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The map label for this gene is ycbL [C]

Identifier: 46445659

GI number: 46445659

Start: 36689

End: 37321

Strand: Reverse

Name: ycbL [C]

Synonym: pc0025

Alternate gene names: 46445659

Gene position: 37321-36689 (Counterclockwise)

Preceding gene: 46445660

Following gene: 46445658

Centisome position: 1.55

GC content: 38.23

Gene sequence:

>633_bases
ATGTTTATACAACCTTTTCCTTCGGGGCCTTTTTCTACTAACGCCTATCTTATTGCTTGTTTGTCTACGCAAAAAGCGAT
TATTGTTGACCCTGCTCCAGAATCAGCAAATCTTCTCCTTGATTGTCTAAGGAAACATCATTTTATCCTACAATCTATTT
TACTCACCCACTCCCATTGGGATCACATCGCTGATATCAATTCCATCAAAAAACTCTATGACATCCCCATTTATGTGCAC
CCTTTGGATCAACTGAATTTAGAAAAACCTGGTTCGGATGGTTTGCCTTGTTGGCTTACTATTCAACCTGTTAAAGCCAA
TATTTTTCTAAACGATGGAGATCTAATCCCTGTTGGTCAATTAACTTTTAAAGTCATTCACACTCCGGGACATTCTCCGG
GAAGTGTTTGCTTTTATGAAATCTCACAATCCAAATTATTATCAGGAGATACCTTATTTAAAGGATCCATTGGAAATATC
TCTTTTCCTACCAGCCAACCAGATTTAATGTGGACATCTTTGGACAAGCTAGCGCAATTACCCCCTTCTACATCTGTTTA
TCCAGGACATGGTCCCATGACAACAATTGGAAATGAGAATTGGCTTCCTAAAGCCAAACAATTATTTCAGTAA

Upstream 100 bases:

>100_bases
ATCCTAATTATAATTTCGTCTTCTTTGCACTGGTAGCTCAATTGGATAGAGTACCCGGCTACGAACCGGGCGGTTAGAGG
TTCGAATCCTCTCCGGTGCA

Downstream 100 bases:

>100_bases
AAATAATACTTAAAAAACTTTTTAAAATTTAAAACTCCTTTTTTTGCAGGATTTTATTATTAAATTTTGAAGAAATGTGG
GAACATAGGAACAGCATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MFIQPFPSGPFSTNAYLIACLSTQKAIIVDPAPESANLLLDCLRKHHFILQSILLTHSHWDHIADINSIKKLYDIPIYVH
PLDQLNLEKPGSDGLPCWLTIQPVKANIFLNDGDLIPVGQLTFKVIHTPGHSPGSVCFYEISQSKLLSGDTLFKGSIGNI
SFPTSQPDLMWTSLDKLAQLPPSTSVYPGHGPMTTIGNENWLPKAKQLFQ

Sequences:

>Translated_210_residues
MFIQPFPSGPFSTNAYLIACLSTQKAIIVDPAPESANLLLDCLRKHHFILQSILLTHSHWDHIADINSIKKLYDIPIYVH
PLDQLNLEKPGSDGLPCWLTIQPVKANIFLNDGDLIPVGQLTFKVIHTPGHSPGSVCFYEISQSKLLSGDTLFKGSIGNI
SFPTSQPDLMWTSLDKLAQLPPSTSVYPGHGPMTTIGNENWLPKAKQLFQ
>Mature_210_residues
MFIQPFPSGPFSTNAYLIACLSTQKAIIVDPAPESANLLLDCLRKHHFILQSILLTHSHWDHIADINSIKKLYDIPIYVH
PLDQLNLEKPGSDGLPCWLTIQPVKANIFLNDGDLIPVGQLTFKVIHTPGHSPGSVCFYEISQSKLLSGDTLFKGSIGNI
SFPTSQPDLMWTSLDKLAQLPPSTSVYPGHGPMTTIGNENWLPKAKQLFQ

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=203, Percent_Identity=33.4975369458128, Blast_Score=117, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17538952, Length=194, Percent_Identity=29.8969072164948, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21356335, Length=182, Percent_Identity=29.6703296703297, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24667703, Length=182, Percent_Identity=29.6703296703297, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24667711, Length=182, Percent_Identity=29.6703296703297, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI221330176, Length=205, Percent_Identity=25.8536585365854, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23210; Mature: 23210

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQPFPSGPFSTNAYLIACLSTQKAIIVDPAPESANLLLDCLRKHHFILQSILLTHSHW
CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
DHIADINSIKKLYDIPIYVHPLDQLNLEKPGSDGLPCWLTIQPVKANIFLNDGDLIPVGQ
HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEECC
LTFKVIHTPGHSPGSVCFYEISQSKLLSGDTLFKGSIGNISFPTSQPDLMWTSLDKLAQL
EEEEEEECCCCCCCCEEEEEECCCEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHC
PPSTSVYPGHGPMTTIGNENWLPKAKQLFQ
CCCCCEECCCCCEEECCCCCCCCHHHHHCC
>Mature Secondary Structure
MFIQPFPSGPFSTNAYLIACLSTQKAIIVDPAPESANLLLDCLRKHHFILQSILLTHSHW
CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
DHIADINSIKKLYDIPIYVHPLDQLNLEKPGSDGLPCWLTIQPVKANIFLNDGDLIPVGQ
HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEECC
LTFKVIHTPGHSPGSVCFYEISQSKLLSGDTLFKGSIGNISFPTSQPDLMWTSLDKLAQL
EEEEEEECCCCCCCCEEEEEECCCEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHC
PPSTSVYPGHGPMTTIGNENWLPKAKQLFQ
CCCCCEECCCCCEEECCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]