Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is wza [H]

Identifier: 46445820

GI number: 46445820

Start: 277152

End: 278201

Strand: Direct

Name: wza [H]

Synonym: pc0186

Alternate gene names: 46445820

Gene position: 277152-278201 (Clockwise)

Preceding gene: 46445818

Following gene: 46445821

Centisome position: 11.48

GC content: 37.71

Gene sequence:

>1050_bases
ATGATGAAATATCTTGCATTTTGCCTCCTCTCCCTCCTTTTTTTTCTCAGCTCTTGTAGTACACCTTGTCATAATTATGA
CGTGTTTGGTGCAGATGAATTTGTGATTGATTCTTATAAAATTCGCCAGGGGAAGTTGGCAATTTTGGATATGGAAGGAT
CAGACGTTAAGGAATTAGATTGCGATGCAATGGAAGAATATCAAGATGTCATTTCTGAAGATGATATTTTGAATATTGCG
ATCTATCATCCGAAACGACGCGATGTGATGGATGCTATTCAATTTATTAATGCAACAATAGGCTTTCGTGTTAGTGAAGG
CAGGGTCGATTTTCCAGATATCCCATCCGTTGAAGTAGCAGGTTTATCGCTTGAAGAGGCTAGACAGAAAATACAGCTTT
GCTATCAAGAACAAATTCAAGACGTTGAAGTTTTCTTGAATTATCGAAATAGACTTTCCAGAAAAGTTGAACTCACAGGA
GCTGTAGCCACTCCTGTCATTGCTGTCGATGGAAAAATTCGTTTATATGAAGTTTTAGCACTAGCTAAAGTACCCAATAA
TGCCAATTTTTTTAAAAGTTATGTGGTGAGAGAAGGAAAGCAGCTTCCCATAGATATTTATAAATTGATGAATTTAGGGG
ATATGAGTCAAAATATTGTTATGCGTGGAGGAGATCGTATTTTTATTGCCGCTCCAAGTGACTCGACAGTTATGGTGATG
GGCGAAGTAGGACATCCGATGGCTGTTAATCTTCCTTATGGTTTTATGTCTTTACGACAAGCACTTGTCTCTGCTGGAGG
TATTCCTTTTACAGGTAATCGTGATTGTATCCAAGTCATTAGGGGAAATTTACAAAACCCTAAAATTTACGTTCTTTCTT
GGAATCACATTATTCATCTACCTAATGATAGTTTACTCTTGATGCCAGGAGATACGGTTTATGTATCTGAGAAACCCATT
ACGCAATGGAATAGGTTTATTGATCAGTTACTGCCAAGCTGCTTAGGGGTTCAAGCAGCTTATGGAACTTACAGGCTTTT
TAGAAATTGA

Upstream 100 bases:

>100_bases
GTTAAAGCGGTTTAGAAAGAGAAAATGCTTTTGATTTAATATAAAATAGGCTAAGAAAGATAACTCCTAAAAGTTTAAAG
TTTTAAAGTTTGTAACCTCT

Downstream 100 bases:

>100_bases
TCGCTTGGAGATGAGTAATTGTTTTTGTATATAATAAGTACTTTAAGATATGTAGATTAGGTTAGAAATGAGTAAGACAA
CAGATAAAGATGACAAACTT

Product: putative polysaccharide export protein wza

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MMKYLAFCLLSLLFFLSSCSTPCHNYDVFGADEFVIDSYKIRQGKLAILDMEGSDVKELDCDAMEEYQDVISEDDILNIA
IYHPKRRDVMDAIQFINATIGFRVSEGRVDFPDIPSVEVAGLSLEEARQKIQLCYQEQIQDVEVFLNYRNRLSRKVELTG
AVATPVIAVDGKIRLYEVLALAKVPNNANFFKSYVVREGKQLPIDIYKLMNLGDMSQNIVMRGGDRIFIAAPSDSTVMVM
GEVGHPMAVNLPYGFMSLRQALVSAGGIPFTGNRDCIQVIRGNLQNPKIYVLSWNHIIHLPNDSLLLMPGDTVYVSEKPI
TQWNRFIDQLLPSCLGVQAAYGTYRLFRN

Sequences:

>Translated_349_residues
MMKYLAFCLLSLLFFLSSCSTPCHNYDVFGADEFVIDSYKIRQGKLAILDMEGSDVKELDCDAMEEYQDVISEDDILNIA
IYHPKRRDVMDAIQFINATIGFRVSEGRVDFPDIPSVEVAGLSLEEARQKIQLCYQEQIQDVEVFLNYRNRLSRKVELTG
AVATPVIAVDGKIRLYEVLALAKVPNNANFFKSYVVREGKQLPIDIYKLMNLGDMSQNIVMRGGDRIFIAAPSDSTVMVM
GEVGHPMAVNLPYGFMSLRQALVSAGGIPFTGNRDCIQVIRGNLQNPKIYVLSWNHIIHLPNDSLLLMPGDTVYVSEKPI
TQWNRFIDQLLPSCLGVQAAYGTYRLFRN
>Mature_349_residues
MMKYLAFCLLSLLFFLSSCSTPCHNYDVFGADEFVIDSYKIRQGKLAILDMEGSDVKELDCDAMEEYQDVISEDDILNIA
IYHPKRRDVMDAIQFINATIGFRVSEGRVDFPDIPSVEVAGLSLEEARQKIQLCYQEQIQDVEVFLNYRNRLSRKVELTG
AVATPVIAVDGKIRLYEVLALAKVPNNANFFKSYVVREGKQLPIDIYKLMNLGDMSQNIVMRGGDRIFIAAPSDSTVMVM
GEVGHPMAVNLPYGFMSLRQALVSAGGIPFTGNRDCIQVIRGNLQNPKIYVLSWNHIIHLPNDSLLLMPGDTVYVSEKPI
TQWNRFIDQLLPSCLGVQAAYGTYRLFRN

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. Might be involved in the translocation of polysaccharides across the outer membrane [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1788376, Length=296, Percent_Identity=28.0405405405405, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1787218, Length=311, Percent_Identity=27.0096463022508, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 39344; Mature: 39344

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKYLAFCLLSLLFFLSSCSTPCHNYDVFGADEFVIDSYKIRQGKLAILDMEGSDVKELD
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECEEECCCCEEEEECCCCCCCCCC
CDAMEEYQDVISEDDILNIAIYHPKRRDVMDAIQFINATIGFRVSEGRVDFPDIPSVEVA
HHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEE
GLSLEEARQKIQLCYQEQIQDVEVFLNYRNRLSRKVELTGAVATPVIAVDGKIRLYEVLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCEEEECCCEEHHHHHH
LAKVPNNANFFKSYVVREGKQLPIDIYKLMNLGDMSQNIVMRGGDRIFIAAPSDSTVMVM
HHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCEEEEE
GEVGHPMAVNLPYGFMSLRQALVSAGGIPFTGNRDCIQVIRGNLQNPKIYVLSWNHIIHL
ECCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECEEEEC
PNDSLLLMPGDTVYVSEKPITQWNRFIDQLLPSCLGVQAAYGTYRLFRN
CCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MMKYLAFCLLSLLFFLSSCSTPCHNYDVFGADEFVIDSYKIRQGKLAILDMEGSDVKELD
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECEEECCCCEEEEECCCCCCCCCC
CDAMEEYQDVISEDDILNIAIYHPKRRDVMDAIQFINATIGFRVSEGRVDFPDIPSVEVA
HHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEE
GLSLEEARQKIQLCYQEQIQDVEVFLNYRNRLSRKVELTGAVATPVIAVDGKIRLYEVLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCEEEECCCEEHHHHHH
LAKVPNNANFFKSYVVREGKQLPIDIYKLMNLGDMSQNIVMRGGDRIFIAAPSDSTVMVM
HHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCEEEEE
GEVGHPMAVNLPYGFMSLRQALVSAGGIPFTGNRDCIQVIRGNLQNPKIYVLSWNHIIHL
ECCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECEEEEC
PNDSLLLMPGDTVYVSEKPITQWNRFIDQLLPSCLGVQAAYGTYRLFRN
CCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]