| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46445669
Identifier: 46445669
GI number: 46445669
Start: 54446
End: 54745
Strand: Direct
Name: 46445669
Synonym: pc0035
Alternate gene names: NA
Gene position: 54446-54745 (Clockwise)
Preceding gene: 46445668
Following gene: 46445671
Centisome position: 2.25
GC content: 38.0
Gene sequence:
>300_bases GTGGGGTTAATTAACCAATCCATTGAACAAGAACAATTAATAGAACTAAGGTATCGCTTTCACCCTAATTATTGGGGCAG AGGATTGGCAACAGAAGCCGTATTGGCTGTGTGCCAATATGCATTTGATCAATTAGGAATTAAAAAATTAATCTCAATTA TTGATCCTCAAAACTTTCGTAGCCTTGGAGTTGCTAAGCGAGCGGGATGGCTTTTTGGAAAGAAACAATCTTTCATGGAC TACCTATGCATATTTATAGCATGGCTAGTCGATGTTAGTTCAACATCGACTAGCCATTAA
Upstream 100 bases:
>100_bases CTCAAGTTTATTTGCAAAAGCGAATACTCGATCATTATACTCAATATGGATATGGTCTATATGCCGTTGAGAAAAAAAAG ATTGTCAATTTGGCGGATTT
Downstream 100 bases:
>100_bases AATGCTTATCGGTTGTAATAAAGGTTATTGCTGATAAAAGTTATCTGAGGGATTGGTGTATTGATTGGTTCGTGAGTCAA AATTTTGTGTCGTACTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MGLINQSIEQEQLIELRYRFHPNYWGRGLATEAVLAVCQYAFDQLGIKKLISIIDPQNFRSLGVAKRAGWLFGKKQSFMD YLCIFIAWLVDVSSTSTSH
Sequences:
>Translated_99_residues MGLINQSIEQEQLIELRYRFHPNYWGRGLATEAVLAVCQYAFDQLGIKKLISIIDPQNFRSLGVAKRAGWLFGKKQSFMD YLCIFIAWLVDVSSTSTSH >Mature_98_residues GLINQSIEQEQLIELRYRFHPNYWGRGLATEAVLAVCQYAFDQLGIKKLISIIDPQNFRSLGVAKRAGWLFGKKQSFMDY LCIFIAWLVDVSSTSTSH
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11343; Mature: 11212
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLINQSIEQEQLIELRYRFHPNYWGRGLATEAVLAVCQYAFDQLGIKKLISIIDPQNFR CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SLGVAKRAGWLFGKKQSFMDYLCIFIAWLVDVSSTSTSH HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GLINQSIEQEQLIELRYRFHPNYWGRGLATEAVLAVCQYAFDQLGIKKLISIIDPQNFR CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SLGVAKRAGWLFGKKQSFMDYLCIFIAWLVDVSSTSTSH HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA