| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445849
Identifier: 46445849
GI number: 46445849
Start: 310067
End: 310249
Strand: Reverse
Name: 46445849
Synonym: pc0215
Alternate gene names: NA
Gene position: 310249-310067 (Counterclockwise)
Preceding gene: 46445850
Following gene: 46445846
Centisome position: 12.85
GC content: 38.25
Gene sequence:
>183_bases ATGAGTGAAATAAAGAAGAATGGCCAGAACTGGAATCGAACCAGCGACACAAGGATTTTCAGTCCTCTGCTCTACCGACT GAGCTATCTGGCCAAACTTAAAGAAAGTACTTTATTGAATGGTTGTTTTTTGTGCAACGTTTTTATACAAGTTTCTTTTC TTACCTTTTATCAAGCCTCCTGA
Upstream 100 bases:
>100_bases ATTCAACGGAATTTGCATTTTTAACAGTCAGACTCAAATTTTCTTATTTTTCATTCATTATGGCAGCCATAATATAAGTA TAAAAGTCGAGAGTTGACTA
Downstream 100 bases:
>100_bases ATCTGTATCAGGAGGCTTGACACCTCTATTTTTTCTTTTCAATAGAATAGAGAACAATCATATCTTTAATTACGTTGACA GCTTCTTGCATTTGCAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MSEIKKNGQNWNRTSDTRIFSPLLYRLSYLAKLKESTLLNGCFLCNVFIQVSFLTFYQAS
Sequences:
>Translated_60_residues MSEIKKNGQNWNRTSDTRIFSPLLYRLSYLAKLKESTLLNGCFLCNVFIQVSFLTFYQAS >Mature_59_residues SEIKKNGQNWNRTSDTRIFSPLLYRLSYLAKLKESTLLNGCFLCNVFIQVSFLTFYQAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7000; Mature: 6869
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIKKNGQNWNRTSDTRIFSPLLYRLSYLAKLKESTLLNGCFLCNVFIQVSFLTFYQAS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEIKKNGQNWNRTSDTRIFSPLLYRLSYLAKLKESTLLNGCFLCNVFIQVSFLTFYQAS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA