| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46445710
Identifier: 46445710
GI number: 46445710
Start: 134284
End: 135036
Strand: Reverse
Name: 46445710
Synonym: pc0076
Alternate gene names: NA
Gene position: 135036-134284 (Counterclockwise)
Preceding gene: 46445716
Following gene: 46445708
Centisome position: 5.59
GC content: 32.93
Gene sequence:
>753_bases GTGATACTTATGAATAAAAAAACGACATTTTCTCCTTTTCAATCACCAAGCTTATCTGATGATTGGGTTGATCATCCTTT AATTTTGTGGATATCTGATCGCAAACATTTTTTTTTATGGGGATTATTGGGCTTATTTGTCGCTTTGCTTTTTATCTACC GTTTTTTATCTTTACAAACATTAAACGCTGAAAACGACTTTATACAAGCTGCGAATGCTTTTCAACAAATTGAACAAAAT ACAAGCTCTTCCGACATTAAAAAAACTCATATTCAAGAGCTATTAGCTATTATGGCTCGCCATCCTGAACTCCATGCTAA ATATGATGGTGCTTTAGCCCAATATTTCATTATTCAAAATCAACCATCAGATGCAAAACGGTTAGCTAAATCAACGTTTG AACGAGTAAAACCTGATCAACTAAATTTATATGTAAATTACGCAAAAACCTCATTACTCATTAGTGAAGGATCTTACAAA GAAGCATTAATGCAAGCGAATGAACTACAAAAACAATTATCCCTAATTCCTGAAAATGTTGTGCTTTCTGTCTATAATCT AATTCGATTAGCCCTTTTATATGAGCAATTGGACCAAGCTTCAGAAGCAGTTGCCACTTGGGATCAATTACTCGCACTCA ATCGAAATAAAGATTTTTTGGAAGCTGAACTCGTCACAACAAAATTATTTCAAGCAGGGCAAATAAATTTAGAACAATTT GTTGAAGGAAGAAAAAACCAACAAAAATCATAA
Upstream 100 bases:
>100_bases TTAATCAAAAAGATTATCTATAAGAATTTACGCTTTGCATGTGCAGAAAAGGTTGTTAACAAATTTTTTCACAACAGTTC GTTAAACAAAATTTAAACCA
Downstream 100 bases:
>100_bases ATTAAAAAATTAACATTTATCAAAAACAATACTTTGGATGAAGCAAACTTGCAGATTTAATCTTTATTTGATAAATGAAA ATAATAATTATTATTTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MILMNKKTTFSPFQSPSLSDDWVDHPLILWISDRKHFFLWGLLGLFVALLFIYRFLSLQTLNAENDFIQAANAFQQIEQN TSSSDIKKTHIQELLAIMARHPELHAKYDGALAQYFIIQNQPSDAKRLAKSTFERVKPDQLNLYVNYAKTSLLISEGSYK EALMQANELQKQLSLIPENVVLSVYNLIRLALLYEQLDQASEAVATWDQLLALNRNKDFLEAELVTTKLFQAGQINLEQF VEGRKNQQKS
Sequences:
>Translated_250_residues MILMNKKTTFSPFQSPSLSDDWVDHPLILWISDRKHFFLWGLLGLFVALLFIYRFLSLQTLNAENDFIQAANAFQQIEQN TSSSDIKKTHIQELLAIMARHPELHAKYDGALAQYFIIQNQPSDAKRLAKSTFERVKPDQLNLYVNYAKTSLLISEGSYK EALMQANELQKQLSLIPENVVLSVYNLIRLALLYEQLDQASEAVATWDQLLALNRNKDFLEAELVTTKLFQAGQINLEQF VEGRKNQQKS >Mature_250_residues MILMNKKTTFSPFQSPSLSDDWVDHPLILWISDRKHFFLWGLLGLFVALLFIYRFLSLQTLNAENDFIQAANAFQQIEQN TSSSDIKKTHIQELLAIMARHPELHAKYDGALAQYFIIQNQPSDAKRLAKSTFERVKPDQLNLYVNYAKTSLLISEGSYK EALMQANELQKQLSLIPENVVLSVYNLIRLALLYEQLDQASEAVATWDQLLALNRNKDFLEAELVTTKLFQAGQINLEQF VEGRKNQQKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28754; Mature: 28754
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILMNKKTTFSPFQSPSLSDDWVDHPLILWISDRKHFFLWGLLGLFVALLFIYRFLSLQT CEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LNAENDFIQAANAFQQIEQNTSSSDIKKTHIQELLAIMARHPELHAKYDGALAQYFIIQN CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHEEEEEEEC QPSDAKRLAKSTFERVKPDQLNLYVNYAKTSLLISEGSYKEALMQANELQKQLSLIPENV CCHHHHHHHHHHHHHCCCCCEEEEEEEHHHEEEECCCCHHHHHHHHHHHHHHHHHCCHHH VLSVYNLIRLALLYEQLDQASEAVATWDQLLALNRNKDFLEAELVTTKLFQAGQINLEQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH VEGRKNQQKS HCCCCCCCCC >Mature Secondary Structure MILMNKKTTFSPFQSPSLSDDWVDHPLILWISDRKHFFLWGLLGLFVALLFIYRFLSLQT CEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LNAENDFIQAANAFQQIEQNTSSSDIKKTHIQELLAIMARHPELHAKYDGALAQYFIIQN CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHEEEEEEEC QPSDAKRLAKSTFERVKPDQLNLYVNYAKTSLLISEGSYKEALMQANELQKQLSLIPENV CCHHHHHHHHHHHHHCCCCCEEEEEEEHHHEEEECCCCHHHHHHHHHHHHHHHHHCCHHH VLSVYNLIRLALLYEQLDQASEAVATWDQLLALNRNKDFLEAELVTTKLFQAGQINLEQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH VEGRKNQQKS HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA