| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445670
Identifier: 46445670
GI number: 46445670
Start: 54770
End: 55351
Strand: Reverse
Name: 46445670
Synonym: pc0036
Alternate gene names: NA
Gene position: 55351-54770 (Counterclockwise)
Preceding gene: 46445672
Following gene: 46445666
Centisome position: 2.29
GC content: 37.11
Gene sequence:
>582_bases ATGCACATCGCTTATTTTTCTAAGAAAATTTTTTATGTTGGTTTACAACTAACCTTAGTAACGATCACTTCCCTTTACGG GAATTCTTTACCTTCCACGATTGTCCCTAACCCACAAAATTCTAATGCTTCTTCAGCGCCGCAAAACATTCCACGTTATG AGCGAGAAGAAATTGCTTTTGCAGATCGGAATGAAGATAAAACCCTTTATGAGAAAAATTTAAACTTAGGAAATTGGGAT TACAAAGAAAACTGGCGTTATGATAAGCAAGCTTTTTATAATGGAGAAACACAATCGGATGCCTATGATCAAAGGCATCC AGGTCTACGTGGAATAGGCTATGATGCGACTGATCGTTCAACATATCACCCTCAATATGAAAAAAATAGTAATTGCACAG CTCCTACTTATCGAGAAGGATATTATAAAAGAGCGCCTCAAGAAGATGGGAACAATTATTGTGCACAGCCTTCAAATAAA GGTTACTCAGACCAATCAGCTTACCCATACAGTACGACACAAAATTTTGACTCACGAACCAATCAATACACCAATCCCTC AGATAACTTTTATCAGCAATAA
Upstream 100 bases:
>100_bases TAAATGAAGAGAAATTACTACACTGTAAAATTTTTATTTGACATATTCATATTTAGTAGGCAAAAAAAAGTTTTTATAAA CATGATCATTTGGGGGTTTT
Downstream 100 bases:
>100_bases CCTTTATTACAACCGATAAGCATTTTAATGGCTAGTCGATGTTGAACTAACATCGACTAGCCATGCTATAAATATGCATA GGTAGTCCATGAAAGATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MHIAYFSKKIFYVGLQLTLVTITSLYGNSLPSTIVPNPQNSNASSAPQNIPRYEREEIAFADRNEDKTLYEKNLNLGNWD YKENWRYDKQAFYNGETQSDAYDQRHPGLRGIGYDATDRSTYHPQYEKNSNCTAPTYREGYYKRAPQEDGNNYCAQPSNK GYSDQSAYPYSTTQNFDSRTNQYTNPSDNFYQQ
Sequences:
>Translated_193_residues MHIAYFSKKIFYVGLQLTLVTITSLYGNSLPSTIVPNPQNSNASSAPQNIPRYEREEIAFADRNEDKTLYEKNLNLGNWD YKENWRYDKQAFYNGETQSDAYDQRHPGLRGIGYDATDRSTYHPQYEKNSNCTAPTYREGYYKRAPQEDGNNYCAQPSNK GYSDQSAYPYSTTQNFDSRTNQYTNPSDNFYQQ >Mature_193_residues MHIAYFSKKIFYVGLQLTLVTITSLYGNSLPSTIVPNPQNSNASSAPQNIPRYEREEIAFADRNEDKTLYEKNLNLGNWD YKENWRYDKQAFYNGETQSDAYDQRHPGLRGIGYDATDRSTYHPQYEKNSNCTAPTYREGYYKRAPQEDGNNYCAQPSNK GYSDQSAYPYSTTQNFDSRTNQYTNPSDNFYQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22418; Mature: 22418
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIAYFSKKIFYVGLQLTLVTITSLYGNSLPSTIVPNPQNSNASSAPQNIPRYEREEIAF CCCHHCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEE ADRNEDKTLYEKNLNLGNWDYKENWRYDKQAFYNGETQSDAYDQRHPGLRGIGYDATDRS CCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCC TYHPQYEKNSNCTAPTYREGYYKRAPQEDGNNYCAQPSNKGYSDQSAYPYSTTQNFDSRT CCCCCCCCCCCCCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC NQYTNPSDNFYQQ CCCCCCCCCCCCC >Mature Secondary Structure MHIAYFSKKIFYVGLQLTLVTITSLYGNSLPSTIVPNPQNSNASSAPQNIPRYEREEIAF CCCHHCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEE ADRNEDKTLYEKNLNLGNWDYKENWRYDKQAFYNGETQSDAYDQRHPGLRGIGYDATDRS CCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCC TYHPQYEKNSNCTAPTYREGYYKRAPQEDGNNYCAQPSNKGYSDQSAYPYSTTQNFDSRT CCCCCCCCCCCCCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC NQYTNPSDNFYQQ CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA