Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445732

Identifier: 46445732

GI number: 46445732

Start: 160575

End: 161306

Strand: Direct

Name: 46445732

Synonym: pc0098

Alternate gene names: NA

Gene position: 160575-161306 (Clockwise)

Preceding gene: 46445729

Following gene: 46445733

Centisome position: 6.65

GC content: 34.29

Gene sequence:

>732_bases
ATGCCGACTTTTACATTCAATGACCTAAATTGTTCTAACAAGCGAAAAAAATCACTTATGCTGACGATTTTACGTTTATT
TGGCCGTTCTCCGTTTGCCCCTTTGCAATCTCATATGGAAACTGTTGCTTGTTGCGTCCATCAATTGCCATTTCTTTATG
AGGCAATTGAAAATCGTGATCAACCATTAATTGAGAATATTGCCAATGAAATATCGGCAATTGAGCATCAGGCTGACACG
ATGAAAAATGATATTCGTAATCATCTTCCAAAAAGTTTATACCTTCCGATTGGCCGTGAAAGTTTATTAGATATTTTATC
GATCCAAGATAGTATCGCGGATACTGTTGAAGATATCGCAGTAGTCGCTACTTTTAAACCCTTAGAAATTCTACCAAGTT
TTAAAGAAGAGTTTAAGCAATTTTTGCTCAAAAATATTGAAACATTTGATGGAGCTAAGCTTATTATCAATGAATTACAT
GAATTGATTGAATCTTCCTTTGGAGGAAAAGAAGCTGAAAAGGTTAGAGCAATGGTGGAAGACGTGGCTTTAAAAGAACA
TGAGGTTGATCTTATTCAAAGGCAATTATTAAAAAAAATATTTCAGTCCGAAGAAGCGTTGACTTATCTTACTTTTAGTC
AATGGCAACGCTTAATTGAAAGTTTAGCGTCAATTTCTAACCTTTCAGAAAACTTGGCAAATCGCGTTAGAATGGTTTTA
GAATTGAAATAA

Upstream 100 bases:

>100_bases
AAATAATAAATGAGAGAGATTAGAAGTTTTGATAAAAGGGAATTTCCCTCGATTTAGAATTCAAAATCATCTATACTTGT
ATAGGTAAGTCATTTAATCA

Downstream 100 bases:

>100_bases
ATCTTATGACCATTTGTTGCTAAAGGAATAAGTAAGAGATTCAATAAGGAGTTATGGATACTGCGCTACTCATTTTGATT
TTGATCACCGGATTTTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MPTFTFNDLNCSNKRKKSLMLTILRLFGRSPFAPLQSHMETVACCVHQLPFLYEAIENRDQPLIENIANEISAIEHQADT
MKNDIRNHLPKSLYLPIGRESLLDILSIQDSIADTVEDIAVVATFKPLEILPSFKEEFKQFLLKNIETFDGAKLIINELH
ELIESSFGGKEAEKVRAMVEDVALKEHEVDLIQRQLLKKIFQSEEALTYLTFSQWQRLIESLASISNLSENLANRVRMVL
ELK

Sequences:

>Translated_243_residues
MPTFTFNDLNCSNKRKKSLMLTILRLFGRSPFAPLQSHMETVACCVHQLPFLYEAIENRDQPLIENIANEISAIEHQADT
MKNDIRNHLPKSLYLPIGRESLLDILSIQDSIADTVEDIAVVATFKPLEILPSFKEEFKQFLLKNIETFDGAKLIINELH
ELIESSFGGKEAEKVRAMVEDVALKEHEVDLIQRQLLKKIFQSEEALTYLTFSQWQRLIESLASISNLSENLANRVRMVL
ELK
>Mature_242_residues
PTFTFNDLNCSNKRKKSLMLTILRLFGRSPFAPLQSHMETVACCVHQLPFLYEAIENRDQPLIENIANEISAIEHQADTM
KNDIRNHLPKSLYLPIGRESLLDILSIQDSIADTVEDIAVVATFKPLEILPSFKEEFKQFLLKNIETFDGAKLIINELHE
LIESSFGGKEAEKVRAMVEDVALKEHEVDLIQRQLLKKIFQSEEALTYLTFSQWQRLIESLASISNLSENLANRVRMVLE
LK

Specific function: Unknown

COG id: COG1392

COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0111 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002727
- InterPro:   IPR018445 [H]

Pfam domain/function: PF01865 PhoU_div [H]

EC number: NA

Molecular weight: Translated: 27872; Mature: 27740

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFTFNDLNCSNKRKKSLMLTILRLFGRSPFAPLQSHMETVACCVHQLPFLYEAIENRD
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QPLIENIANEISAIEHQADTMKNDIRNHLPKSLYLPIGRESLLDILSIQDSIADTVEDIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VVATFKPLEILPSFKEEFKQFLLKNIETFDGAKLIINELHELIESSFGGKEAEKVRAMVE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DVALKEHEVDLIQRQLLKKIFQSEEALTYLTFSQWQRLIESLASISNLSENLANRVRMVL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELK
HCC
>Mature Secondary Structure 
PTFTFNDLNCSNKRKKSLMLTILRLFGRSPFAPLQSHMETVACCVHQLPFLYEAIENRD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QPLIENIANEISAIEHQADTMKNDIRNHLPKSLYLPIGRESLLDILSIQDSIADTVEDIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VVATFKPLEILPSFKEEFKQFLLKNIETFDGAKLIINELHELIESSFGGKEAEKVRAMVE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DVALKEHEVDLIQRQLLKKIFQSEEALTYLTFSQWQRLIESLASISNLSENLANRVRMVL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]