| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is pgmA
Identifier: 46445795
GI number: 46445795
Start: 240480
End: 241160
Strand: Direct
Name: pgmA
Synonym: pc0161
Alternate gene names: 46445795
Gene position: 240480-241160 (Clockwise)
Preceding gene: 46445791
Following gene: 46445796
Centisome position: 9.96
GC content: 38.33
Gene sequence:
>681_bases ATGGTTAAATTAATTTTGATGCGTCACGGCCAATCTCAGTGGAATTTAGCAAATTTGTTTACTGGTTGGGTAGACATTCC CCTGTCTTTTAAAGGAATTGAAGAGGCTATAGAGGCAGGAAAACAAATCAAAAATTACCCTATTGATTTAATTTTTACTT CTTCCTTAATTCGTGCTCAAATGACAGCAATGTTGGCAATGTCTGTTCATACATCTGGTAAAGTCCCTGTGATTCTTCAC ACAGGTGAGGGGCGACTAGAAGAATGGGCAAGTATTTATAGTTCCGAATCTCAATCTCAGACAATACCTGTCATTCGTGC TTGGGAATTGAATGAGCGGATGTATGGAGAATTACAAGGAATAAATAAAGAAGAAATGGCTAAAAAATATGGAGCTGAGC AGGTGCATATTTGGCGACGAAGTTTTGATGTTCCCCCTCCAAATGGAGAAAGTTTACAAATGACAGCAGCTCGGACCATA CCTTATTTTGAAAACACCATTGTCCCTCATTTGAAAGAGAAGAAAAATATTTTTATTGCTGCACACGGAAATTCCCTGCG TTCGATTATCATGAAATTAGATGGGCTGACAACAGATCAAGTCGTTAAGTTGGAACTGGCAACAGGGGTGCCTGTGATCT ATGATTTCAATCACGATGAATATATTAAACAACAAAAGTAG
Upstream 100 bases:
>100_bases TTCTTCCTTTTTACGAAAGAACTATTAATAATAGTTCTTAAAAAATTAAAAATCAATAAAATGGGGAAGAAAATTTCTTG ATTAGATGGAGTAAAGGTAA
Downstream 100 bases:
>100_bases AATAGCATGGTTAAATTGCCTATTTATTTAGATAACAGTACAACTAGTCGTCCATCTGATTTATCAATTAGCCAAATGAT GCCTTATTTAACAGATCGTT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MVKLILMRHGQSQWNLANLFTGWVDIPLSFKGIEEAIEAGKQIKNYPIDLIFTSSLIRAQMTAMLAMSVHTSGKVPVILH TGEGRLEEWASIYSSESQSQTIPVIRAWELNERMYGELQGINKEEMAKKYGAEQVHIWRRSFDVPPPNGESLQMTAARTI PYFENTIVPHLKEKKNIFIAAHGNSLRSIIMKLDGLTTDQVVKLELATGVPVIYDFNHDEYIKQQK
Sequences:
>Translated_226_residues MVKLILMRHGQSQWNLANLFTGWVDIPLSFKGIEEAIEAGKQIKNYPIDLIFTSSLIRAQMTAMLAMSVHTSGKVPVILH TGEGRLEEWASIYSSESQSQTIPVIRAWELNERMYGELQGINKEEMAKKYGAEQVHIWRRSFDVPPPNGESLQMTAARTI PYFENTIVPHLKEKKNIFIAAHGNSLRSIIMKLDGLTTDQVVKLELATGVPVIYDFNHDEYIKQQK >Mature_226_residues MVKLILMRHGQSQWNLANLFTGWVDIPLSFKGIEEAIEAGKQIKNYPIDLIFTSSLIRAQMTAMLAMSVHTSGKVPVILH TGEGRLEEWASIYSSESQSQTIPVIRAWELNERMYGELQGINKEEMAKKYGAEQVHIWRRSFDVPPPNGESLQMTAARTI PYFENTIVPHLKEKKNIFIAAHGNSLRSIIMKLDGLTTDQVVKLELATGVPVIYDFNHDEYIKQQK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI50593010, Length=246, Percent_Identity=37.8048780487805, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI4505753, Length=246, Percent_Identity=37.3983739837398, Blast_Score=161, Evalue=5e-40, Organism=Homo sapiens, GI4502445, Length=248, Percent_Identity=34.6774193548387, Blast_Score=150, Evalue=6e-37, Organism=Homo sapiens, GI40353764, Length=248, Percent_Identity=34.6774193548387, Blast_Score=150, Evalue=6e-37, Organism=Homo sapiens, GI71274132, Length=249, Percent_Identity=35.7429718875502, Blast_Score=147, Evalue=6e-36, Organism=Homo sapiens, GI310129614, Length=188, Percent_Identity=35.6382978723404, Blast_Score=102, Evalue=2e-22, Organism=Escherichia coli, GI1786970, Length=246, Percent_Identity=39.0243902439024, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI1786857, Length=217, Percent_Identity=25.3456221198157, Blast_Score=68, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6322697, Length=254, Percent_Identity=38.5826771653543, Blast_Score=168, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6320183, Length=278, Percent_Identity=24.8201438848921, Blast_Score=104, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6324516, Length=271, Percent_Identity=25.4612546125461, Blast_Score=102, Evalue=4e-23, Organism=Drosophila melanogaster, GI24646216, Length=251, Percent_Identity=37.8486055776892, Blast_Score=174, Evalue=5e-44, Organism=Drosophila melanogaster, GI85725270, Length=247, Percent_Identity=40.080971659919, Blast_Score=171, Evalue=3e-43, Organism=Drosophila melanogaster, GI85725272, Length=247, Percent_Identity=40.080971659919, Blast_Score=171, Evalue=3e-43, Organism=Drosophila melanogaster, GI24650981, Length=247, Percent_Identity=40.080971659919, Blast_Score=171, Evalue=3e-43, Organism=Drosophila melanogaster, GI24648979, Length=245, Percent_Identity=26.1224489795918, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI28571817, Length=245, Percent_Identity=26.1224489795918, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI28571815, Length=245, Percent_Identity=26.1224489795918, Blast_Score=105, Evalue=2e-23,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_PARUW (Q6MEW4)
Other databases:
- EMBL: BX908798 - RefSeq: YP_007160.1 - ProteinModelPortal: Q6MEW4 - SMR: Q6MEW4 - STRING: Q6MEW4 - GeneID: 2780459 - GenomeReviews: BX908798_GR - KEGG: pcu:pc0161 - NMPDR: fig|264201.1.peg.161 - eggNOG: COG0588 - HOGENOM: HBG658938 - OMA: IRTLWFV - PhylomeDB: Q6MEW4 - ProtClustDB: PRK01112 - BioCyc: CPRO264201:PC0161-MONOMER - BioCyc: PCHL-E25-01:PCHL-E25-01-000161-MONOMER - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 25683; Mature: 25683
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 182-182
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKLILMRHGQSQWNLANLFTGWVDIPLSFKGIEEAIEAGKQIKNYPIDLIFTSSLIRAQ CEEEEEEECCCCCCCHHHHHHCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH MTAMLAMSVHTSGKVPVILHTGEGRLEEWASIYSSESQSQTIPVIRAWELNERMYGELQG HHHHHHHEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHCC INKEEMAKKYGAEQVHIWRRSFDVPPPNGESLQMTAARTIPYFENTIVPHLKEKKNIFIA CCHHHHHHHHCCCEEEEEHHHCCCCCCCCCEEEEEEEECCCCHHCCCCCCCCCCCCEEEE AHGNSLRSIIMKLDGLTTDQVVKLELATGVPVIYDFNHDEYIKQQK ECCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCHHHHHCCC >Mature Secondary Structure MVKLILMRHGQSQWNLANLFTGWVDIPLSFKGIEEAIEAGKQIKNYPIDLIFTSSLIRAQ CEEEEEEECCCCCCCHHHHHHCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH MTAMLAMSVHTSGKVPVILHTGEGRLEEWASIYSSESQSQTIPVIRAWELNERMYGELQG HHHHHHHEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHCC INKEEMAKKYGAEQVHIWRRSFDVPPPNGESLQMTAARTIPYFENTIVPHLKEKKNIFIA CCHHHHHHHHCCCEEEEEHHHCCCCCCCCCEEEEEEEECCCCHHCCCCCCCCCCCCEEEE AHGNSLRSIIMKLDGLTTDQVVKLELATGVPVIYDFNHDEYIKQQK ECCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA