| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445673
Identifier: 46445673
GI number: 46445673
Start: 60861
End: 61208
Strand: Direct
Name: 46445673
Synonym: pc0039
Alternate gene names: NA
Gene position: 60861-61208 (Clockwise)
Preceding gene: 46445671
Following gene: 46445681
Centisome position: 2.52
GC content: 34.2
Gene sequence:
>348_bases ATGGGTCCTGGGAATACGTCTATATTACACATTACCGTTCCTGCTTGGGCAGCTGCTGGATACATTTATGGTAAAGTTGC AAATACTTCTCCAAAAATGTGTGCCCTCATTTTTGCTGTTTCTAAAATTGCTGATGTGTCGCTTTCAATATGTCATGCTC TTTTTAGTTATAAAACAGGTTTTTGCGCGAGAGTTTCTATTAATCGTGCTTATGCAGTTACAAGTTTGATTGTAAATACA ATCACTATTATTGCCATGTATCGTTTAAAACTTATTGCTCAAACTGGTGTTGCTATATTTGCAGGATTATCTGTTTTATA TTCTATAATTAACTATAACTTTCGTTGA
Upstream 100 bases:
>100_bases TCAAGATATGCAAAAGCTATTGAACGCGGAAATATTAAAAAAATTGCTTTAATAAATTTTGATTGTTATTATTTAAAGTA TTTAAATAGAGGAAGCTACT
Downstream 100 bases:
>100_bases AAAATCGGTACTGAATTCGTTAACCATAAACAGGGCTAAAGTCATTAGGCTTTTCTGTTTGCTCTTGTATCCATTTTAAA ACTTGTTGTGAGTAAAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGPGNTSILHITVPAWAAAGYIYGKVANTSPKMCALIFAVSKIADVSLSICHALFSYKTGFCARVSINRAYAVTSLIVNT ITIIAMYRLKLIAQTGVAIFAGLSVLYSIINYNFR
Sequences:
>Translated_115_residues MGPGNTSILHITVPAWAAAGYIYGKVANTSPKMCALIFAVSKIADVSLSICHALFSYKTGFCARVSINRAYAVTSLIVNT ITIIAMYRLKLIAQTGVAIFAGLSVLYSIINYNFR >Mature_114_residues GPGNTSILHITVPAWAAAGYIYGKVANTSPKMCALIFAVSKIADVSLSICHALFSYKTGFCARVSINRAYAVTSLIVNTI TIIAMYRLKLIAQTGVAIFAGLSVLYSIINYNFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12369; Mature: 12238
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPGNTSILHITVPAWAAAGYIYGKVANTSPKMCALIFAVSKIADVSLSICHALFSYKTG CCCCCCEEEEEEECCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FCARVSINRAYAVTSLIVNTITIIAMYRLKLIAQTGVAIFAGLSVLYSIINYNFR CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GPGNTSILHITVPAWAAAGYIYGKVANTSPKMCALIFAVSKIADVSLSICHALFSYKTG CCCCCEEEEEEECCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FCARVSINRAYAVTSLIVNTITIIAMYRLKLIAQTGVAIFAGLSVLYSIINYNFR CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA