Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445813

Identifier: 46445813

GI number: 46445813

Start: 269784

End: 270650

Strand: Direct

Name: 46445813

Synonym: pc0179

Alternate gene names: NA

Gene position: 269784-270650 (Clockwise)

Preceding gene: 46445812

Following gene: 46445818

Centisome position: 11.17

GC content: 37.49

Gene sequence:

>867_bases
ATGAAAAGATATATTAAAGGGATACGAAGAAGGGTTAAACATTTCCAAAATAGAATAACAGATGTTTATCAAGCCCTATT
TGCAAATCAAAAATCTAGCCTTAATCGCTACTGCGATGCTTTCCCTCATCCTCAAAATGCTTTAAATATTTTCCCTGATG
ATTGGCGATCTTGTTTTCCACCCCCATTTCATGAGCTTCAAGCTGGAGAAACACCTTTATTTGATGACTTGGGAGTCAAA
TGGTGCATAAATCTTTTAGGAGGTGTTGAAAATAAAAAGGTATTAGAGTTAGGTCCTCTTGAAGGAGGGCATACGTATAT
TTTACAAAATGCAGGAGCTCAATCTATTGTTTCTATTGAAGCGCATCCTAGAGCCTATTTAAGATGTTTAATAGTTAAAG
AGGTGTTAAAATTAAATCGGGCTGAATTCCTCTTCGGAGATTTTATGCAATATTTGCGGCAATCTTCTGGCCAGTTTGAT
CTGGGTTTGGCTGTGGGCGTTCTTTATCACATGCAACAACCTGTTGAACTTCTTGCCAAAATGGCAGATAAGTGTCCGCA
GTTATATGTTTGGACTCATTATTATGAAGAAGAACATTGCAAGAAATTCTTATTAAGAAAAAGATTTGGAGCCGCGACTT
CAGCCACTTACGAAGGATTTAATTACTCAACGTATCTCTATCGATATGGTTCAGCTAGAAAATGGTCCACGTTTATTGGG
GGACCGGCTAATACAAGTCAGTGGTTAACTAGGGAAGATATACTTAATTGTTGCTACCATTTTGGCTATAACCGTATTGA
TATTAATTTTGACCAGCTGAACCATCCTCATGGACCTTGTTTTTCTTTTGTGGCTCGGAAATTCTGA

Upstream 100 bases:

>100_bases
CATTAGGATCTTTTAACATTCAAAGGCTAACAAAAGAATTATAGGCAACTATTATATTGGCTTTTATCTATAAAAGGAAA
GACTCTTACATCGAGGAATA

Downstream 100 bases:

>100_bases
AGTGGAAAAATAGTTTCGAATTTAATTTTTCGGCTCCAATGCAGGCAAGGTTGTTCAATGTAATGATAAAATATGTGAGC
AACCGCAAGACTTGGGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKRYIKGIRRRVKHFQNRITDVYQALFANQKSSLNRYCDAFPHPQNALNIFPDDWRSCFPPPFHELQAGETPLFDDLGVK
WCINLLGGVENKKVLELGPLEGGHTYILQNAGAQSIVSIEAHPRAYLRCLIVKEVLKLNRAEFLFGDFMQYLRQSSGQFD
LGLAVGVLYHMQQPVELLAKMADKCPQLYVWTHYYEEEHCKKFLLRKRFGAATSATYEGFNYSTYLYRYGSARKWSTFIG
GPANTSQWLTREDILNCCYHFGYNRIDINFDQLNHPHGPCFSFVARKF

Sequences:

>Translated_288_residues
MKRYIKGIRRRVKHFQNRITDVYQALFANQKSSLNRYCDAFPHPQNALNIFPDDWRSCFPPPFHELQAGETPLFDDLGVK
WCINLLGGVENKKVLELGPLEGGHTYILQNAGAQSIVSIEAHPRAYLRCLIVKEVLKLNRAEFLFGDFMQYLRQSSGQFD
LGLAVGVLYHMQQPVELLAKMADKCPQLYVWTHYYEEEHCKKFLLRKRFGAATSATYEGFNYSTYLYRYGSARKWSTFIG
GPANTSQWLTREDILNCCYHFGYNRIDINFDQLNHPHGPCFSFVARKF
>Mature_288_residues
MKRYIKGIRRRVKHFQNRITDVYQALFANQKSSLNRYCDAFPHPQNALNIFPDDWRSCFPPPFHELQAGETPLFDDLGVK
WCINLLGGVENKKVLELGPLEGGHTYILQNAGAQSIVSIEAHPRAYLRCLIVKEVLKLNRAEFLFGDFMQYLRQSSGQFD
LGLAVGVLYHMQQPVELLAKMADKCPQLYVWTHYYEEEHCKKFLLRKRFGAATSATYEGFNYSTYLYRYGSARKWSTFIG
GPANTSQWLTREDILNCCYHFGYNRIDINFDQLNHPHGPCFSFVARKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33462; Mature: 33462

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYIKGIRRRVKHFQNRITDVYQALFANQKSSLNRYCDAFPHPQNALNIFPDDWRSCFP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
PPFHELQAGETPLFDDLGVKWCINLLGGVENKKVLELGPLEGGHTYILQNAGAQSIVSIE
CCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCEEEEC
AHPRAYLRCLIVKEVLKLNRAEFLFGDFMQYLRQSSGQFDLGLAVGVLYHMQQPVELLAK
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
MADKCPQLYVWTHYYEEEHCKKFLLRKRFGAATSATYEGFNYSTYLYRYGSARKWSTFIG
HHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEECCCCCCCHHHCC
GPANTSQWLTREDILNCCYHFGYNRIDINFDQLNHPHGPCFSFVARKF
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKRYIKGIRRRVKHFQNRITDVYQALFANQKSSLNRYCDAFPHPQNALNIFPDDWRSCFP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
PPFHELQAGETPLFDDLGVKWCINLLGGVENKKVLELGPLEGGHTYILQNAGAQSIVSIE
CCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCEEEEC
AHPRAYLRCLIVKEVLKLNRAEFLFGDFMQYLRQSSGQFDLGLAVGVLYHMQQPVELLAK
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
MADKCPQLYVWTHYYEEEHCKKFLLRKRFGAATSATYEGFNYSTYLYRYGSARKWSTFIG
HHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEECCCCCCCHHHCC
GPANTSQWLTREDILNCCYHFGYNRIDINFDQLNHPHGPCFSFVARKF
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA