| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445738
Identifier: 46445738
GI number: 46445738
Start: 168921
End: 169613
Strand: Reverse
Name: 46445738
Synonym: pc0104
Alternate gene names: NA
Gene position: 169613-168921 (Counterclockwise)
Preceding gene: 46445739
Following gene: 46445737
Centisome position: 7.02
GC content: 33.62
Gene sequence:
>693_bases ATGACTTTATTTTTTACTCTTTTTCCCCTTTACTTGTTTGGAAATGTGCATTGTTTAGGAATGTGCGGTCCTTTAGTCCT GTTACTTGGAAAACATCATCATCGATATTTTTACTTCATAGGTAGAATCCTTTCTTTTAGTTTAGCAGGCTTAGTTGCAG GAGAGGCTGGAGCAGTCACTCAAATTTTTCTCAAAGACTACTATTTGGCAGAAATTATAAGTATTTTTTTTGGAGTCTTG ATTATCTATTGGGGACTAAACTTGTTATTTAATTGGAATTTTTTTAAAAGTATCACGCAATGGAATTTATTACAGACAAT CAATTTGACTCTTTCTCAACTGATGTTGAAAAATAATTGGAAAGCGACCTTTTTTTTTGGTTTTTTTACAGTGATGTTAC CTTGCGGTCAAACCCTCGTTGTTTTTTCAGCTTGTGCTTTAACGGGAGATGCATTCATTGGCCTAGGAAATGGATTTGCC TTTGCTATTTTAACAACACCTTCGCTTGTTTTGGCTATGCATACTTATAAATTTTTTAACCAACTAAAGCAATATTCCAA TATTATTTTAGGATTAAGCTCGATTTTCGTCGGAATTTTAGCTTGTTGTAGAGGATTTGCAGAACTGGGGTGGATTTCAC ATTTTGTCTTAAATCCTGACTCTTCACCCCTTTATCATATAGTGATTTTCTAA
Upstream 100 bases:
>100_bases CGGGTTTAGACATGGCCCGTATTCAAAAAGTACGCTATGATTCGCTTCAAGATAAACAAACATCTATAAATGATCCTGTT TTTCTTCATCACGAACAATA
Downstream 100 bases:
>100_bases TGAATAAAGAGCCTATTAGTTTATATATCTTCCGATTTATCTTAGGGTTTGGGTTATTCGCGTTCATGGCTATGTTGTAT TGGTCATCTGCTCTGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTLFFTLFPLYLFGNVHCLGMCGPLVLLLGKHHHRYFYFIGRILSFSLAGLVAGEAGAVTQIFLKDYYLAEIISIFFGVL IIYWGLNLLFNWNFFKSITQWNLLQTINLTLSQLMLKNNWKATFFFGFFTVMLPCGQTLVVFSACALTGDAFIGLGNGFA FAILTTPSLVLAMHTYKFFNQLKQYSNIILGLSSIFVGILACCRGFAELGWISHFVLNPDSSPLYHIVIF
Sequences:
>Translated_230_residues MTLFFTLFPLYLFGNVHCLGMCGPLVLLLGKHHHRYFYFIGRILSFSLAGLVAGEAGAVTQIFLKDYYLAEIISIFFGVL IIYWGLNLLFNWNFFKSITQWNLLQTINLTLSQLMLKNNWKATFFFGFFTVMLPCGQTLVVFSACALTGDAFIGLGNGFA FAILTTPSLVLAMHTYKFFNQLKQYSNIILGLSSIFVGILACCRGFAELGWISHFVLNPDSSPLYHIVIF >Mature_229_residues TLFFTLFPLYLFGNVHCLGMCGPLVLLLGKHHHRYFYFIGRILSFSLAGLVAGEAGAVTQIFLKDYYLAEIISIFFGVLI IYWGLNLLFNWNFFKSITQWNLLQTINLTLSQLMLKNNWKATFFFGFFTVMLPCGQTLVVFSACALTGDAFIGLGNGFAF AILTTPSLVLAMHTYKFFNQLKQYSNIILGLSSIFVGILACCRGFAELGWISHFVLNPDSSPLYHIVIF
Specific function: Unknown
COG id: COG2836
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25943; Mature: 25812
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFFTLFPLYLFGNVHCLGMCGPLVLLLGKHHHRYFYFIGRILSFSLAGLVAGEAGAVT CCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH QIFLKDYYLAEIISIFFGVLIIYWGLNLLFNWNFFKSITQWNLLQTINLTLSQLMLKNNW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC KATFFFGFFTVMLPCGQTLVVFSACALTGDAFIGLGNGFAFAILTTPSLVLAMHTYKFFN CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHH QLKQYSNIILGLSSIFVGILACCRGFAELGWISHFVLNPDSSPLYHIVIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEC >Mature Secondary Structure TLFFTLFPLYLFGNVHCLGMCGPLVLLLGKHHHRYFYFIGRILSFSLAGLVAGEAGAVT CHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH QIFLKDYYLAEIISIFFGVLIIYWGLNLLFNWNFFKSITQWNLLQTINLTLSQLMLKNNW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC KATFFFGFFTVMLPCGQTLVVFSACALTGDAFIGLGNGFAFAILTTPSLVLAMHTYKFFN CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHH QLKQYSNIILGLSSIFVGILACCRGFAELGWISHFVLNPDSSPLYHIVIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA