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The map label for this gene is nifU [C]

Identifier: 46445797

GI number: 46445797

Start: 242350

End: 243141

Strand: Direct

Name: nifU [C]

Synonym: pc0163

Alternate gene names: 46445797

Gene position: 242350-243141 (Clockwise)

Preceding gene: 46445796

Following gene: 46445800

Centisome position: 10.04

GC content: 37.37

Gene sequence:

>792_bases
ATGACTTTGCAAACACTCACTCAAAGTTTTCCGTGGACACGTTATAGCAAAAAGTTACTAGCTAAAATTGATAAACCACG
ATGTATGGGTTTTTTTAATAAAGAACAATCAGAAGAAAGAGCGATGCGTTTAATTGAAGGGCGGGAAGGAAAATTAGCAG
ATGGTAATTCTGTTATTTTATATTGGCTTGTCGACCCCGATGATGGCATTATTGTTGATGCTAAATTTCAAGCTTATGGA
CAATCGGCACTTATCGGAGCTGCTGAAGTTGCATGTGAACTTGTGATCGGTAAAAATTATGATCAAGCTAAGCGAATTAG
TGTAGATCTCCTCGATAAACAAGTAAGAGATAAACCCGATGAAGCAGCTTTTCCTAAAGAGGCATCACCACATTTAAATA
TTATTTTAGGGGCGATGGAAAATGCGGCAGAAAAATGTTTAGACATTCCTCTTGCTTCTAGCTATGTGGCTTCTCCGACT
CCTTTGGATATTGGAGAAGTTTTAGAAGGGGGGTATCCTGGATGGATTGAGCTTTCTTTAAAACAGAAAATTAATTTGAT
TGAAGAAGTATTAGATCGAGATGTACGACCTTATATTGAGTTAGATGCTGGAGGAGTAGTAGTTTTAGATTTAGTCAATG
ATTGGGAACTTCATATTGCGTATCAAGGTTCTTGCACTTCTTGTTTTTCGGCGACAGGAACAACATTATCTTATATTCAA
CAGATAATAAGGGCTAAGCTACATGCAAGCCTTATGGTAATACCAGACTTATCCACTTTTCATCACCATTAG

Upstream 100 bases:

>100_bases
GAGGAAGAAATTGATCGAGCTATTGAATTGGTTGTTGAAAGTGCTTGGCAGTTGAATCGAACTTCTTATAAATTATTTGA
GACAGAGAGAAAAATTTAAT

Downstream 100 bases:

>100_bases
TAGAATTTGCGATGGATTTTCGTAAATTCTACTTCATTCAATCCTAATTGAATTTATCTCGAAGTTTGGGTATTTGTAGA
AAAAGAATTTTGAAGAATAC

Product: putative iron-sulfur cluster assembly protein nifU

Products: NA

Alternate protein names: NifU-Related Protein; Nitrogen Fixation Protein NifU; Nitrogen-Fixing NifU Domain Protein; NifU Family Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; NifU Protein Homolog; Iron-Sulfur Cluster Assembly Protein NifU; Nitrogen Fixation Related Protein NifU; NifU Protein; Nifu-Like Protein; Acetolactate Synthase Small Subunit; NIFU-Like Protein

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTLQTLTQSFPWTRYSKKLLAKIDKPRCMGFFNKEQSEERAMRLIEGREGKLADGNSVILYWLVDPDDGIIVDAKFQAYG
QSALIGAAEVACELVIGKNYDQAKRISVDLLDKQVRDKPDEAAFPKEASPHLNIILGAMENAAEKCLDIPLASSYVASPT
PLDIGEVLEGGYPGWIELSLKQKINLIEEVLDRDVRPYIELDAGGVVVLDLVNDWELHIAYQGSCTSCFSATGTTLSYIQ
QIIRAKLHASLMVIPDLSTFHHH

Sequences:

>Translated_263_residues
MTLQTLTQSFPWTRYSKKLLAKIDKPRCMGFFNKEQSEERAMRLIEGREGKLADGNSVILYWLVDPDDGIIVDAKFQAYG
QSALIGAAEVACELVIGKNYDQAKRISVDLLDKQVRDKPDEAAFPKEASPHLNIILGAMENAAEKCLDIPLASSYVASPT
PLDIGEVLEGGYPGWIELSLKQKINLIEEVLDRDVRPYIELDAGGVVVLDLVNDWELHIAYQGSCTSCFSATGTTLSYIQ
QIIRAKLHASLMVIPDLSTFHHH
>Mature_262_residues
TLQTLTQSFPWTRYSKKLLAKIDKPRCMGFFNKEQSEERAMRLIEGREGKLADGNSVILYWLVDPDDGIIVDAKFQAYGQ
SALIGAAEVACELVIGKNYDQAKRISVDLLDKQVRDKPDEAAFPKEASPHLNIILGAMENAAEKCLDIPLASSYVASPTP
LDIGEVLEGGYPGWIELSLKQKINLIEEVLDRDVRPYIELDAGGVVVLDLVNDWELHIAYQGSCTSCFSATGTTLSYIQQ
IIRAKLHASLMVIPDLSTFHHH

Specific function: May Be Involved In The Formation Or Repair Of [Fe-S] Clusters Present In Iron-Sulfur Proteins (Potential). [C]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29207; Mature: 29076

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQTLTQSFPWTRYSKKLLAKIDKPRCMGFFNKEQSEERAMRLIEGREGKLADGNSVIL
CCHHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEE
YWLVDPDDGIIVDAKFQAYGQSALIGAAEVACELVIGKNYDQAKRISVDLLDKQVRDKPD
EEEECCCCCEEEEEEHHHCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCC
EAAFPKEASPHLNIILGAMENAAEKCLDIPLASSYVASPTPLDIGEVLEGGYPGWIELSL
CCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEH
KQKINLIEEVLDRDVRPYIELDAGGVVVLDLVNDWELHIAYQGSCTSCFSATGTTLSYIQ
HHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCEEEEEEECCCCCHHHHCCCHHHHHHH
QIIRAKLHASLMVIPDLSTFHHH
HHHHHHHHCEEEEECCCHHHCCC
>Mature Secondary Structure 
TLQTLTQSFPWTRYSKKLLAKIDKPRCMGFFNKEQSEERAMRLIEGREGKLADGNSVIL
CHHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEE
YWLVDPDDGIIVDAKFQAYGQSALIGAAEVACELVIGKNYDQAKRISVDLLDKQVRDKPD
EEEECCCCCEEEEEEHHHCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCC
EAAFPKEASPHLNIILGAMENAAEKCLDIPLASSYVASPTPLDIGEVLEGGYPGWIELSL
CCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEH
KQKINLIEEVLDRDVRPYIELDAGGVVVLDLVNDWELHIAYQGSCTSCFSATGTTLSYIQ
HHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCEEEEEEECCCCCHHHHCCCHHHHHHH
QIIRAKLHASLMVIPDLSTFHHH
HHHHHHHHCEEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA