Click here to switch to the map view.

The map label for this gene is ygeD [C]

Identifier: 46445641

GI number: 46445641

Start: 9395

End: 11098

Strand: Reverse

Name: ygeD [C]

Synonym: pc0007

Alternate gene names: 46445641

Gene position: 11098-9395 (Counterclockwise)

Preceding gene: 46445646

Following gene: 46445640

Centisome position: 0.46

GC content: 34.62

Gene sequence:

>1704_bases
TTGATTGTTTATTTTTTCATTCAATTAGAAGGAATGGAGTATAGTCACCAGATTCTAGCCTCAACCGGTGCTACCTTTGT
CATCCCTTTTTTACTATTTTCGGCGCTTTCAGGAACTTTGGCAGATCGTTTCAGCAAACGAGATATCATCGTTACAACAA
AAATTTTAGAACTGGTAATTATGGCTCTTGGGGTATGCGCTTTTGCTTTTCAAAGCAAATGGGGTTCTTATGCAATTTTA
TTTTTATTGGCTACCCAAAGTGCGATTTTTGGCCCCTCAAAATATGGAATTGTCCCAGAACTAGTCTCTAAAGATAAGAT
TTCTAAAGCCAACGGTTTAATGACCTCATTTACATTCCTTGCAATCATTTTAGGCACATTTTTATCTTCTTTCCTTATTC
AAATTAGTGGACGCAATTTTATTGTTTCTTCGATTTTCTGTACCTTTATTGCTTTAGTTGGTCTTGTGGCTAGTTTTTGT
ATTGAACATACACCACCTGCAGGCTCCGAAAAGAAAATTCAAATTTTTTTCTTAAAACAAATTTTTCAAACCTTGAAGTT
TGCCCGCCAAGAAATTTCTTTGCTTCCAGCCATTTTAGGCGCTGCTTATTTTCTTTTTGTTGGTGCATTTACTCAACTTA
ATATTATTCCTTTTGCTGTCCAATCTCTTCAACTTTCAGATATTCAAGGCGGCTATTTATTTTTTTTAACAGCTTTGGGA
ATAGGAACAGGAGCTTTGATTGCAGGCAAAATTTCTGGAAGAATTGTAGAACTAGGGTTAGTTCCTATTGGAGCGCTTGG
TATTTCGGTATGTGCATTTTTCTTGGATATATATTCAGAAAATATCTGGGCAGTTATTCCAATTGTGACTTTACTAGGAG
TCTTTGGAGGGATTTTTGAGATTCCTCTCGACTCTTACATTCAAGTTGCTAGTCCTAAACAAATGCGAGGACAAATGGTT
GCAGCTACAAATTTTTTAAGTTTTATCGGGGTCCTTTTAGCTTCTGGGTTGATTTATCTGAATTCAGAAATTTTTCAAAT
TTCAGCTGACAAAGGATTTAGTTTAATTGGATTTATTACTTTCGGAATTTTTATTATTTTTATGTTTCAATTTTTTGATT
ATTTGACTCGCTTTATTGCCTCGATTTTATCCAAGCTGCATTTTAGTACAATATTTAAAGGCAAAGAAAATATTCCTGAT
TGCCCAGCAGTTTATGTTTGTACGCATACAGCCTGGAATGATACTTTACTCATTCTAGGGTCACAAAGGCGAAGAATTCG
GTTTTTTATTGAGCAAGAACAACATCATTCTCCTTGGTTAAGGCGTCTATACGGACTACTTCGGGTTGTCTTTATCCCTG
ATATTGAACCTCTCGAAAAGAATCAAGCTTGTTTAACTGAGATTCGCAATACTCTTAAAAAAGGAATCTCGGTATGTATT
TTTGTTCAAAGTTGGGATATTTATTCTGAAGTAGAAAAGCTCAAACACTCTACCCCTTTTAACCACATTATCGAAGAAGC
TAATTATCCGATCATTCCAGTTTACATTCAAAAAGGAATTAAATCTCCTCGTTTCCAATTTTTAACAAATTCATTAAAAA
AATTCAGGGTACCAGCTTCTGTCGTTTTTGGAGATTTAATTTACACAGGGCATCAATCTATTTTAAAAAGTAAACATGAG
CATGACCTCTATTTTGAGGATTGA

Upstream 100 bases:

>100_bases
AGAGTATATGCTAAACTCATTTTTACAACGATTTTCATCTTTTACTTATTTAAATGTAACCCAATTTTTAGGGGCTTTAA
ACGACAACATTTATAAGTTA

Downstream 100 bases:

>100_bases
TTGCCTGAATTGTTTAGCTTGAGTCTAGGAAGCATGAAGCAAAAGAAAGGACTGGAAAGAATAAGCTTTCGAAAACTCTT
TTGTGCTAAAAGGATTAATT

Product: hypothetical protein

Products: AMP; diphosphate; acyl-[acyl-carrier protein]

Alternate protein names: 2-Acyl-Glycerophospho-Ethanolamine Acyltransferase; Acylglycerophosphoethanolamine Acyltransferase; Facilitator Transporter; AMP-Dependent Synthetase And Ligase; Acyltransferase Family Protein; Transporter Facilitator Family; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Facilitator Superfamily Protein; 2-Acylglycerophosphoethanolamine Acyltransferase; Acyltransferase; Efflux Protein; Acyl-CoA Synthetase /AMP-Acid Ligase II; Long-Chain-Fatty-Acid-[Acyl-Carrier-Protein] Ligase; Facilitator Superfamily Permease; Fatty Acid Permease / Acyltransferase Fusion Protein; ATP-Dependent DsDNA/SsDNA Exodeoxyribonuclease V Gamma; MFS Permease; Acyltransferase Protein; Inner Membrane Protein YgeD; Transporter-Like Acyltransferase Protein; Acyltransferase Domain-Containing Protein; Transmembrane Protein; Efflux Protein Resistance Protein; Facilitator Superfamily Transmembrane Protein; Acyltransferase Domain Protein

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MIVYFFIQLEGMEYSHQILASTGATFVIPFLLFSALSGTLADRFSKRDIIVTTKILELVIMALGVCAFAFQSKWGSYAIL
FLLATQSAIFGPSKYGIVPELVSKDKISKANGLMTSFTFLAIILGTFLSSFLIQISGRNFIVSSIFCTFIALVGLVASFC
IEHTPPAGSEKKIQIFFLKQIFQTLKFARQEISLLPAILGAAYFLFVGAFTQLNIIPFAVQSLQLSDIQGGYLFFLTALG
IGTGALIAGKISGRIVELGLVPIGALGISVCAFFLDIYSENIWAVIPIVTLLGVFGGIFEIPLDSYIQVASPKQMRGQMV
AATNFLSFIGVLLASGLIYLNSEIFQISADKGFSLIGFITFGIFIIFMFQFFDYLTRFIASILSKLHFSTIFKGKENIPD
CPAVYVCTHTAWNDTLLILGSQRRRIRFFIEQEQHHSPWLRRLYGLLRVVFIPDIEPLEKNQACLTEIRNTLKKGISVCI
FVQSWDIYSEVEKLKHSTPFNHIIEEANYPIIPVYIQKGIKSPRFQFLTNSLKKFRVPASVVFGDLIYTGHQSILKSKHE
HDLYFED

Sequences:

>Translated_567_residues
MIVYFFIQLEGMEYSHQILASTGATFVIPFLLFSALSGTLADRFSKRDIIVTTKILELVIMALGVCAFAFQSKWGSYAIL
FLLATQSAIFGPSKYGIVPELVSKDKISKANGLMTSFTFLAIILGTFLSSFLIQISGRNFIVSSIFCTFIALVGLVASFC
IEHTPPAGSEKKIQIFFLKQIFQTLKFARQEISLLPAILGAAYFLFVGAFTQLNIIPFAVQSLQLSDIQGGYLFFLTALG
IGTGALIAGKISGRIVELGLVPIGALGISVCAFFLDIYSENIWAVIPIVTLLGVFGGIFEIPLDSYIQVASPKQMRGQMV
AATNFLSFIGVLLASGLIYLNSEIFQISADKGFSLIGFITFGIFIIFMFQFFDYLTRFIASILSKLHFSTIFKGKENIPD
CPAVYVCTHTAWNDTLLILGSQRRRIRFFIEQEQHHSPWLRRLYGLLRVVFIPDIEPLEKNQACLTEIRNTLKKGISVCI
FVQSWDIYSEVEKLKHSTPFNHIIEEANYPIIPVYIQKGIKSPRFQFLTNSLKKFRVPASVVFGDLIYTGHQSILKSKHE
HDLYFED
>Mature_567_residues
MIVYFFIQLEGMEYSHQILASTGATFVIPFLLFSALSGTLADRFSKRDIIVTTKILELVIMALGVCAFAFQSKWGSYAIL
FLLATQSAIFGPSKYGIVPELVSKDKISKANGLMTSFTFLAIILGTFLSSFLIQISGRNFIVSSIFCTFIALVGLVASFC
IEHTPPAGSEKKIQIFFLKQIFQTLKFARQEISLLPAILGAAYFLFVGAFTQLNIIPFAVQSLQLSDIQGGYLFFLTALG
IGTGALIAGKISGRIVELGLVPIGALGISVCAFFLDIYSENIWAVIPIVTLLGVFGGIFEIPLDSYIQVASPKQMRGQMV
AATNFLSFIGVLLASGLIYLNSEIFQISADKGFSLIGFITFGIFIIFMFQFFDYLTRFIASILSKLHFSTIFKGKENIPD
CPAVYVCTHTAWNDTLLILGSQRRRIRFFIEQEQHHSPWLRRLYGLLRVVFIPDIEPLEKNQACLTEIRNTLKKGISVCI
FVQSWDIYSEVEKLKHSTPFNHIIEEANYPIIPVYIQKGIKSPRFQFLTNSLKKFRVPASVVFGDLIYTGHQSILKSKHE
HDLYFED

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789200, Length=318, Percent_Identity=26.1006289308176, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 6.2.1.20; 2.3.1.40

Molecular weight: Translated: 63394; Mature: 63394

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVYFFIQLEGMEYSHQILASTGATFVIPFLLFSALSGTLADRFSKRDIIVTTKILELVI
CEEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
MALGVCAFAFQSKWGSYAILFLLATQSAIFGPSKYGIVPELVSKDKISKANGLMTSFTFL
HHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHCCHHHHHHHH
AIILGTFLSSFLIQISGRNFIVSSIFCTFIALVGLVASFCIEHTPPAGSEKKIQIFFLKQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHH
IFQTLKFARQEISLLPAILGAAYFLFVGAFTQLNIIPFAVQSLQLSDIQGGYLFFLTALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IGTGALIAGKISGRIVELGLVPIGALGISVCAFFLDIYSENIWAVIPIVTLLGVFGGIFE
CCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHH
IPLDSYIQVASPKQMRGQMVAATNFLSFIGVLLASGLIYLNSEIFQISADKGFSLIGFIT
CCCHHHEECCCCHHHHCHHHHHHHHHHHHHHHHHCCHHEECCEEEEEECCCCCHHHHHHH
FGIFIIFMFQFFDYLTRFIASILSKLHFSTIFKGKENIPDCPAVYVCTHTAWNDTLLILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEC
SQRRRIRFFIEQEQHHSPWLRRLYGLLRVVFIPDIEPLEKNQACLTEIRNTLKKGISVCI
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
FVQSWDIYSEVEKLKHSTPFNHIIEEANYPIIPVYIQKGIKSPRFQFLTNSLKKFRVPAS
EEECCCHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHCCCCCCHHHHHHHHHHHHCCCHH
VVFGDLIYTGHQSILKSKHEHDLYFED
HHHHHHHHHCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIVYFFIQLEGMEYSHQILASTGATFVIPFLLFSALSGTLADRFSKRDIIVTTKILELVI
CEEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
MALGVCAFAFQSKWGSYAILFLLATQSAIFGPSKYGIVPELVSKDKISKANGLMTSFTFL
HHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHCCHHHHHHHH
AIILGTFLSSFLIQISGRNFIVSSIFCTFIALVGLVASFCIEHTPPAGSEKKIQIFFLKQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHH
IFQTLKFARQEISLLPAILGAAYFLFVGAFTQLNIIPFAVQSLQLSDIQGGYLFFLTALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IGTGALIAGKISGRIVELGLVPIGALGISVCAFFLDIYSENIWAVIPIVTLLGVFGGIFE
CCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHH
IPLDSYIQVASPKQMRGQMVAATNFLSFIGVLLASGLIYLNSEIFQISADKGFSLIGFIT
CCCHHHEECCCCHHHHCHHHHHHHHHHHHHHHHHCCHHEECCEEEEEECCCCCHHHHHHH
FGIFIIFMFQFFDYLTRFIASILSKLHFSTIFKGKENIPDCPAVYVCTHTAWNDTLLILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEC
SQRRRIRFFIEQEQHHSPWLRRLYGLLRVVFIPDIEPLEKNQACLTEIRNTLKKGISVCI
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
FVQSWDIYSEVEKLKHSTPFNHIIEEANYPIIPVYIQKGIKSPRFQFLTNSLKKFRVPAS
EEECCCHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHCCCCCCHHHHHHHHHHHHCCCHH
VVFGDLIYTGHQSILKSKHEHDLYFED
HHHHHHHHHCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; acid; [acyl-carrier protein]

Specific reaction: ATP + an acid + [acyl-carrier protein] = AMP + diphosphate + acyl-[acyl-carrier protein]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA