| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445681
Identifier: 46445681
GI number: 46445681
Start: 85064
End: 85369
Strand: Direct
Name: 46445681
Synonym: pc0047
Alternate gene names: NA
Gene position: 85064-85369 (Clockwise)
Preceding gene: 46445673
Following gene: 46445709
Centisome position: 3.52
GC content: 42.16
Gene sequence:
>306_bases TTGAGTATTAAATCAATTTTTTTAGCAAAGAATAAGCGACGCGATAAGAATGGCTTCTGTCGGGAGCGAGCTTCGAAGGT CCTTCGAAAACAGAATGGGGATCAAGTTTTTCTTTTGATTTTGCATCTGTCGAACCATGACAGGCAAGATGGATCCAACG CGAATCCTGCATCCCCTCTGAAACGCGCTGGGTTGTGGTGCTACCTTGTAAAAAAAAATTTCTTGGGTTGTTTAATTAGA GGGAAGGGACAATTGCCTGAGCTTTTTTCGCAAACGGTAATGTGTCTTTTGGGTAAGGTGTTGTAA
Upstream 100 bases:
>100_bases TTTATTAGATTTATTTTATTGTCTGCAGCGATCGATTATACCTTTTAGCATATGCATAACAAAATCTTTCATTTTTAATT TAATCAGCTGTAATTTGTAA
Downstream 100 bases:
>100_bases GATTCCCAATGACGAGAGAATTCTTTGAAAAATCTTTAGGAACTTCATCAATAATTTAGCTATTTCTATGATACAGTTTA GCTTTTAAGGATGTCAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSIKSIFLAKNKRRDKNGFCRERASKVLRKQNGDQVFLLILHLSNHDRQDGSNANPASPLKRAGLWCYLVKKNFLGCLIR GKGQLPELFSQTVMCLLGKVL
Sequences:
>Translated_101_residues MSIKSIFLAKNKRRDKNGFCRERASKVLRKQNGDQVFLLILHLSNHDRQDGSNANPASPLKRAGLWCYLVKKNFLGCLIR GKGQLPELFSQTVMCLLGKVL >Mature_100_residues SIKSIFLAKNKRRDKNGFCRERASKVLRKQNGDQVFLLILHLSNHDRQDGSNANPASPLKRAGLWCYLVKKNFLGCLIRG KGQLPELFSQTVMCLLGKVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11443; Mature: 11312
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKSIFLAKNKRRDKNGFCRERASKVLRKQNGDQVFLLILHLSNHDRQDGSNANPASPL CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHH KRAGLWCYLVKKNFLGCLIRGKGQLPELFSQTVMCLLGKVL HHCCEEHEEEHHHHHEEEECCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SIKSIFLAKNKRRDKNGFCRERASKVLRKQNGDQVFLLILHLSNHDRQDGSNANPASPL CCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHH KRAGLWCYLVKKNFLGCLIRGKGQLPELFSQTVMCLLGKVL HHCCEEHEEEHHHHHEEEECCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA