTATGAAAACTCACAATTTATTATCAAAAATTTGCAAACAATA AACTAGTTCGAGGTTTTACT
Downstream 100 bases:
>100_bases ATTTGATGTCTTAAAAATATGCTTGTTCATACCCTCCTTTATAAAAAAGGAGGGTTTTTTATTTTCTATTTTAAATTCAG AGAATGTAAGAAATTTTTAA
Product: ADP/ATP translocase
Products: NA
Alternate protein names: ADP/ATP translocase 1 [H]
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MSQDAKQDFGKWRAFFWPVHGYELKKLLPMFFMFFFISFNYTILRDTKDTLIVTSAGAEAIPFLKSFGVVPAAILFMIIY AKLSNTLSRENLFYVTLLPFIIFFGLFAFVMYPAREVLMPHASAEALKAYLPGGWTGLAAAYENWMYSIFYILAELWGSV VLSLLFWGFANQITRVNEAKRFYSLFGLGANLALLVSGPAIVYVSDIRKHLPANVDAWQISLNYLMGMVVIAGLAILAIY WWINRAVLTDPRFYDLNQEKAPGKKKKAKMSLGESFKFLFTSKYILCLAILVIAYGISINLVEITWKSQVKLQYPNPNDY STFMGWFSTMTGAVTILMMLFVGGNVIRHKGWGFAALITPVVLLVTGIAFFSFVIFKDHLAGYIAALGTTPLFLAVIFGA AQNIMSKSAKYSLFDPTKEMAYIPLDDESKVKGKAAVDVVGARLGKSGGSIIQMGLLAFGTLATITPYIGAILMVIIAAW IVAARSLSKQFTQLTAEQNIEKNIDKTSEIATS
Sequences:
>Translated_513_residues MSQDAKQDFGKWRAFFWPVHGYELKKLLPMFFMFFFISFNYTILRDTKDTLIVTSAGAEAIPFLKSFGVVPAAILFMIIY AKLSNTLSRENLFYVTLLPFIIFFGLFAFVMYPAREVLMPHASAEALKAYLPGGWTGLAAAYENWMYSIFYILAELWGSV VLSLLFWGFANQITRVNEAKRFYSLFGLGANLALLVSGPAIVYVSDIRKHLPANVDAWQISLNYLMGMVVIAGLAILAIY WWINRAVLTDPRFYDLNQEKAPGKKKKAKMSLGESFKFLFTSKYILCLAILVIAYGISINLVEITWKSQVKLQYPNPNDY STFMGWFSTMTGAVTILMMLFVGGNVIRHKGWGFAALITPVVLLVTGIAFFSFVIFKDHLAGYIAALGTTPLFLAVIFGA AQNIMSKSAKYSLFDPTKEMAYIPLDDESKVKGKAAVDVVGARLGKSGGSIIQMGLLAFGTLATITPYIGAILMVIIAAW IVAARSLSKQFTQLTAEQNIEKNIDKTSEIATS >Mature_512_residues SQDAKQDFGKWRAFFWPVHGYELKKLLPMFFMFFFISFNYTILRDTKDTLIVTSAGAEAIPFLKSFGVVPAAILFMIIYA KLSNTLSRENLFYVTLLPFIIFFGLFAFVMYPAREVLMPHASAEALKAYLPGGWTGLAAAYENWMYSIFYILAELWGSVV LSLLFWGFANQITRVNEAKRFYSLFGLGANLALLVSGPAIVYVSDIRKHLPANVDAWQISLNYLMGMVVIAGLAILAIYW WINRAVLTDPRFYDLNQEKAPGKKKKAKMSLGESFKFLFTSKYILCLAILVIAYGISINLVEITWKSQVKLQYPNPNDYS TFMGWFSTMTGAVTILMMLFVGGNVIRHKGWGFAALITPVVLLVTGIAFFSFVIFKDHLAGYIAALGTTPLFLAVIFGAA QNIMSKSAKYSLFDPTKEMAYIPLDDESKVKGKAAVDVVGARLGKSGGSIIQMGLLAFGTLATITPYIGAILMVIIAAWI VAARSLSKQFTQLTAEQNIEKNIDKTSEIATS
Specific function: Unknown
COG id: COG3202
COG function: function code C; ATP/ADP translocase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP/ATP translocase tlc family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004667 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57032; Mature: 56901
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDAKQDFGKWRAFFWPVHGYELKKLLPMFFMFFFISFNYTILRDTKDTLIVTSAGAEA CCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCHH IPFLKSFGVVPAAILFMIIYAKLSNTLSRENLFYVTLLPFIIFFGLFAFVMYPAREVLMP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC HASAEALKAYLPGGWTGLAAAYENWMYSIFYILAELWGSVVLSLLFWGFANQITRVNEAK CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFYSLFGLGANLALLVSGPAIVYVSDIRKHLPANVDAWQISLNYLMGMVVIAGLAILAIY HHHHHHCCCCCEEEEEECCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WWINRAVLTDPRFYDLNQEKAPGKKKKAKMSLGESFKFLFTSKYILCLAILVIAYGISIN HHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEE LVEITWKSQVKLQYPNPNDYSTFMGWFSTMTGAVTILMMLFVGGNVIRHKGWGFAALITP EEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH VVLLVTGIAFFSFVIFKDHLAGYIAALGTTPLFLAVIFGAAQNIMSKSAKYSLFDPTKEM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHC AYIPLDDESKVKGKAAVDVVGARLGKSGGSIIQMGLLAFGTLATITPYIGAILMVIIAAW EEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAARSLSKQFTQLTAEQNIEKNIDKTSEIATS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure SQDAKQDFGKWRAFFWPVHGYELKKLLPMFFMFFFISFNYTILRDTKDTLIVTSAGAEA CCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCHH IPFLKSFGVVPAAILFMIIYAKLSNTLSRENLFYVTLLPFIIFFGLFAFVMYPAREVLMP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC HASAEALKAYLPGGWTGLAAAYENWMYSIFYILAELWGSVVLSLLFWGFANQITRVNEAK CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFYSLFGLGANLALLVSGPAIVYVSDIRKHLPANVDAWQISLNYLMGMVVIAGLAILAIY HHHHHHCCCCCEEEEEECCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WWINRAVLTDPRFYDLNQEKAPGKKKKAKMSLGESFKFLFTSKYILCLAILVIAYGISIN HHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEE LVEITWKSQVKLQYPNPNDYSTFMGWFSTMTGAVTILMMLFVGGNVIRHKGWGFAALITP EEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH VVLLVTGIAFFSFVIFKDHLAGYIAALGTTPLFLAVIFGAAQNIMSKSAKYSLFDPTKEM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHC AYIPLDDESKVKGKAAVDVVGARLGKSGGSIIQMGLLAFGTLATITPYIGAILMVIIAAW EEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAARSLSKQFTQLTAEQNIEKNIDKTSEIATS HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]