| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445792
Identifier: 46445792
GI number: 46445792
Start: 236401
End: 238191
Strand: Reverse
Name: 46445792
Synonym: pc0158
Alternate gene names: NA
Gene position: 238191-236401 (Counterclockwise)
Preceding gene: 46445793
Following gene: 46445789
Centisome position: 9.87
GC content: 33.28
Gene sequence:
>1791_bases GTGATGAAAAACGAAGATGGCAAAAATCAAATTCCCCCTCATTCTTTGTCTCATGTTGTTGATATCCTAAAGACTGCAAT TAAGAAAATCGATATTTTTACACAACCTGAAGCGTCTAGTTTAGAAGTCAAAGAGGACGGAAGTTTAATTGCGAAGAAAA AAAACCGCCTCGAAAAATTTCTAGGGTTTGCAAAGTCTTTTATGGGGCCCTTATTGTTTGCAACAATACGCCATCAACAA GAAAAAAAACTATATGATCTCAAGCAACAAATTTTGCAAGCAAGAGACGTTTTACAAAGTCACTCCTCATTAATTGAAAA ATTAAAAACTGGAGATTCCTCACAGCAAAAGCTAGCCAATTCCGCTTTAGAAGCCATCCAACGTTATAATTCAATTTTAA AAAAAGATTATAAATCTTTAGCAAGATATGACTTCTATAATTATGAGCGTAATAATCTTTTATCCGATAAAGAAATTAAA GGACAACTGATTCAATTGCCTCATACCGTTTCTATTAAATACGACGCAAGTGTTTATTCCGATAAAACTAAAACAACTTT GAAAGAATTAGGAATAGCATTTCAAGCTAACTCTTTTAAAAAAACGCATGCCGTTAAGCAAACTACGCATAAAAAAGCTG AACAATTCATGCTTGATACATTTCGCATGAAGGCGATTCGGATGATACAATCGCATCTTCCGCAATCCTATTCAACTGCT GAAATTTTACAACTCATTACTCAAAGCCCTATTAACTTGGAATTGGAAAATGATCTTGTATTAATAAGACAGCAATTAAC TATAGGTCCAGGGTCTATTATTATATTATTTGGATCATTTAAGCAGTCTTCCGATTTAATGAGCATGCCTATTATTGATC ATATTCAACTCTCTTCGGAATCCACACATTCCGGGTTTCCCTATCCTTCTCAACACTGTGGATGGGCGTTAATAGATGAG TTAGTGCATGCCTATACTCTGAGAACAGAGCAAATCCCCTTATATAGACAAATTGAATCTCGCAAAAAAAAACTTTCCCA ACTCTTATTATTTGATCCTGATTATATTGCTAAAAGCTATCAACAATTCAAACTCAAGCGAGAAAATTTTGATAAAAATA AAGCGATTATTTTACCTTTGCATAGGCAATTACAAGAAGCTATTTTAAAAGGTTGTTTTCTATTTACCGAAAACAACAAA AAAATACTCTCCATTTTTTATGAAAAAATTCATTCGTCTGTTTCTCCTTTCGATCTTCTCACATCTCTTCAAGAAGAAAT TACAAGGAAATTTATTCAATATCCAGCTAAGCTACTGGAAGACGAGTGGTTAGAAGGCAATCAAACTCTTCTTCGTAAAG GAACTCCAGCTGAAAGATTCCAACAAGCTAAGACCATCCTAGAAACAAGCCGAGAACAAATGATTTCTGATATTTCAGAT TTAGAAGAAAATGACATATCAGCTTATATCCGTCTTATCGGTTCGGCGCTTGGCAAAGCCTCTCAAAATATTCTTCTACA ATACTTTTCTGAAAAAATCGGTTACGCCCCTCCTATGCTTAGCGATTTTGAAAGAAAGGTTCAGCTTTGTGCGTTCGAAC AATTATTAGTTTTTCTTGATGATATGGAAAAACCTATTGACCCAACTACTGATTTTATTCAAGATTTGATACAAAAAACT CAAAAAGATTTGGCAATTTTTACACAAACAATAGATGAATTACCCGCGGAAGCTTTAATTAATGAGTTAGAAATTTATTT TAATTCTAGATATAATAGTATAGTTAAATAA
Upstream 100 bases:
>100_bases TTAATCTAATATTTATAGATTGCCTCTATTTTTATTTTCATTTATCAAAATTTTTTTAAAAATTAATTTCCAAATGAAAA GTTTAACGGACCGACCATAC
Downstream 100 bases:
>100_bases AACTAAAATTTATTATAAAAATAATTCTATGTTTTCTTCTAATCTAAGGAAATCCTCTTAAAAACTCTCAGCAATAATGT ATTAAAACTATGGCTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MMKNEDGKNQIPPHSLSHVVDILKTAIKKIDIFTQPEASSLEVKEDGSLIAKKKNRLEKFLGFAKSFMGPLLFATIRHQQ EKKLYDLKQQILQARDVLQSHSSLIEKLKTGDSSQQKLANSALEAIQRYNSILKKDYKSLARYDFYNYERNNLLSDKEIK GQLIQLPHTVSIKYDASVYSDKTKTTLKELGIAFQANSFKKTHAVKQTTHKKAEQFMLDTFRMKAIRMIQSHLPQSYSTA EILQLITQSPINLELENDLVLIRQQLTIGPGSIIILFGSFKQSSDLMSMPIIDHIQLSSESTHSGFPYPSQHCGWALIDE LVHAYTLRTEQIPLYRQIESRKKKLSQLLLFDPDYIAKSYQQFKLKRENFDKNKAIILPLHRQLQEAILKGCFLFTENNK KILSIFYEKIHSSVSPFDLLTSLQEEITRKFIQYPAKLLEDEWLEGNQTLLRKGTPAERFQQAKTILETSREQMISDISD LEENDISAYIRLIGSALGKASQNILLQYFSEKIGYAPPMLSDFERKVQLCAFEQLLVFLDDMEKPIDPTTDFIQDLIQKT QKDLAIFTQTIDELPAEALINELEIYFNSRYNSIVK
Sequences:
>Translated_596_residues MMKNEDGKNQIPPHSLSHVVDILKTAIKKIDIFTQPEASSLEVKEDGSLIAKKKNRLEKFLGFAKSFMGPLLFATIRHQQ EKKLYDLKQQILQARDVLQSHSSLIEKLKTGDSSQQKLANSALEAIQRYNSILKKDYKSLARYDFYNYERNNLLSDKEIK GQLIQLPHTVSIKYDASVYSDKTKTTLKELGIAFQANSFKKTHAVKQTTHKKAEQFMLDTFRMKAIRMIQSHLPQSYSTA EILQLITQSPINLELENDLVLIRQQLTIGPGSIIILFGSFKQSSDLMSMPIIDHIQLSSESTHSGFPYPSQHCGWALIDE LVHAYTLRTEQIPLYRQIESRKKKLSQLLLFDPDYIAKSYQQFKLKRENFDKNKAIILPLHRQLQEAILKGCFLFTENNK KILSIFYEKIHSSVSPFDLLTSLQEEITRKFIQYPAKLLEDEWLEGNQTLLRKGTPAERFQQAKTILETSREQMISDISD LEENDISAYIRLIGSALGKASQNILLQYFSEKIGYAPPMLSDFERKVQLCAFEQLLVFLDDMEKPIDPTTDFIQDLIQKT QKDLAIFTQTIDELPAEALINELEIYFNSRYNSIVK >Mature_596_residues MMKNEDGKNQIPPHSLSHVVDILKTAIKKIDIFTQPEASSLEVKEDGSLIAKKKNRLEKFLGFAKSFMGPLLFATIRHQQ EKKLYDLKQQILQARDVLQSHSSLIEKLKTGDSSQQKLANSALEAIQRYNSILKKDYKSLARYDFYNYERNNLLSDKEIK GQLIQLPHTVSIKYDASVYSDKTKTTLKELGIAFQANSFKKTHAVKQTTHKKAEQFMLDTFRMKAIRMIQSHLPQSYSTA EILQLITQSPINLELENDLVLIRQQLTIGPGSIIILFGSFKQSSDLMSMPIIDHIQLSSESTHSGFPYPSQHCGWALIDE LVHAYTLRTEQIPLYRQIESRKKKLSQLLLFDPDYIAKSYQQFKLKRENFDKNKAIILPLHRQLQEAILKGCFLFTENNK KILSIFYEKIHSSVSPFDLLTSLQEEITRKFIQYPAKLLEDEWLEGNQTLLRKGTPAERFQQAKTILETSREQMISDISD LEENDISAYIRLIGSALGKASQNILLQYFSEKIGYAPPMLSDFERKVQLCAFEQLLVFLDDMEKPIDPTTDFIQDLIQKT QKDLAIFTQTIDELPAEALINELEIYFNSRYNSIVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68694; Mature: 68694
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKNEDGKNQIPPHSLSHVVDILKTAIKKIDIFTQPEASSLEVKEDGSLIAKKKNRLEKF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHH LGFAKSFMGPLLFATIRHQQEKKLYDLKQQILQARDVLQSHSSLIEKLKTGDSSQQKLAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SALEAIQRYNSILKKDYKSLARYDFYNYERNNLLSDKEIKGQLIQLPHTVSIKYDASVYS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHEECCCEEEEEECCHHHC DKTKTTLKELGIAFQANSFKKTHAVKQTTHKKAEQFMLDTFRMKAIRMIQSHLPQSYSTA CHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EILQLITQSPINLELENDLVLIRQQLTIGPGSIIILFGSFKQSSDLMSMPIIDHIQLSSE HHHHHHHCCCCCEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCHHCCCHHHHCCCCC STHSGFPYPSQHCGWALIDELVHAYTLRTEQIPLYRQIESRKKKLSQLLLFDPDYIAKSY CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH QQFKLKRENFDKNKAIILPLHRQLQEAILKGCFLFTENNKKILSIFYEKIHSSVSPFDLL HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCHHHHH TSLQEEITRKFIQYPAKLLEDEWLEGNQTLLRKGTPAERFQQAKTILETSREQMISDISD HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LEENDISAYIRLIGSALGKASQNILLQYFSEKIGYAPPMLSDFERKVQLCAFEQLLVFLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DMEKPIDPTTDFIQDLIQKTQKDLAIFTQTIDELPAEALINELEIYFNSRYNSIVK HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHCC >Mature Secondary Structure MMKNEDGKNQIPPHSLSHVVDILKTAIKKIDIFTQPEASSLEVKEDGSLIAKKKNRLEKF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHH LGFAKSFMGPLLFATIRHQQEKKLYDLKQQILQARDVLQSHSSLIEKLKTGDSSQQKLAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SALEAIQRYNSILKKDYKSLARYDFYNYERNNLLSDKEIKGQLIQLPHTVSIKYDASVYS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHEECCCEEEEEECCHHHC DKTKTTLKELGIAFQANSFKKTHAVKQTTHKKAEQFMLDTFRMKAIRMIQSHLPQSYSTA CHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EILQLITQSPINLELENDLVLIRQQLTIGPGSIIILFGSFKQSSDLMSMPIIDHIQLSSE HHHHHHHCCCCCEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCHHCCCHHHHCCCCC STHSGFPYPSQHCGWALIDELVHAYTLRTEQIPLYRQIESRKKKLSQLLLFDPDYIAKSY CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH QQFKLKRENFDKNKAIILPLHRQLQEAILKGCFLFTENNKKILSIFYEKIHSSVSPFDLL HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCHHHHH TSLQEEITRKFIQYPAKLLEDEWLEGNQTLLRKGTPAERFQQAKTILETSREQMISDISD HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LEENDISAYIRLIGSALGKASQNILLQYFSEKIGYAPPMLSDFERKVQLCAFEQLLVFLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DMEKPIDPTTDFIQDLIQKTQKDLAIFTQTIDELPAEALINELEIYFNSRYNSIVK HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA